Xenopus laevis (African clawed frog): 108715394
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Entry
108715394 CDS
T01010
Symbol
cdh5.S
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108715394 (cdh5.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108715394 (cdh5.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108715394 (cdh5.S)
04090 CD molecules [BR:
xla04090
]
108715394 (cdh5.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
108715394 (cdh5.S)
CD molecules [BR:
xla04090
]
Proteins
108715394 (cdh5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
Cadherin_2
DUF5673
VirB3
Motif
Other DBs
NCBI-GeneID:
108715394
NCBI-ProteinID:
XP_018115970
Xenbase:
XB-GENE-17335524
UniProt:
A0A974D0T1
A0A1L8GEW5
LinkDB
All DBs
Position
4S:39605710..39651440
Genome browser
AA seq
774 aa
AA seq
DB search
MKVQRLQFLMIMCCSLPLLLFSKEITNSESYPAKNSRRVKRGWIWNQMFIQEEQPGNLPH
YVGKLQINSSNVHENAKFAIQGESANTIFKVNERNGDIYCFERLDREKKIEYHLMALLVD
KRTNKTLEHPSNFIIKVLDINDNAPEFTQKAFNGSVNEMSDRGIFVTKVNAVDKDDPTIG
GNADVNYRIIQGQEYFTIDNNGAIYTAVPNLDREQKDTYEVLVEARDSPGRTLYLASTAI
VTIRLIDINDNFPTFTEREFKFNVPENLKVGAEVGRLKVEDIDEPQNRNTKYSFLKERFQ
EMFAVTTNAITNEGILILKKPLDYESVKQYKMDIEATDPLIDLRVARQPRPKSITNVIIN
VLDVNEPPVFSKPFYKFEISEDSKLNNIIGFVSAKDPDAANRNIRYSMRNFKDEPIKVTS
TGNIINVKTLDRETADWHNFTVVAEEVDPSNPPIKKESLGLVFIKVLDVNDNAPEFAEHY
APRVCENAAHQTVIANISATDKDEMKPGTKFTYYSAKKENNFTVQDNHDNTATILVKYGY
FNREVAKFHYLPIVISDNGQPEQSSTNTLTITVCKCNEKGEFTFCEEPAKLAAVSVPTII
IILVSLFLIILVVAILAVLRRMQKKDTNILGKNTAEIHEQLVTYDEEGGGEMDTNSYDVS
VLNSVRRNVQRPRQDMETDPYLYAHVQKPARNGDMSFMIEVKKDEADNNGEGLPYDTLHI
FGYEGSESIVESLSSIESGSSESDIDYDVLNNWGPRFKMLAELYGLEPIGDFPY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgcaaaggcttcaatttctgatgattatgtgttgctctttgcctttgctccta
ttcagcaaagagatcacaaattctgaaagctatcccgccaagaacagcaggcgtgtcaag
agaggatggatatggaatcaaatgtttattcaagaggaacaacctggaaaccttccacat
tatgtgggaaagttacagatcaattccagcaatgtacatgaaaatgccaagtttgccatc
caaggggaatctgccaatacaatttttaaggttaatgagagaaacggggacatctactgc
tttgaacgactagaccgtgaaaagaagattgaatatcacctgatggctctattggtggac
aaaagaacaaacaaaactctggagcacccttccaactttattattaaagttcttgatata
aatgacaatgcaccggagtttacacagaaagctttcaatggatctgtgaacgagatgtca
gacagaggtatttttgtgacaaaagtcaacgctgtggataaagatgatcctacaataggt
ggaaatgcagacgtgaactatagaatcatccaaggacaagagtactttacaattgataac
aatggggcaatttatactgcagtacctaatttagacagagagcagaaagatacctatgaa
gttctggtagaggccagagattctccagggcgaactctttacttggcaagcacagccata
gtgaccattcgcttgatagacattaatgacaattttccaaccttcactgagagagagttt
aagttcaatgtaccagagaacctgaaggttggggcagaagtgggaagactgaaagtagaa
gatattgacgagccacaaaacagaaacacaaagtatagtttcttgaaggaaagatttcag
gagatgtttgctgtcaccacaaatgcaatcacgaatgaaggaattttgatattgaaaaag
cccctggactacgagagtgttaaacaatataagatggacattgaagccacagatcccctt
atcgacctacgtgtggcaagacagcctagacccaagagtattacaaatgtcatcattaat
gttcttgatgtgaatgagcccccagtgttctccaaaccattctacaaatttgaaatttca
gaggattctaaattaaacaatattattggatttgtctcagcaaaagatcctgatgccgcc
aacagaaacatcagatattctatgagaaatttcaaagatgaaccaatcaaggtaacaagc
actggaaatattatcaatgtcaagacgcttgacagagagactgcagattggcacaatttt
actgtagtagctgaagaagttgatccaagtaaccctcctattaaaaaagagtcattggga
cttgttttcataaaagtgttggacgtaaatgacaatgctccagaatttgcagaacattat
gcacccagagtgtgtgaaaacgcagcccaccaaacggtcatagcaaacatttctgctact
gataaggatgaaatgaagcccggaacgaagtttacatattattcagccaaaaaagaaaac
aatttcacagtgcaagataatcacgacaacacagctacaatcctggtcaaatatggatat
tttaatagagaagtggcaaagttccattatctacctattgtgatctcggacaatggacag
ccagagcagagcagcaccaatactcttacaatcactgtgtgcaaatgcaatgaaaaagga
gaattcacattctgtgaggagcctgcaaagctggctgctgtttctgttccaacgatcatc
atcatacttgtgtctttgtttttaattattttggttgtcgccatattggcagttctaagg
agaatgcagaagaaagataccaatatcttaggaaaaaacacagcggagattcatgagcag
ctggtcacgtatgatgaggaaggtggcggagaaatggatacaaacagttatgatgtatct
gtattgaattccgtgcgcagaaatgttcaaaggcccaggcaagacatggagacagatccc
tacttgtatgctcatgtccaaaaaccagcaagaaatggagacatgtctttcatgattgaa
gtgaagaaggatgaagcagacaataatggggagggattaccatatgatacccttcacata
tttgggtatgaagggtcagaatctattgtggagtcacttagctccatagaatccgggtct
tcagaatcagacatagactatgatgtattaaataactgggggcctagatttaagatgcta
gctgaactttatggtctggaaccaattggagactttccttattag
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