Xenopus laevis (African clawed frog): 108715474
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Entry
108715474 CDS
T01010
Symbol
rfwd3.S
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108715474 (rfwd3.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108715474 (rfwd3.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108715474 (rfwd3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
WD40_CDC20-Fz
EIF3I
zf-rbx1
zf-C3HC4_2
WDR55
zf-RING_5
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
zf-RING_11
Rtf2
WD40
zf-UDP
zf-C3HC4_4
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
WD40_Prp19
zf-RING_16
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108715474
NCBI-ProteinID:
XP_018116138
Xenbase:
XB-GENE-6486399
UniProt:
A0A974CYQ5
LinkDB
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Position
4S:complement(56386851..56403145)
Genome browser
AA seq
750 aa
AA seq
DB search
MAQEEMEVDLLNLLNPMYSNRDVSTSHQPRGSGQVLFLPPPLTYSDDSEDLFLGPTEPHD
VIVLDSVEEAPGQVAAPTNALQMLHSALEQLRQAAEQRSSVRPTRVQRRSTRRHQRGGSQ
RTAGTSSRAALSNFFQINRTQGVAPTSEREERNAALRTESSRTSPGDSSDETVELSEEEE
GGGGSSTDVDEVDINAGAAPPAEPAPEELQINVIEVQAEAPESLPVPESVTLPLQIQKKQ
KTPVKQLSPVKHLPPEEDEGDTCAICFEPWTNAGQHRLSALRCGHLFGFTCIERWLKGGA
AKCPQCNKKAKRADIVVLYARTLKALDTSEQERMKSSLEMEQSMRRKAELESAQCRLQVQ
VLTDECGKLRKQIQELKMLIAQHGTSTSMQASSSRSTISGSLSSSQGQHKYSFEKAILIS
QTGSCRVMSYCESMSCLVVSQPSPQTTLIPGCGIKKLSAANLKSSQYVPIHSKQIRGLAF
SNRSDGLLLSAALDNTIKLTSLMTNTVVQTYNTGRPVWSCCWCSDNSNYVYAGLINGSVL
VYDLRDTSNCVQELVPLGSRCPVVSLSYVPRAASEVFPCGGVLVGTLEGACFWEMKDDQY
RPHVLPLEPGGCTDIQIESNTRHCLVTYRPGKNHNYVRGVMMELTSNRLNDSEDEYSCSC
YPVQTFNAGNTCKLLTKNAIFQSPERDGTILVCAGDEASNSAMLWHSGNGTLLQKLQADQ
PVLDICPMEVNQSSMLATLTEKMIKIYKWE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaagaaatggaggtggatcttcttaacctattgaatcccatgtattcaaac
agagatgtgagcacatcacatcagccccgtggtagtgggcaagttcttttcctgccaccc
ccccttacatattcagatgattccgaggacctcttcttaggaccaacggagccacatgat
gttattgtgttggattctgtggaggaggctcctgggcaggttgcagcaccaactaatgct
ctacagatgctccacagcgctcttgaacagttacgacaggctgctgagcaacgctcctct
gtacgtcctacaagggttcaaagaaggagtaccaggcggcatcaaagaggagggtcacag
cgtacagctggaactagttctcgtgctgcgttgagtaacttcttccaaataaacagaacc
caaggcgtggctcctacctccgaaagagaggagagaaatgctgctttgaggacagaatct
tcaagaacttcaccaggggacagttctgatgaaactgtggaactgagtgaagaagaggag
ggtggaggaggaagctcaacagatgttgatgaagtagatattaatgcaggagctgcacca
cctgcagagccagctcctgaggaactccagattaatgttatagaggttcaagcagaggcc
cctgaatcattacctgttcctgaaagtgtcacgttacctcttcaaatacaaaaaaaacag
aaaacaccagtgaaacagttgtcaccagtaaaacatttgccacctgaagaagatgaaggg
gacacatgtgcaatctgctttgagccatggacaaatgctggacagcaccgtctttctgcc
ctgcgctgtggtcatttgtttggcttcacctgcatcgaacgttggctgaaggggggtgct
gccaagtgcccacagtgcaataaaaaagcaaaacgtgccgatattgttgtactttatgcg
cggacactgaaagctctggacacaagtgagcaggaacgaatgaaaagttccctggagatg
gagcagagtatgcgcaggaaagcagagttggaatctgcacagtgccgactgcaggttcag
gtgctaacagatgagtgtggaaaattgcgcaagcagattcaggagttaaagatgctgatt
gctcagcatggcaccagtacctccatgcaggcttcttcctctcgatccactatttctggt
agcctgtcctctagccagggccagcacaagtacagctttgagaaagccatcctaatctct
cagactgggagctgtcgtgttatgtcatactgtgaaagtatgagctgcctagtagtatcg
caaccttcacctcagactacacttattcccggttgtggaattaaaaagctcagtgctgca
aatctgaaaagtagccagtatgttcccatacattcaaaacaaatcaggggccttgcattc
agcaatcgttctgatggcctgttgctctcagcagctcttgataacaccattaaactcacc
agcttgatgactaatactgtggtacaaacatataacacgggacgacccgtctggagctgc
tgctggtgctctgacaatagcaattatgtttatgctggattgatcaatggctcggtgctt
gtatatgatctacgagacacaagtaattgtgtacaagagctggtgccgctagggtccagg
tgtcctgtggtatcattgtcttatgtgccacgggctgcttctgaagtctttccttgtgga
ggtgtgctggttgggaccttagagggtgcatgcttctgggaaatgaaagatgatcagtat
cggccacatgtccttcctttggagcctgggggttgtacagacatacagatagagagcaat
acacggcactgtcttgttacttaccgtcctggtaaaaaccataattatgtacgtggcgtg
atgatggagctgaccagtaaccggctgaatgactcagaagatgagtacagttgttcctgt
taccctgttcaaacttttaatgcaggtaacacttgcaagcttctcaccaagaatgccata
tttcagagccctgagagagatggcactattctggtttgtgctggtgatgaagcttcaaac
tctgcaatgctttggcattcaggaaatggtactcttcttcagaagcttcaagcggaccag
cctgttttagacatctgtcccatggaagtaaaccagagcagtatgctggccactttaaca
gagaagatgataaaaatctacaaatgggaataa
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integrated database retrieval system
