Xenopus laevis (African clawed frog): 108715479
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Entry
108715479 CDS
T01010
Symbol
siah1.S
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04115
p53 signaling pathway
xla04120
Ubiquitin mediated proteolysis
xla04137
Mitophagy - animal
xla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108715479 (siah1.S)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108715479 (siah1.S)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108715479 (siah1.S)
09143 Cell growth and death
04115 p53 signaling pathway
108715479 (siah1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108715479 (siah1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108715479 (siah1.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108715479 (siah1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
108715479
NCBI-ProteinID:
XP_018116145
Xenbase:
XB-GENE-17341645
UniProt:
A0A974D5L4
A0A1L8GLB4
LinkDB
All DBs
Position
4S:complement(56906192..56939070)
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AA seq
313 aa
AA seq
DB search
MTAKASHSVLYQWKGVLLTCLSGSDPKRRKEMSRQTATAIPTGTSKCPPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEVTLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaaggcgagccacagcgtgttgtaccagtggaaaggggtgctgctcacgtgc
ttgtcaggtagtgacccgaagagaaggaaagaaatgagccgacagactgctacagcaatc
cctactggtacctcaaagtgtcctccctctcagagagttccagccctgactggcacaact
gcttcaaacaatgacttggccagcctctttgaatgcccagtgtgttttgactatgtttta
ccacctatacttcaatgtcagagtggccacctggtctgcagtaattgtcggccaaagctc
acttgctgcccaacctgcagaggccctttgggatcaattcgcaacttggctatggaaaaa
gtcgccaactctgtgctgtttccatgtaaatatgcctcgtctggttgtgaggtaactttg
ccgcatactgaaaaagctgaccatgaagagctttgtgagtttaggccttactcctgtccc
tgccccggggcttcgtgtaaatggcaaggttccttggatgcggtgatgccacacttaatg
catcagcataaatctattacaacgttacaaggagaggatattgtatttcttgccacagac
ataaaccttcctggtgcagtagactgggtcatgatgcagtcttgttttggctttcatttc
atgttagtcttggaaaaacaggagaaatatgacggccatcagcagttctttgcaattgta
cagctcataggaacacgcaagcaggccgagaactttgcttaccgactggagcttaacggc
caccggcggagattgacttgggaagcaacacctcgctctattcatgagggaatcgcaact
gccatcatgaatagtgactgcttagtatttgacaccagcattgcacaactatttgctgaa
aatggcaatttaggaataaacgttacaatctccatgtgctga
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