Xenopus laevis (African clawed frog): 108715618 Help Entry 108715618         CDS       T01010                                  Symbol rc3h1.S Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism xla  Xenopus laevis (African clawed frog) Brite KEGG Orthology (KO) [BR:xla00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:xla03000]     108715618 (rc3h1.S)    04121 Ubiquitin system [BR:xla04121]     108715618 (rc3h1.S) Transcription factors [BR:xla03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     108715618 (rc3h1.S) Ubiquitin system [BR:xla04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     108715618 (rc3h1.S) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 PaaA_PaaC Baculo_IE-1 Vesi_VP2 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  108715618 NCBI-ProteinID:  XP_018116421 Xenbase:  XB-GENE-17337460 UniProt:  A0A8J0V7M3 LinkDB All DBs Position 4S:77732905..77783813 Genome browser AA seq 1123 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQQITLCGGCGAEDTKHYEEARKCVEELALYLKPLSTARG VGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQ LSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQAS KTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRI APDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLE LLANIDPSPDAPPPTWEQLEDGLVAVKTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYM CRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPIGVPDE GPMDLPPRKPSGLPNGIMPGSSVTQLISRSTDSSFESVLKPVKLDHLSSSAPGSPPELHD SVSKTSMSALPINSHPAASRLSSDLPVSKQIQMVPRGSQIYAPPPADTFYQECRVGGPPF DAAPYAQGVYYPPQSSQCVSRFVRPPPAATEPANAYLDHYTPYLQDRVVSTQYGTPTQQY QAMVPTQYQPHYDNRRAYPSNAPPYQREDMVRASPVPLEMPPSAASPYVPESRERYQGIE GYYTHPGQVRPSYHREPYIRLPPQHTAQSHPSLDELHRRRKEIMAQLEERKVISPPPFAP SPTLPHSFHPDEYLDEELKVPGKFKGNDYSQYSPWSCDTFGSYIGTKDNKSKDLSAGGSV DVANVDGKSLRDQRIELHRRAAEPGEDDLIPFGDRPTVSRFGAISRTSKALYQPPVPMQQ AMAAQGAAKSNITDYSLYSSHSGLSGPSYPTHQNLPSQGHLSERERISKPLPTSEREQLR MELQQVNQQISQQTQMRGMEVATNRMLLREASSHGNQQQPPPPQPPAKWPSMMSSEQLSL ELHQVEREIGKRTRELGLESHSLSMKNKPETIKVENGQLEAPTVLTHDLPLTFSSEVPNG SGLTQDITLLSGKTASLTLSEDPQVGGDKSEPLRSGVNSTAAP NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagcgccgcaatggaccgactttctgtcctgccctatttgcacccaaact tttgacgaaacaatccggaagcccatcagtctaggctgtggacacacagtttgcaagatg tgcctgaacaagcttcaccgcaaggcttgtccattcgatcagaccaccatcaacacagat attgagcttcttcctgtcaactctgctctcctgcagctggtgggagctcaggtgcctgag caacaacagatcaccctctgtggaggatgtggagcagaggacaccaaacattatgaggaa gctaggaagtgtgtagaagagttagctctgtatttaaagccccttagcactgcaagaggt gtaggtctcaacagcacaactcaaagtgtgctgagtcgcccaatgcaaaggaaactggta acacttgtgcactgccagttagttgaagaggagggacgtattagagctatgagagcagct cgttcactgggagagagaacagtcactgagcttatcttgcaacaccaaaatcctcaacaa ctgtcttctaacctttgggcagctgtccgtgcccgtggctgccagtttctaggaccagct atgcaggaagaggcactaaagcttgtcctcctggctctggaagatggatctgcactctca cggaaagtccttgttttatttgtggtgcagagacttgaaccgcggttcccccaagcctcg aaaactagcattgggcatgttgtccagttgctttacagagcttcttgctttaaggtaaca aaacgtgatgaagactcctcccttatgcagctgaaggaggaatttcgcacctacgaagca ctgcgtcgagaacatgattctcagattgttcagattgctatggaagccggattgcgcatt gctcctgatcagtggtcctccctcctctacggggatcagtcacataaatcacacatgcag tccatcattgacaagttgcagaccccagcctcgtttgctcagagtgtccaggaactgacc attgctctacaaaggactggagaccctgcaaatcttaatagacttcggcctcatttggag ttgttggcaaacatagacccaagtccagatgcccctcctccaacttgggagcagttagag gatggtctggtggcagtgaagactgtagtgcatggattagtggattatattcaaaatcat agtaagaagggaacagaccaacagcagcctccacagcacagcaagtacaagacatacatg tgtagagacatgaaacagagaggaggctgtccccgtggggcaagctgcacctttgcccat tctcaagaagagttagaaaagtttcgaaaaatgaacaaacgtttagttccaagacggcca ctcagtgcttcacttggtcagttaaatgaggttggactacctataggagtacctgatgaa ggtcctatggacttaccaccccgaaagcctagtgggcttcccaacggcatcatgccagga agctcagtgacacagctcatctcaaggagtacagattctagctttgagtcagtactgaaa ccagtaaaattggatcacttaagcagcagtgcacctggatctcccccagaactgcatgat tcggtctccaagacatctatgtctgctttgcctatcaactctcatcccgctgcttcgcgt ctctccagcgatttgccggtttccaagcagatccaaatggtgccacgaggttcacagata tatgcccctcctccagctgatacattttaccaagaatgtcgggtaggtggacccccattt gatgcagctccctatgcacaaggtgtctattacccccctcaatcttcccaatgtgtttca cgctttgtcagaccacctcctgctgccactgaaccagccaacgcctacctcgaccactat accccatacttgcaggacagagttgtcagcacacagtatggcacccccactcagcagtac caggcaatggtacccacccagtaccagccacattatgacaaccgtcgtgcttatccctca aatgcaccaccttaccaaagggaggacatggttcgcgccagtccggtgcctctggaaatg cctccatctgctgcctcaccttatgttcctgaatccagagagagataccagggaattgaa ggttattatacacatccaggacaggtcaggccttcatatcatagggagccatatattcgt ttgcctcctcagcacacagcacagtctcaccccagcctggatgaacttcatagacgccgc aaggagatcatggctcagctagaagaaagaaaagttatttcccctccaccctttgcgccc tcacccactttgcctcacagcttccacccagatgagtaccttgatgaagaattaaaagta cctggaaaatttaaagggaatgattacagtcagtattcaccctggtcctgtgatacattc ggctcctacattggaaccaaagacaacaaatccaaagatctttcagctggtgggagtgtg gacgtagctaatgttgacggcaaatccctacgagaccaacgcattgagcttcatcgaaga gctgcagagcctggtgaggatgatctaatcccatttggagaccgacccaccgtttctcgc tttggggctatctcccgcacatcaaaagctctttaccagccaccagtcccaatgcagcag gccatggcagcccaaggagctgccaaatctaatattacagattacagcttgtacagcagt cacagtggcttgagtggtccatcatatccaacccatcaaaaccttccttctcagggacat ttgagtgagcgggaaaggatatccaagcctttgccaacatctgaacgagaacaactcagg atggaattgcagcaagtgaaccagcagatcagtcagcaaacacaaatgcgtggcatggag gtagctactaaccgcatgctattgagagaggcatcttctcatggaaaccagcagcagcca cccccaccacaaccgccagccaagtggcccagcatgatgtccagtgaacagctcagcctt gaacttcatcaagtggaacgggagattgggaagagaacacgtgaactcggcttggagagc cattcattgagtatgaaaaacaaaccagaaacaatcaaagtagaaaacggccaactggag gcaccaactgttctgacacacgacctcccactaacattcagcagtgaggtgccaaatgga tccggcctgacacaggacatcactttgttgtctggcaagacagcatctttaactctttca gaagatccccaagtcggaggggacaagagtgagccgctgagatctggagttaattccact gctgctccttaa

DBGET integrated database retrieval system