Xenopus laevis (African clawed frog): 108715639
Help
Entry
108715639 CDS
T01010
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108715639
04020 Calcium signaling pathway
108715639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108715639
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108715639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108715639
NCBI-ProteinID:
XP_041417446
UniProt:
A0A8J1KJF7
LinkDB
All DBs
Position
4S:complement(79993498..80272045)
Genome browser
AA seq
2386 aa
AA seq
DB search
MVLKMLGLSSCSTSAHTLTEPDQSSTLAIPALDADTQRYVLALPEAETWRKHRLGLTQAT
HSCNLLEPETLSETLVSRTASYDALYELRAREVESNFPFEGSSMFEVNAGLDSDFPLSPQ
VIKRRRGGLIEQKDIIKAHEAHKIQSTPQARRKEWEMARFGEAVTGRLSSADGGSERSKT
QQGSPAAPIGTQAAFKQSKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIIRKYAKK
LIDWPPFEYMILTTIIANCIVLALEQHLPGDDKTPMSRRLEKTEPYFIGIFCFEAGIKIV
ALGLVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGI
PSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKACYRNNSGMGLEPMD
PPHPCGVPRCPAGYECREWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYTTNDALG
ATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRHQQIERELNGY
RAWIDKAEEVMLAEENKNSGNSALAVLRRATIKRSRTEAMNRDSKEDHCVDISSVGTPLA
RASIKSAKMDGASYFRHKERLLRISVRHMIKSQVFYWMVLGVVALNTFCVAIVHHNQTLW
LTNILYYAEYLFLGLFLVEMAFKMYGMGPRLYFHSSFNCFDCGVTVGSIFEVLWAFFRPG
TSFGISVLRALRLLRVFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFALLGMQ
LYGGRFNFNDGTPSANFDTFPAAVMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYF
IILTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEVSPMSAPNA
SCTDKEHRRRHTMSIWEQRTSQLRRHIKMSSPEAIQSEELTALNPHSSIYRKNKEADEQK
TEKGEGNQDVKLVISPVEGPPEGEGSPSHRNLREHWRQKSRHGNTEPNGTTPEEAIRRRQ
SQRRSRHKRVRTEGREQCSNSNSTSASREGGLDKVTAEDGRTIPEGKSNGEPKEVKGMDD
EPLKICISSRNCEDRNNKILGYEGIALSNTPLQDVNSQEKDISPPDLDYSEQALLGSIQS
QESPNPTSCSLPDVSSSTERVTESTVITLPDTGVPADCTVVQTNEGRDGEVNFGSSQQDK
IEEDTEDGEERTIKRKEKLLESPKAIVPYSSMLIFSSTNPIRKVCHYIVNLRYFEMSILL
VIAASSIALAAEDPVLTNSDRNKVLRYFDYVFTGVFTFEMIMKMIDQGLILHDGSYFRDL
WNILDFVVVVGALIAFALANILGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVTSLKNVFNILIVYKIFMFIFAVIAVQLFKGKFFYCTDSSKETEKECIGSYIDHEKNKM
EVKRREWKRHDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDITEEDRGPSRSNRMEMSI
FYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMP
QNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMLF
SLECILKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSSFNMSFLKLFRAA
RLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIHLEEDSHIN
RHNNFRNFFSSLMLLFRSATGEAWQEIMLSCLGDKRCEPDTSATSGHNENERCGTDLAYV
YFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWAEYDRAACGRIHY
TEMYDMLTLMSPPLGLGKRCPNKVAYKRLVLMNMPVSEDMSVHFTSTLMALIRTALDIKI
AKGGADRQQLDSELQKDILAIWPNLSQKMLDLLVPMPKASDLTVGKIYAAMMIMDYYKQS
KAKKLRQQLEDQKNAPMFQRMEASALPEEILSNAKALPYLQQDTVSGLGGFPSLSPLSPE
EVFQPPCLDRDDEDFEEQLSLEPEVREFRREQLPNQDSYIPVEMLERPASVRASSMPRLA
ENPQVLSDVGSMRRSFSTTAEKRARSSWLDEFTMDRSSTDYAYRYQRRSYHASLRLSAHT
DAGHWSDNHRSGGRERGRSKERKHLLSPDPSRCNSEERSPQAACEHQDHQLSPGHTHRSV
QILDSLSESCTPSDTSTPRRGRRQLPSVPPTPRPLISFSSLIRRQKHSPPPQNKNDIILP
SEPGLSESSCSLTGHQSSQSTPQHYISEPYLALHEEMQSSDCPTEDTLTFEVAVATSLGR
SNTIAAAPLRHGWQMPNGHYRRQRKGGIPPVIPSRELSDTEEDDQC
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atggtattaaagatgctgggattaagctcctgttcaaccagtgctcatacactcaccgag
cctgaccagtcaagcacactagcgataccagcattggatgctgacacccagagatatgtc
ttggctcttccagaagcagaaacatggcgcaagcaccgattgggcctgacacaggctacc
cactcttgcaatcttctagaacccgagacactttctgaaacccttgtttcacgcactgca
agttatgatgccttgtatgaactgcgagcaagggaagtggagtctaacttcccatttgaa
ggcagcagcatgtttgaggtgaacgctgggctggattctgactttccattaagcccccaa
gtaataaagcgaaggagaggaggcctgatagaacaaaaggatatcatcaaggctcacgag
gctcataagatacagagtacaccccaggctcgacgcaaggaatgggagatggctcgattc
ggagaggctgtgactggcaggttgagctcggccgatgggggctcagagaggagcaagacc
caacaaggttcccctgctgcacctattgggactcaagcggctttcaagcaatccaaagcc
cagagggcaaggaccatggctttatacaaccccatccctgtcagacagaactgcttcacc
gtaaacaggtctctcttcatttttggagaagataatattatcaggaaatacgccaagaag
ctcattgattggcctccttttgagtacatgatccttaccacaattattgcaaactgcatt
gtcctggctttggaacagcatcttccaggtgatgacaagactccaatgtctcgcagattg
gaaaagactgagccctactttattgggatattttgctttgaagctgggattaaaattgtc
gctctgggactggtttttcacaaaggttcttatctccggaatggttggaacgtcatggac
tttatagtagtgctcagtggcatcctggccacagctggaactcacttcaatactcacgtg
gacctgcgtactttgcgggcagtgcgtgttctcaggccgctaaaactggtctcggggatt
cctagtttacagattgtgttgaagtcaatcatgaaggcaatggtccctctgctacagatt
ggattgttgcttttctttgccatcctcatgtttgctatcatcggccttgaattttacagt
ggaaagctgcacaaggcctgttacaggaacaactctggaatggggctggagcccatggac
ccacctcacccttgtggagtgccccgctgcccagctgggtatgagtgcagagaatggatt
ggacccaatgatggaataacgcagtttgacaacatcctatttgcggtgctgacagtcttc
cagtgtatcactatggagggctggaccacagtgctgtacactaccaatgatgccttagga
gccacatggaactggctgtatttcattcccctcattatcatcggatccttctttgtcctt
aatcttgtccttggagtgctgtccggtgaatttgccaaagagagagagagagtggaaaac
cgtcgggctttcatgaagttgcgcaggcatcagcagattgagagggagctgaatgggtat
cgagcatggatagataaagcagaggaggtcatgttggcagaagaaaataaaaattctggg
aactctgctttagcagttcttagacgagcaacaattaaaagaagtagaacagaagccatg
aaccgggactctaaagaagaccattgcgttgacatatcctctgttggcaccccccttgct
agagcaagcatcaagagtgccaaaatggatggggcatcatattttcggcacaaagaacga
ctattgcgaatctctgttcgtcacatgatcaaatcccaagttttctactggatggtcctg
ggagtggtagcacttaatactttctgtgtggctattgtccaccacaaccagaccctgtgg
ctcacaaatattctttactatgcagaatatttgtttcttgggttatttttggtggagatg
gcttttaaaatgtatggaatgggcccacgtctttactttcactcctccttcaactgcttt
gattgtggggtcacagtaggtagtatatttgaagtactttgggccttctttagaccaggg
acttcctttggaatcagtgtcctaagagctctccgacttttgagagtttttaaaataaca
aaatactgggcctcactaaggaacctggtagtgtccttgatgaattctatgaagtccatc
atcagcctgctcttccttcttttccttttcatagttgtttttgccctcctgggaatgcag
ctatatggtggcagattcaattttaacgatggcactccttctgcaaactttgatacgttc
cctgcagccgtcatgactgtattccagattctgacaggagaggattggaatgaagtgatg
tacaatggcattcgctcccagggtggtgttcgatccggaatgtggtcttccatatacttc
attatccttaccctctttggcaattacacactgctaaatgtatttcttgccattgccgtg
gacaacctggctaatgcacaggagttaactaaggatgagcaagaagaagaggaagctttt
aatcagaagcatgcattgcaaaaagccaaggaggtcagccccatgtctgcacctaacgca
tcatgtactgataaggagcacagaagacggcacacaatgtctatatgggaacagcgcaca
agtcagctaaggaggcacataaaaatgtctagtccagaagctattcaaagtgaagaactg
actgctctgaatccacactccagtatctatcgcaagaacaaggaagcagatgaacaaaag
acagaaaaaggagaagggaatcaagatgtaaaactggttataagtccagtggaaggacca
ccagaaggagaagggagcccttctcatagaaatctcagggaacattggcggcagaaatcc
aggcatggaaatactgagccaaatggaacaacaccggaggaagctatacgccgcaggcaa
agtcagagacgcagccgtcataaaagagttagaactgaaggtcgtgagcagtgtagcaac
tcaaacagcacctcagcaagcagagaaggtggtcttgacaaagtgactgcagaagatgga
agaacaattccagaagggaagagcaatggagaacccaaagaagtcaaagggatggatgac
gagcctcttaagatatgcatatcctcaagaaattgtgaagaccgaaataacaagattttg
ggttatgagggtattgccttgagcaatactcccctgcaggatgtgaacagccaagagaag
gacattagccctcctgatttggattacagtgagcaggctctgctgggcagcattcaaagc
caggaaagccctaatccaaccagctgcagtttgccagatgtgtccagcagcactgagcga
gtcacagagagcacagtcattacgttaccagatactggagtgcctgccgactgcaccgtg
gtacagacgaatgaaggaagggatggcgaagtcaactttggatcttcacagcaagacaaa
atagaggaggatactgaggatggagaagaaagaactataaaaagaaaagagaaattgttg
gagtcccccaaagccattgtaccatacagttcaatgctcatctttagctccaccaatccc
ataagaaaagtatgccattacatcgttaacctgcggtactttgagatgagcatcctgttg
gtaatagcagcgagtagcatagccttagcagcagaggaccctgtcctgaccaactcagac
cgcaacaaagttcttcgctattttgattatgtttttacaggagtcttcacttttgagatg
attatgaagatgattgaccaaggtttgattttacatgacggctcctattttcgtgacctc
tggaacatcttggattttgttgtggttgtgggagccttaattgcatttgccttagcgaat
attttggggactaacaaaggccgggacatcaaaaccattaagtctctacgtgtgttacgg
gtgctgcgtccactaaaaaccatcaaacgcctgccaaaactgaaggcagtctttgattgt
gttgttacctctttaaagaacgtctttaatattctcatcgtatacaaaatctttatgttc
atatttgctgttatcgctgtgcagctgtttaagggcaagttcttctactgtacagacagc
tcaaaggagacagagaaagagtgcataggcagttacatagatcatgaaaagaacaagatg
gaggtgaagcgcagggaatggaaaagacatgatttccattatgacaatattatatgggct
cttcttactctctttacggtatccacaggagaaggttggcctcaggttctgcagcactcc
gttgatataacagaagaagataggggtccaagccgaagcaaccgcatggagatgtccatt
ttctatgttgtctactttgtggtcttccccttcttctttgtaaatatatttgtggctctg
attatcatcacattccaggagcaaggagacaagatgatggaggagtgttccctagagaag
aatgagagagcctgcatagactttgcaatcagtgcaaagccactcacacgatacatgcca
cagaacagacacacattccagtaccgggtctggcattttgtggtctctccatcatttgaa
tataccatcatggctatgattgcactaaacacagtggtacttatgatgaagtattattct
gcgccatacacatatgaacttgcattaaagtatctgaatattgcattcacaatgctcttt
tctctggagtgcattctcaaaatcattgcatttggatttttgaattactttcgggatact
tggaacatttttgacttcattactgtaattggtagcatcacggaaatcattttaacagac
agtaagttggtgaacacgagcagctttaatatgagctttctgaagctgttccgagcagca
cgacttattaaacttctgcggcaagggtacaccatccggatcctgttgtggacttttgtt
cagtcatttaaggcacttccttatgtgtgtctcctcattgcaatgttgttcttcatctat
gccattattgggatgcaggtgtttggcaatatccacctggaagaggacagccatattaat
aggcacaacaatttcagaaatttctttagttctcttatgttactcttcaggagtgccaca
ggagaggcttggcaggagatcatgctttcatgtcttggtgataagagatgtgagccagac
accagtgcaacctctggacacaatgaaaatgagcgctgtggaactgaccttgcatatgtt
tattttgtttcattcattttcttctgctccttccttatgctaaatctgtttgtggctgtc
attatggacaactttgagtacttgacacgagactcctccattttgggacctcatcactta
gatgagtttgtacggatctgggctgaatatgatcgagcagcatgtggccgtatccattac
acagagatgtatgacatgctgactctcatgtcaccacctctaggccttggaaagagatgc
cctaacaaagtggcttataagagactggtcctgatgaatatgcctgtgtcggaggacatg
tcagtacatttcacgtcgactcttatggccctaatacgcacagcattggatatcaaaata
gccaaaggaggtgctgacaggcaacagctggactctgaactgcaaaaagatatacttgcc
atttggccaaatctctcccagaaaatgctggacttacttgtgccgatgccaaaagcctct
gatttgacagtggggaagatttacgctgcaatgatgatcatggattattataaacagagc
aaagccaaaaaactgagacagcagctggaggaccagaaaaatgcaccaatgttccagaga
atggaggcttccgccctccctgaagaaatcttatccaatgccaaagccttaccctacctt
cagcaagacactgtgtcgggccttggtggattcccttcactgagtcccctgtccccagaa
gaagtattccagccaccatgtttagacagggatgatgaagactttgaagagcagctgtct
ctggagcctgaggttagagagtttagaagggagcagctccctaaccaagacagctacatc
ccagtggagatgctggaacgcccagcgtctgtgagagcttcctccatgccacgtctggct
gagaatcctcaggtcctgtcagacgtcggctccatgcgtcgctccttctccacaactgca
gagaaacgagcacgcagctcctggctagatgagttcactatggacaggagcagcacagac
tatgcatacagataccagaggcgcagttatcatgcatctctaagattgtctgcacataca
gatgcaggtcattggtcagataatcatcgttctggcgggagagagcgtggaagatccaaa
gagagaaaacacttgctgtcccctgatccttcacgttgtaattctgaggaaaggagccca
caagctgcctgtgaacaccaagatcaccaactgtcccctgggcacactcacagaagtgta
cagattcttgactctctgagtgaaagttgcaccccttcagacaccagcaccccaagacga
ggccgtagacagcttccctcggtgcctccaactcctagaccccttatctccttctcctca
ctaattcgccggcagaagcacagcccccctccccaaaataaaaatgatattattcttcct
agtgagcctggtctgagtgagtcttcctgctcccttacgggtcatcagagctcccagtct
acaccacagcattatatttcagagccctacttggcactgcatgaggagatgcaaagctca
gactgccccacagaggacacactcacctttgaagttgctgtggctactagtctgggccgc
tctaacaccattgccgctgctccactgcgtcatggctggcaaatgcccaatggtcactac
cggcgtcaaaggaagggaggcattccaccagtgataccctccagagagttaagtgacaca
gaagaggatgatcaatgttaa
DBGET
integrated database retrieval system
