Xenopus laevis (African clawed frog): 108715742
Help
Entry
108715742 CDS
T01010
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715742
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108715742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
108715742
NCBI-ProteinID:
XP_018116657
UniProt:
A0A8J0V7J6
LinkDB
All DBs
Position
4S:complement(97229305..97314292)
Genome browser
AA seq
245 aa
AA seq
DB search
MSSSYNHHVVDRQGSRLESPITASLDNLQAKKNFSVSHLLDLEEAGEMVGAQAEDGSGEA
GRSLLESPGLTSGSDTPQQENEQMTAEQKKKRKQRRNRTTFNSSQLQALERVFERTHYPD
AFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYAGDVTAVEQPIV
PRPAPRPNEYLSWGTASPYSAMATYSSTCANTNPAQGMNMANSIANLRLKAKEYSLQRNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagctataaccaccacgttgtggacaggcaaggcagccgcttggagagtccc
atcacggccagtctggacaatttacaggccaaaaagaacttctcggtgagtcacctgttg
gatctggaggaagctggggaaatggtgggggcacaagccgaagatggatcaggggaagcc
ggcaggagtttactggagtccccgggtttgaccagtggaagtgacactcctcagcaagaa
aatgaacagatgactgcagaacagaagaaaaagagaaagcaaaggaggaacagaactaca
tttaacagcagtcaactgcaagctctggaaagagtgtttgagaggacgcattatccagat
gcctttgtacgggaagacctagcgcgcagagttaacctcactgaagccagagtccaggtt
tggttccagaacagaagagccaagttccgcagaaatgaaagagctatgctggcaaacaag
aatgcttcccttctcaaatcctatgcaggagatgtgaccgctgtggaacagcccattgta
ccccgcccagccccgaggcccaatgagtatctatcttggggcacagcatccccatatagt
gccatggctacctattcctctacctgtgccaacaccaatcctgcccaggggatgaacatg
gccaacagcatcgccaaccttaggctgaaggcaaaggaatacagtttacagaggaaccaa
gtgccaacagtcaattga
DBGET
integrated database retrieval system
