Xenopus laevis (African clawed frog): 108715779
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Entry
108715779 CDS
T01010
Symbol
srebf2.S
Name
(RefSeq) sterol regulatory element-binding protein 2-like isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715779 (srebf2.S)
04131 Membrane trafficking [BR:
xla04131
]
108715779 (srebf2.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108715779 (srebf2.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108715779 (srebf2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
CKAP2_C
Motif
Other DBs
NCBI-GeneID:
108715779
NCBI-ProteinID:
XP_018116725
Xenbase:
XB-GENE-17337000
UniProt:
A0A1L8GH19
A0A974D174
LinkDB
All DBs
Position
4S:complement(100821036..100857579)
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AA seq
1096 aa
AA seq
DB search
MDTSELNMENMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFEEQLCQSYQGNNAVDT
ALPKAYNQAIQQPYTTPTPQPQMLPVKAAPQATPQRSAPLLQPRPVVQTSPHPKLQQQTL
MLTPNFSTAPQTRIIQQPLIYQNAGTASFQVLQPSVQGLMTTQQMQPVTIQQQVQTVQAQ
RVLTQAANGTIQTLTPATVQTVTPQVQQVPVLVQPQIIKTESLVLTAVKADGSPVMTTVQ
NPAITTLTAPLQTTSLQTLMGSNGAFLTTMPVMMGQERMAIEQVPGSLKQPEVPKEGERR
TTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGILKKAIDYIKYLQQVNQKLRQENM
ALKLANQKNKYLKGIDLSSLVDTSIGMRMDEFNQNILMMSPPASDSGSPAVFSPYSVDSE
PGSPLLDDEKVKDEPDSPTGLGMMDRSRMLLCTMTFLCLSFNPLTSLLHSESGQYSERAV
QHGTGRNMLGIEMSGFYGSWFDWLIPTLILWLVNGVIVLSVFMKLLIHGEPVTRLHSRSS
VKFWRHRKQADLDLAKGDFSAAALNFQTCLCVLGRSLPASRFDLACSLSWNIIRCSLQKI
SLVRWLLKHSPGYCKKAEFQDEATTSARDAALVYHKLHQLHLTGKLPSNWNCSGLNLALC
AVNLAECAGNKISPTLLSEIHLTTAIQMKTSFPTRFRFLTAYFLGCAQNASSEETIPDPM
QWLAHPLGKYFFIYSNWALKSAAKDSLYTSSRNPADPVTQIHRAFCESLLEKAMYTMAKP
ETSKAASEEESCEFSRAQEYLKLLSGLADSVGNIASLPLSGSSPMSSADPICRWWYSVSS
MAIGWLQGDDSVVKSHFAEVERIPKLLDSDNPLVKAVIHVCRAMQAAVLGKCDGQQSSFY
HCEKASTFLWNSLNMSSTGNTNLNKVVQLLICDLLLSLRTSLWQKQSSSPAAGESIHAPT
SVLTGFQRDLSSLRRLSFIFKPAHCKLFLHEATVRLMAGASPTRTHQLLQHSLQKRTALA
NKQGDLDSLPGQRERATAILLACRHLPLSFLSSPGQRAVMLAEAARTLEKVGDRRSYHDC
QQMMVKLSGGTAMAAS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcggaactaaacatggagaacatggagacgttgacagaacttggagatgaa
ctcaccctgggggatattgacgaaatgctgcagtttgtcagtaatcaggtgggtgagttt
ccggacctatttgaggaacagctgtgccagagttatcaaggaaataatgcagtggacaca
gccttacccaaagcttataaccaggctatacagcagccatatactactccaacacctcag
cctcagatgttgcctgtaaaagcagccccacaagccacaccccagagaagtgctcctctt
ctccagcccagaccagtggttcagacttctcctcatcctaagctgcaacaacagacactg
atgctcacccctaatttcagcaccgcaccacagacccgaataatacagcagccacttatc
tatcagaatgctggtactgcaagttttcaggtgcttcaaccctcagttcagggtctaatg
acaacacagcagatgcagccagtcacaattcagcagcaagtacagaccgttcaggcccaa
cgagtcctgactcaagcagctaatggtacaatccaaacactgactccagctactgttcag
acagttacccctcaggtccaacaagttcctgtgcttgtgcagccgcagataatcaaaaca
gagtctttggtgcttactgcagtgaaagcagatggcagccctgtgatgaccactgtgcag
aatccagcaataacaacacttactgctcctttacagacaacatctctccaaacccttatg
ggcagcaatggggcttttcttaccacaatgccagtaatgatgggacaagaaagaatggcc
atagaacaagtaccaggaagtcttaagcaaccagaggtacccaaggaaggcgagaggaga
acaacacacaacataatagagaaaaggtatcgttcatctatcaacgacaaaattatcgag
ctgaaggatttggtcatgggcacagatgctaagatgcacaaatcaggaatcctgaagaag
gccattgattatataaaatacttgcaacaagtcaaccagaaactgcgccaggaaaacatg
gctttaaaactagccaatcagaaaaacaaatacttaaaaggtattgatcttagcagtctg
gtggatacaagtattggaatgagaatggatgaattcaatcaaaacatcttgatgatgtct
cctccagcatctgattctggttccccggctgtgttctctccatattctgtggattctgaa
ccagggagccctttgttagatgatgaaaaggtaaaagatgaaccggactcccccacagga
ctgggtatgatggaccgttcacggatgcttctttgcaccatgacattcctgtgcttatcc
ttcaaccccctgacatctttgttacactctgaaagtggccagtactctgagagagcagtg
caacatggaacagggagaaacatgcttggtattgaaatgtcaggtttttatggcagctgg
tttgattggcttatacccaccttaatcctttggcttgttaatggagtgattgttctcagc
gtcttcatgaaattactcatccatggagagcctgtgacccgtctacattcccgctcatct
gtcaaattctggagacatcgcaagcaggcagatttggatcttgctaagggggattttagc
gcagcagccttgaactttcagacatgcttgtgtgttttgggacgctcattacctgcctcg
cggtttgatctagcatgcagcctttcctggaacatcattcggtgtagcctgcaaaagatc
agccttgtccgctggctgctaaaacactcccctgggtactgcaaaaaagcagagtttcaa
gatgaagcaacaaccagtgcaagggatgccgcccttgtataccacaaactgcaccaactg
catctcacagggaagctgccatctaattggaactgttcaggtctcaaccttgccctttgt
gccgtaaatctggccgaatgtgctggcaacaagatctcaccaactttactttcagaaatc
cacctcacaacagccattcaaatgaaaaccagtttcccaactagattccgctttctcact
gcatatttccttggatgtgcacaaaatgcttcttctgaggaaaccattcctgaccctatg
caatggcttgcacaccctttggggaaatactttttcatctattctaactgggcactgaag
agtgcagctaaagactctctttacacctcttcaagaaacccagccgatccagttacacag
attcatcgtgctttttgcgagtctttgttggaaaaagcaatgtacaccatggcaaaacca
gaaaccagtaaagcagcctctgaagaagagagttgtgagttttccagagctcaagaatat
ttgaaacttctaagtgggcttgcagattccgtggggaacattgcctctcttcccctcagt
ggatcttctcccatgtcctcggcagatcctatctgtcgctggtggtactctgtatcttcc
atggctattggctggttacaaggggatgattctgtggtgaaatcacactttgcagaagta
gaaagaattcctaagctccttgactctgataaccctctggtgaaagcagtgatccatgtg
tgccgagccatgcaagcagctgtacttggtaaatgtgatggccagcagagctcattctat
cactgtgagaaagccagcacattcttgtggaacagtctgaatatgagcagcaccggcaac
acaaatctcaacaaggtggtgcaacttttaatttgcgaccttctgctttcattgcgcact
tccttatggcagaaacagtcctccagtccagcagctggagaatctattcatgcacccact
tctgtcctaacaggattccagcgtgatctcagcagtctgcgtcgtttgtctttcatcttt
aaacctgcccactgcaagctcttcctccatgaagccacagtacgattgatggctggtgca
agtccaacccgtacacatcagcttctgcaacatagcttgcaaaaacgcacagcacttgca
aataaacaaggtgacctggactcattacctgggcaacgggagagagctacagctattctt
ctggcctgtcgacacctaccactttcattcctatcatcccctgggcagagagcagtcatg
cttgccgaagctgcccgaactcttgagaaagtgggcgaccgtcgctcttaccacgattgt
cagcaaatgatggtaaagctgagtggcggtactgctatggcagcctcctga
DBGET
integrated database retrieval system
