Xenopus laevis (African clawed frog): 108715787
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Entry
108715787 CDS
T01010
Symbol
sox10.S
Name
(RefSeq) transcription factor Sox-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108715787 (sox10.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108715787 (sox10.S)
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Gene cluster
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108715787
NCBI-ProteinID:
XP_018116740
Xenbase:
XB-GENE-17343488
UniProt:
A0A974D014
A0A1L8GH44
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Position
4S:complement(101370889..101379741)
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AA seq
438 aa
AA seq
DB search
MSDDQSLSEVEMSPVGSEDPSLTPDPHPPHAHSSPEDDEETKVKKEQDSEDERFPVCIRD
AVSQVLNGYDWTLVPMPVRVNGGSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL
SKTLGKLWRLLNENDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPNPGEGDGSSET
EGGAASIQAHYKNSHLDHRHGSPMSDGNSDHSTGHSHGPPTPPTTPKTELQAGKSDGKRD
GSRALGEGGKPHIDFGNVDIGEISHDVMSNMETFDVNEFDQYLPPNGHAGHPSHIGGYTS
SYSLTGALAAGPSAWALAKQHPQTVADSKAQVKTESSSTSHYTEQPSTSQLTYTSLGLPH
YGSAFPSISRPQFDYADHQPSSSYYSHSSQASSLYSAFSYMGPPQRPLYTTISDPPSVAQ
SHSPTHWEQPVYTTLSRP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaccaaagcttgtccgaagtagagatgagccctgttgggtctgaggatccc
tccttgacaccagacccacatccccctcatgctcactccagtccagaagatgatgaagaa
acaaaagtaaagaaagagcaagattcagaggatgagaggtttcctgtgtgcattcgtgac
gcagtctcccaggtgctgaatggctatgactggacattggttccgatgcctgtaagggtc
aatggtggcagcaaatctaaacctcacgttaagcggcccatgaatgcctttatggtatgg
gcccaggctgcacgccggaaactggctgaccaatacccacatttacacaatgcagaactt
agcaagactctgggtaaactctggaggctgttgaatgagaatgacaagaggccctttata
gaggaggctgagaggctgcgaatgcagcataagaaggaccacccagattacaagtaccag
cctcgtagacggaagaatggaaaacccaaccctggagagggagatgggtcctctgaaact
gagggtggcgctgcctccatacaagcacattacaaaaactcccatctagatcaccgacat
ggttctcccatgtccgatgggaattcagaccactctacaggtcatagtcatggaccccct
accccaccaacaacgccaaagactgagctacaggcaggaaagtctgatggcaagagggat
ggttctcgtgcattgggagaaggtggaaaacctcacattgattttggaaatgtggatata
ggtgagatcagtcatgatgtcatgtctaatatggagacatttgacgtcaatgaatttgac
cagtaccttccacctaatggtcatgctgggcacccaagtcacattgggggctacacctcc
agctatagtctcactggagctctagcagctggtccatctgcttgggctctggcgaagcaa
caccctcaaactgtggcagactccaaagctcaagtgaagacagaaagctcaagtacaagt
cattatacagagcaaccatctacatctcagctgacctacacttcacttggccttccacat
tatggttcagcattcccctccatctctaggccacagtttgattatgctgaccatcaacca
tcaagttcttattacagccattcctcccaagcctccagtctctattcagccttttcctac
atgggacctcctcagcgtccactttacactacaatatctgatcctccaagtgtagctcag
tcacacagccctacacattgggaacagccagtctatactacactttcaagaccatga
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