Xenopus laevis (African clawed frog): 108715847
Help
Entry
108715847 CDS
T01010
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108715847
Cilium and associated proteins [BR:
xla03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
108715847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_17
TPR_14
TPR_16
RPN7
Rapsyn_N
TPR_6
TPR_11
TPR_19
TPR_9
PUB
ANAPC5
Wzy_C_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
108715847
NCBI-ProteinID:
XP_018116837
UniProt:
A0A8J0V7Y4
LinkDB
All DBs
Position
1L:complement(162571639..162905878)
Genome browser
AA seq
2442 aa
AA seq
DB search
MEQQAGKKKERSSVIVAKAFGGKVVDSSVLSKEEFIEKVRHSNEACKNGDFQLAINLYTE
TLQVDPQNCILYSNRSAAFLKIQQFEKSLDDAIKARLLNPKWPKAYFRQGVALQYLGRHA
DALAAFASGLAQDPKSLQLLLGMVEAAMKSPMRESLEPTYQQLQKMKLDKSPFVVVSVIG
QELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDV
AKTLGDQTGECRAYGNMGSAFFSKGNFREALTNHRHQLVLAMKLKEREAASSALSSLGHV
YTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVHCHEQHLKI
AKELGNKREEARAYSNLGSAFHYRRNFDKAMSYHNHVLELAQELPDKAIEMRAFAGLGHA
ARCMQDLERAKQYHEQQLSIAESLKDRAAEGRASSNLGIIHQMKGEFDTALKLHKTHLSI
VQELNDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVA
YQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEYMQAVPFYEQYLRI
SPDLQDMEGEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAYCNLGLA
FKALMNYNKAEDCQKYLLSLAQSLNNSQAKFRALGNLGDIFVAKKDINGAIKFYEQQLSL
AHHVKDRRLEASAYAALGSAYRMIQKYDKALGYHTQELEVFQELNDLPGECKAHGHLAAV
YMSLEKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMNMNVMEEAIGYFEQQLAM
LQQLNGNDSMLDRGRAYGNLGDCYDALGDYEEAIKYYEQYLSVAQSLNRLQDQSKAYRGL
GNGHRSLGNLQQSLVCFEKRLVVAHELGETSNKAQAYGELGNLHSQLGNYEQAISCLERQ
LNIAREMKDQILESDAACGLGGVHQQMGEFDMALQYHQLDLQIAEETNNPSCQARAYGNL
GLTYESLGNFERAVVYQEQHLSIAAEMNDLAAKTIAYSSLGRTHHALQNYSQAVMYLQEG
LRLAEQLGRREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLS
LFDLQTSSYQALQRVLISLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTID
QILETINSQRGLVLYFSLAAGYLYSWLLVPGSGILKFHEHYLGEISMENTSEFNESGSMS
FQGSNNSVLEQYIANVRETLGVDSYYTRTCASSETESEAGDYMDQQYDDLNNKINSATDP
TGFLRMVSRNNTFNRSCQSMTSLFSNTMSPVKDNTSSLSRKQSSFSKPPLRALYDLLLAP
MEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFNLIAVPSIRSLSI
NSKSHFRKNVPMYSNSTSMAAVVGNPKLPPSVMDRWLWGPMPSAEEEAYMVAELLGCQPL
VGNLAMKEKVMSALSQAECVHFATHISWKLAAIILTPNSEGVSGTTKTFGNTYTIPESLQ
MPDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSYQESSNKVTADGVIGLTRA
FLAAGAQCVLVSLWPVPVSASKMFVHAFYSSLLNGMKASASLSEAMKTVQSSKQYSHPSN
WAGFMLIGSDVKLNSPSSLIGQALSEILQNPDRARDALRVLLHLVEKSLQRIQNGQRNSM
YTSQQSVENKVGGVQGWQSLLTAVGFRLDPPSSGLPAAVFFPTSDPGDRLQQCSTTIQSL
LGLPHSALQALCKLITASETGEQLINRAVKNMVGMLHQVLVQLQAGDKEHDFSSAPIQVS
ISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQANKRTMQFALQSLLALFDSTELP
KRLSLDSSSSLESLASSQSVSNPMPQGYPGHPFSPPCPDGMASDAISVYSLSSIASSMSF
VSKPECLLEGDQKMRHDHERPKNIYSLRTSASRSQSSPQSNISLGKEEQEEYDGFSIISN
EPLLSYTENTDSGIKQDCLQESIHVSVNPKGSISTPNSPVKLALIRSPNSPFQKVGKLTS
SDTGESDQSSTETDSTVKSQEENQKLNPEELAQKILEETQSHLIAVERLQRSGSQVIKRS
NSADGTSTPNGGSSFRSSETSAFSRPVQKGMPSPVTVKPKPPTRSSSLQKVSSGYNSPAN
SETSLKEGISIHSGQASPSSDSPHFRLKYPSSPYSSHISRSPLNISPSSGHQSPAGSTSS
PALSYSSAGSARSSPADAPDIDKLKLAAIDEKVKAIHNLKMFWTSTPQQTSGPIKILRGA
PGTMTSKKDVLSLLNLSPRHSKKEEAADNLELKELSVQQKNIDAVPQIPPNGHKQTENIN
VANVTQSTPSINLPGTLRSIKLSSGNGYKFLSPGRFFPSSKC
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcagggaaaaagaaagaaaggtcttcagttattgtagcaaaagctttt
ggtggaaaagtagtggacagctcagtgctgagcaaggaagaatttattgagaaagtccgt
cacagcaacgaagcctgtaaaaatggagactttcagctggccatcaatctttatactgaa
actttgcaggtggatcctcaaaattgtatactctacagtaacaggtctgccgcctttcta
aaaattcagcagtttgagaagtctctggatgatgctatcaaagctaggctgttgaaccca
aaatggccaaaggcatacttcagacagggtgtagccctccagtatctcggtcgccatgcg
gatgcactggctgcatttgcttccggcttagctcaggatcccaagagtttacagcttttg
cttggcatggtggaggcagcaatgaaatcgcccatgagagaatctctggaaccaacctat
cagcagctacaaaagatgaaactggacaagagcccctttgtcgttgtgtcagtgatcgga
caagaactactgactgcaggacatcatggtgcctcagtggttgttttagaagctgcgctg
aaaattggaacttgcagcttaaaactgaggggctcagtgttttctgcgctgagcagtgct
tactggtctcttggcaacacagagaaaagtacgggatatatgcaacaggacttggatgtg
gcaaagactctaggtgaccagacgggagaatgccgagcctatggaaatatgggatctgca
ttcttttccaaaggaaactttcgggaggcacttactaaccacaggcatcagcttgttctt
gccatgaaactgaaggaaagagaggcagcatcatctgccttgagcagcttgggtcatgtc
tacactgcaatcggagactaccccaatgcactggcgagccacaagcagtgtgtcctccta
gctaaacaatccaaagatgaactttctgaagccagagaactgggcaacatgggagcagtc
tatattgctatgggggactttgaaaatgcagtccattgtcatgaacaacatttaaaaatt
gctaaagaacttggaaacaaacgtgaggaagcccgggcttacagtaaccttggcagtgcc
tttcactacagaagaaactttgacaaagcaatgtcctaccacaaccatgtactggaactt
gcacaggaattgccggacaaggcgattgagatgcgagcctttgcaggtttagggcatgct
gcgagatgtatgcaggatttggagagggctaaacaataccatgaacagcagttatccatc
gcagaaagtctcaaggaccgggcagctgaaggaagagcttcttccaatttgggaataatt
caccagatgaaaggagaatttgatactgcactgaaactacataaaactcacctttccatc
gttcaagaactaaatgattatgcagcccagggcagggcatatggcaacatgggaaatgca
tacaatgcacttggaatgtacgaccaagcagttaaatatcatcggcaagagcttcagatc
tctatggaggtcaatgaccgagcttcgcaagcatctacacatgggaatttagctgtagca
taccaggcgttaggtgcacacgacagagcattacagcattaccaaaaccatctaaatatt
gctcgggaactgagagatatacagagtgaagctcgagcacttggcaaccttggaaatttt
cattgctctcgtggagaatatatgcaggctgtacctttctatgaacagtacctaaggata
tctcctgatttacaagatatggagggtgaggggaaggtatgccataatcttggctatgca
cattattgccttgggaactatcaggatgctgtgaaatactatgagcaggatcttgcacta
gcaaaggatctccacgacaaactaagccaagccaaggcatattgcaacttgggtctagct
tttaaagcattaatgaactataataaagcggaggattgccagaaataccttttgtctttg
gcacagtccttgaataattctcaagcaaaattccgtgcacttggaaaccttggtgatatt
tttgttgctaagaaagatataaatggtgcaataaaattttatgaacagcagttgagttta
gcccatcatgtcaaagacaggcgactggaggcaagcgcttatgctgctttaggcagcgct
tacagaatgatacaaaaatacgacaaagcactgggatatcacacacaagagctagaagtt
tttcaagagttaaatgatttaccaggtgaatgcaaagctcacggtcaccttgcagcagta
tatatgtctctagaaaaatataccatggcctttaagtgttacgaagaacagcttgaactt
gggcaaaagctgaaagatcctagcatagaggctcaggtctatggaaacatgggcatcacc
aaaatgaacatgaacgtaatggaggaagccattggctattttgaacaacagctagcaatg
ttgcaacagttgaatggaaatgattccatgttggacagaggtcgagcttatgggaattta
ggggattgttatgatgctctgggggattatgaagaagcaataaaatattatgaacagtac
ttatctgtagcccagagcttaaatcgtttacaagatcagtccaaggcttacagaggtcta
gggaatggacacaggtctttggggaatttgcagcagtctcttgtatgctttgaaaagaga
cttgtggttgctcatgaactgggggaaacgtcaaacaaagcccaggcatatggagagctg
ggaaacttgcacagtcagctaggaaattatgagcaagcaatatcctgtctagaacgtcaa
ttaaatattgccagagaaatgaaggaccagatacttgaaagtgatgcagcctgcggtctg
ggtggagtgcatcagcagatgggggaatttgatatggcattacagtaccatcaactggac
ctgcagatagcagaagaaacaaataatccctcatgtcaagctcgagcatatggaaatctt
ggactaacttatgaatccttgggtaactttgagcgagctgttgtttatcaagagcagcac
cttagtattgctgcagaaatgaacgacttagctgcaaagactatagcctacagtagtttg
ggaaggacccaccatgccttgcagaactactcacaggccgttatgtacttacaggaaggc
ttgaggttagcagaacagctgggccgtagagaagatgaagccaaaataagacatcgtctc
ggactttcgctttgggctagtggaaacctggaagaagctcaacaccaactttacagagct
tcagcgttatttgaaacaataagacatgaagcccagctcagcactgattataagctttcc
ctgttcgatctgcaaacatcatcatatcaggcactgcagcgggtgctaatcagtctcggg
catcatgatgaagctttagcagtagcagaaagaggaagaacaagggcatttgcagatctt
ctagtagaaaggcagaccggccagcaagattctgatccttactcgcctgtgaccattgat
cagatcttggaaacaatcaacagtcagaggggtctagtgctgtacttttcattagctgct
ggttatctgtacagctggctccttgttcctggttctggaatcttgaagttccatgaacat
tacttaggagagatctcgatggagaacaccagtgagttcaatgaatcaggcagcatgagt
tttcaaggctctaacaactctgttttagaacagtacattgctaatgtccgagaaacatta
ggagtggactcgtactacaccaggacttgtgctagcagtgagactgaaagtgaggctgga
gattatatggaccaacaatatgatgaccttaacaataaaatcaactctgctacagaccct
accggattcttaagaatggttagcagaaacaacacgtttaacagaagttgccaaagtatg
acaagtcttttcagtaataccatgtcacctgtgaaggacaacacatcttctctttctcga
aagcaaagctctttcagtaaaccacctctgcgggctctctatgacttgctcttggctcca
atggaagggggtctcatgcattccagtggcccagtgggcaggcatcgacagctcgtgttg
gtgttagaaggagagctctatctcattccttttgctttgctcaaagggagctcatcaaat
gagtacctttatgaacgcttcaatctcattgctgtaccttccattcgatctctcagtatc
aattccaagtctcacttccggaagaatgttccaatgtactcaaattctacctcaatggcg
gctgttgtgggcaaccccaaacttcctccatcagtaatggatagatggctttggggacca
atgccttcagcagaagaagaagcctatatggtggcagagctacttggatgccaaccgctt
gttggaaatttagcaatgaaagaaaaagtcatgagtgccctttctcaagcagaatgtgtc
cactttgccactcacatctcatggaagctagcggctattattttgacgccaaacagcgaa
ggtgtttcgggaacaaccaaaacatttggcaatacctatacaattcctgaatctctgcaa
atgccggatgatgccagcgatgtagaaagcatttcagactgtccccctctccaggaattt
ttgctgactgcagcagatgttttggatcttcggctccccgtaaaattagttgttcttggt
tcttatcaggaatccagcaacaaggttacagcagatggtgttattggcttgacgagagcc
tttttggctgcaggagctcagtgtgtcctcgtatccctctggcctgttcctgtgtccgct
tcaaaaatgtttgttcatgcgttttactcatctctcctaaatggaatgaaagcaagtgca
tcgctctctgaagcaatgaaaacagtgcaaagtagtaagcaatactcacatccatcaaac
tgggcaggattcatgctcattggaagtgatgtgaagctcaacagcccatcctcactgatt
ggacaagccttgtcagaaatccttcaaaacccagacagagcaagggatgccctcagagtc
ctactacatctggttgagaagtccttgcagcgaattcagaatggacagcggaattctatg
tatacatctcaacagagcgtggagaataaagttggcggagttcaaggctggcagtcattg
ttgacagctgtagggtttcgtctggaccctccatccagcgggcttcctgcagcagtgttc
ttcccaacttctgatcctggtgatcgtctgcagcagtgcagtaccaccatacagtcactt
ctaggtttgcctcattcggcccttcaggcactttgtaagctcataactgcttcagaaact
ggagaacagcttatcaatcgggctgttaaaaatatggttggaatgctacatcaagttctt
gttcaacttcaggctggagacaaagaacatgatttctcatcagcacccattcaggtgtcc
atcagtgttcagctgtggagacttccaggatgtcatgaatttttagcagctttgggcttt
gacctgtgtgaagttggccaagaggaagtcattctgaaaacaggcaaacaagctaacaag
aggacaatgcagtttgctttacagtctcttcttgcactctttgattctacagagcttccc
aagcgccttagtcttgacagttcttcatcacttgaatcgctggcttcttctcagtctgtt
tccaatccaatgcctcaaggatatccaggtcatccattctcaccaccttgcccagacggc
atggcttcagatgctatatctgtctacagtctgagctcaattgcctcttcaatgagtttt
gtttctaaacctgagtgtctactagagggagaccaaaaaatgcgtcatgatcatgaaagg
ccaaaaaatatttattctcttagaacctcagcgtcaagaagccagtcttcccctcaatcc
aacatttcacttggcaaggaagagcaggaagaatatgatggattttctatcataagcaac
gaaccactcctttcatatacagaaaacaccgattctggcatcaaacaggattgtcttcaa
gaaagcattcatgtgtctgttaatcctaaaggtagtataagtacacccaactcccctgtc
aagttggctttaattcgaagtccaaattctccttttcagaaagttggaaagcttacaagt
tctgatactggagaatctgatcagtctagcaccgaaactgacagtacagttaaatctcaa
gaagagaaccaaaagcttaatcctgaagagctggctcaaaaaatattagaggaaacccaa
agtcatttaatagccgttgaacgacttcaaagaagtggcagtcaggtgattaagaggagc
aattcggctgatggtacttcaactccaaatggtggctctagtttcagatcttctgaaaca
agtgcttttagcagacctgttcagaaaggaatgccatcccctgttactgtaaaaccaaag
cctccaacaaggagttcttctcttcagaaagtaagctcaggctataatagcccagcaaac
tcagaaacatcattaaaggaagggataagcattcatagtggtcaagcttcaccaagctca
gattctccacacttcagactaaaatatcctagttctccatacagctcacatatttccagg
tcccctctgaacatatcaccaagctcagggcatcagtctccagcaggaagtacctcatcc
ccagcattgtcctactcctctgctggatctgctcgatccagtcctgcagatgctccagat
atcgacaaattaaaacttgctgccattgatgaaaaggtgaaagctattcacaatttgaag
atgttttggacaagtactccacaacagacatcaggtccgataaaaatattacgtggagct
ccaggaacaatgacttcaaagaaagatgttcttagtttgttgaacctctctcctagacat
agtaagaaagaagaagctgcagataaccttgaactgaaagaattatctgttcagcagaaa
aacattgatgctgtcccacagattcctccgaatggacataaacagactgaaaatattaat
gtagcaaatgtgactcaatctacaccatccattaatctacctggaacacttcgcagcata
aaactgagttctggaaatggatataagttcctttcacctggaagattttttccttcttcc
aaatgttaa
DBGET
integrated database retrieval system
