Xenopus laevis (African clawed frog): 108715889
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Entry
108715889 CDS
T01010
Symbol
usp19.S
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108715889 (usp19.S)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108715889 (usp19.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108715889 (usp19.S)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108715889 (usp19.S)
Ubiquitin system [BR:
xla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108715889 (usp19.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
Motif
Other DBs
NCBI-GeneID:
108715889
NCBI-ProteinID:
XP_018116907
Xenbase:
XB-GENE-17338763
UniProt:
A0A8J0V8P4
LinkDB
All DBs
Position
4S:complement(116787806..116864002)
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AA seq
1475 aa
AA seq
DB search
MSHSARGTSQRRVTRGTADAINKKKQKDKANQECKEGKVAPNVEPKKDIVIDWKQNSEEV
IVKLNAGPRALNVEQLNAEFTDTDCVISFPEGQQWKCQFHEEIEGSCSKLQYKEKGNILQ
LILQKKIPFNKWPTLQKKRKEPLKEQVTARVHIEDGKPKSSLKLSLPDKSQSQTSESTDT
PKGKPHLGSVKRGQETTEASSGMKSSLTRKSIPTAVHSGVKTKRGFHKSASPVSGKDSSP
QSQKVASSEDLSSFAGGKGLNRRNVRNSTVAAQKSGDSHMELQNVQRDQNISLGKEKRPV
LDQQVLLQQAGPTVQPVCLHAMEKQNAPVDQNSVVPCKETLVSTYEQTLDCQQEPSKMDL
NVEVKEAVVKPLSDCTPSDATELDCLAEKVDSSSEDCLEETTEEPEPIVNLTFMKNDHYE
KGNDVVVVHIYLKEICKETSKVLFREQDFTLLFKTRDPNFMRLHPNSTPDTVFRWQVKLR
NLIEPDLCRFCFTGARVDISLQKKQSQRWGGLEAPATQGLNPEFYLLPKEQGAVGGAKVA
MPAGPPPLDKTQPGSNPHSLSNKEETRAVEKEKPRAEDTSLDKVTSRTTTDHVSVKSEQL
LATPKPTCMVPPMTHSGVSSENVQQEEEEEKRVCPPGFTGLVNLGNTCFMNSVIQSLSNT
RELRDYFQDRSFESEINCNNPLGTGGRLAVSFAVLLRALWKGTHHAFQPSKLKAIVASKA
SQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEEVADEAWLRHKMRN
DSFVVDLFQGQYKSKLVCPVCEKVSITFDPFLYLPVPLPQKQKVLTVFYFAREPHKKPIK
FLVSISKDNSNAAEVLESISKSVRVKAENLQLAEVVKNRFQRIFRPTCSLDSVSPNDLLF
CFEVLSKELSKERVLVFQVQQRPQVPSISITKCAACQKKQLSEEEKLKRCTRCYRVGYCN
QVCQKSHWPDHKTACRPENIGYPFLISVPESRLTYSRLAQLLEGYARYSVNVFQPPCIPG
RTSPDHAPQPLSTEKADLPLLGESSEEEKDFHSMQSSQTTLPPLALQSESGDPAIVHSKA
PGDRVSLYSTDSGFSEHITETVREVDSGGEKETVYEKSVKPEAAVAGFQQSESVNAHTSP
FYINVIDPNNKEMKLEDKGESPLELTEDCSLALVWKNNERVKEFVLVESKELECEEDPGS
ASEAARAGLFTLDQCLNLFTKPEVLAPEEAWYCPKCNQHREASKQLMLWRLPNILIIQLK
RFSFRTFIWRDKINDMVDFPVRNLDLSTFCIGQKEDHQTPVYDLYAVINHYGGMIGGHYT
AYARLPNEKNSQRSDVGWRLFDDSTVTSVDESQVVTRYAYVLFYRRRNSPVERPMRGPPA
HPADHRVDSGASADGAASQASLIWQELEAEEDELRRRLDLSRSCRALSNSQGTDVQLSEF
PDEVRIRYFFLGTMAAIVAFFLNIFYPFMYQSHGL
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattctgccaggggcaccagtcagagaagggtgactcggggcacagcagatgca
attaataagaagaaacaaaaagataaagccaaccaggaatgcaaagagggcaaggtggcc
ccaaacgtggagcccaaaaaagacattgtaattgactggaagcaaaattcggaagaagtc
atagtgaaattaaatgctggaccgagagctttaaatgtggagcaactgaatgctgaattc
acagatacagactgtgttatcagcttcccagaaggccaacaatggaaatgccaatttcat
gaggaaattgaaggttcttgcagtaaactgcaatataaagaaaaggggaatattttgcaa
ctaattctgcagaagaaaattccatttaacaaatggccaacacttcagaagaagaggaaa
gagcccttgaaagagcaggtaacagccagagtccatatagaagatggaaaaccaaaatcc
tctttaaagttatcgctacccgacaaatcccagtcccaaacatcagagagcacggacaca
ccaaagggtaaaccacaccttggaagtgtgaaacggggacaagaaacgacagaggccagt
agtggaatgaaaagcagccttacaaggaaatccatacctactgcagtgcacagcggagtc
aagacgaaaagaggcttccataaatctgcctctccagtctccggaaaggattccagtcca
cagagtcagaaagtcgcaagctctgaagacctttccagctttgcaggtggcaaagggcta
aacagacgcaatgtcagaaattcaactgtggcagcacagaagtctggagacagccacatg
gagctgcagaatgtacaaagggaccagaatatcagtttagggaaggagaaaaggcctgtt
ctggatcaacaggtactgctgcaacaggcaggaccaactgtgcagccggtatgtttacac
gctatggagaagcaaaatgcacccgttgatcagaattcagtggttccatgcaaagaaacg
cttgtgtccacatatgagcaaaccctggactgtcagcaggagccgtctaaaatggatcta
aatgtagaagtaaaggaggccgtggttaaacctctctcggattgcacaccctcagatgcc
actgaattggattgcctagctgaaaaagtggattcctctagtgaggattgtctagaagaa
acaacagaagagccagagccaatagtgaacctgacgtttatgaagaatgatcactatgag
aagggcaatgatgtggttgtcgtgcacatttacttaaaggagatctgcaaagaaacttct
aaagtgctgttccgggagcaagatttcacactcctcttcaaaacaagggatccaaatttc
atgcgacttcatccgaactccacgccagatactgtgttcaggtggcaagtaaaactcaga
aatcttattgaacctgatttgtgtcgtttctgtttcaccggcgctcgggttgatatttcc
ctgcaaaagaagcaaagccagaggtggggtggcttagaggcaccagccacacaaggtctg
aatccagaattctaccttttgcccaaagaacaaggtgcagtgggtggtgccaaggttgca
atgcctgctggtccacctccccttgataaaactcaacctggaagtaatccgcattctctg
tccaacaaagaggagaccagagcagtagagaaagagaagccaagagcagaggacaccagc
ctagacaaggtcacctccaggacaacaactgatcacgtctctgtaaaatcagagcagctt
ctggctacacccaaaccaacatgcatggttccaccaatgacacacagtggggtgagcagt
gaaaatgtgcagcaagaagaagaagaagagaaaagagtctgcccacctggttttactggt
ctggttaacctggggaacacctgcttcatgaacagtgttatccaatccttgtccaacacc
cgggagctgagagactactttcaagatcgctcttttgaatcagagattaactgcaataac
ccccttggaactggtggccgactggcagttagctttgctgtgcttttacgggccctttgg
aaaggaacccaccatgcttttcagccatctaagctcaaggcaatagtggccagtaaggca
agtcaattcacaggctacgcccagcatgatgcacaggagttcatggcttttctactggat
gggcttcatgaagatctcaacaggattcagaacaagccatacacagagactgtggattca
gacggaaggccagatgaggaggtggcagatgaggcctggctacggcataaaatgcggaac
gattccttcgtggtggatttgttccagggccagtacaagtccaagctggtttgtcctgtt
tgtgagaaggtgtccatcacatttgacccattcctgtatctgccagtgcccttgccccag
aagcagaaggttctcactgtgttttattttgcccgggagcctcacaagaagcctattaag
tttttggtgagcataagcaaggacaactctaatgctgccgaggtccttgagtccatctct
aagagtgtgcgagtgaaggctgagaatctgcagttggcagaggtggtgaagaaccgtttt
cagcgtatcttcaggccaacatgttctctggattctgtctcccccaacgacctgctcttc
tgttttgaggttctttctaaggaactttctaaggagcgtgtgcttgtgtttcaggtccag
cagcgcccccaggtgcccagtatctccattactaaatgcgcagcttgccagaagaaacag
ctgtctgaagaggaaaagctaaagcgatgtacaaggtgctatcgggtcggatactgcaac
caagtctgccagaagtcacactggcctgatcataagactgcctgccgaccagaaaacatc
ggctatcccttcctcatcagtgtcccagagtcacgcctcacctattcccgtctggcacag
ctactggagggttacgcaagatactctgtaaatgtattccagcctccctgtattccaggg
agaacatcaccagatcatgcacctcaaccactaagcacagagaaggcagatctacccctt
ttgggggaatccagtgaggaggagaaagattttcactctatgcagtcgtctcaaaccact
ctgcctcctctcgccttacagtctgagtccggagaccctgctattgtacatagcaaagca
cccggggatagggtctctttgtacagtactgattctggcttttcagaacacatcacagag
actgttagggaagtggattctggaggcgagaaagaaacggtttatgagaaatccgtcaaa
cctgaagctgctgttgccggttttcagcagtcggaatctgtgaatgcgcacacttctcct
ttctacatcaatgttattgacccaaataacaaagagatgaagttggaagataaaggtgag
tctcctttggagctgactgaagactgctctctggcacttgtctggaagaataatgagcga
gtgaaggagtttgtactggtagagtccaaggaactggagtgcgaagaggatcctggatct
gctagtgaagcagccagagctggacttttcactttggatcagtgtcttaacctcttcacc
aagcctgaagtcctggcaccagaggaggcctggtactgccccaagtgtaaccagcacaga
gaggcatccaagcagctgatgctctggcgacttcctaacatcttaataatccagctaaag
cgattctctttccggacgtttatctggagggacaaaatcaatgatatggtggactttccc
gtcaggaacctggacttaagcactttctgtatcgggcaaaaggaagatcaccagacgcct
gtctatgacctttatgcagttattaaccattatggaggaatgattggtggacactacacg
gcgtatgccaggctacctaatgagaagaacagccagcggagtgacgtgggctggagactg
tttgatgacagcacagtgacctcagtggacgagagccaagtggtgaccagatacgcttat
gtgcttttctaccggcgaaggaattccccagtggagaggcccatgcgagggcccccagca
cacccagctgaccatcgtgtggattcaggggcatcagcagatggggcagcgagccaggca
tcgctcatctggcaggagcttgaggcagaagaagacgaacttcgccggcgtctggacctc
tcccggagctgcagggcactctccaattcccaaggaacagatgtgcaactctccgaattc
cctgacgaagttcgtatccgatatttttttctgggcaccatggctgccattgtcgctttt
tttctgaacattttctatcccttcatgtaccagtcccatgggctgtag
DBGET
integrated database retrieval system
