Xenopus laevis (African clawed frog): 108715892
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Entry
108715892 CDS
T01010
Symbol
XB5969698.S
Name
(RefSeq) laminin subunit beta-4
KO
K06243
laminin, beta 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108715892 (XB5969698.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108715892 (XB5969698.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_II
COG6_N
F5_F8_type_C
DUF3540
Motif
Other DBs
NCBI-GeneID:
108715892
NCBI-ProteinID:
XP_018116916
Xenbase:
XB-GENE-18006023
UniProt:
A0A1L8GHT6
A0A974D1L3
LinkDB
All DBs
Position
4S:complement(116940007..117038809)
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AA seq
1853 aa
AA seq
DB search
MELWESTGLQRTLWESIRAKKLLLIYLLVTGQILGSLAQEPDVVHHGCTEGDCYPATGNL
LIGRAQSLSATSTCGMEGPQEYCIVSHLQDSEKCFFCDSRVPYRKESHQIENVIYLTEED
EEKTWWQSENGVELVSIRLDLEAEFHFTHLIMKFKTFRPAAMLIERSADYGRTWKVYRYF
SYNCTKMFPGVPIHALQKIDNIICDQRYSDIEPSSDGEVIFKVLDPAIPVEDPYSVEIQE
LLQITNLRINFTKLHTLGDNLLDQRPEVLQKYYYSVYELVVRGSCFCYGHASECSPVEGI
EAGVEGMIHGRCICKHHTKGLNCEQCQDFYHDLPWRPAEANDPHTCKPCNCNNHSRKCHF
DMAVYLATGKVSGGVCDDCQHNTMGRNCDLCKSFYYQDPRADIRADNACIPCDCDPVGSL
DGGVCDSHTNVNLGMIAGQCRCKENVKGERCDSCKVNFYGLSMNDPVGCQSCRCDPRGIV
AGNTPCDQISGDCYCKRFVTGRFCNQCLLEYWGLSNDITGCRPCDCDFGGAYNNKCSLED
GQCDCRPNIIGRQCGDVQPGYFCMPLDYYTYEAENAKGLSPTDPQLPGSPKPEAQTDCLE
YYNGIQNGKKVRLRRQRRMARVLHQRASQRRARQLQQKPDVEVIRREHNPDHMVTWTGQG
FARVRDGAGLLFQIDNIPYPMDYDIMIRYEPESAEDWEATVSVTSRILPMSPRCGNVLPS
EQIYKEKLPHTERYLVLPKPFCFESNNQYEISIRFQRWGAANRHPAAFILIDSLVLLPKV
YELPGFHGNDPVSVHHREEMERYMCLDSFKMATMPDLAEMCIKLLCSISAIIHDGALPCL
CDLQGSLSAVCDKIGGQCKCKPNVIGQRCDQCAPGTYGFGPYGCSKCDCHPQGSTSRLCN
SFTGQCQCQSNVAGRQCDQCLPRQWGYPQCRPCQCNGHSDECDPKTGACIRCRDFTTGRH
CDKCLDGYYGDPILGSGQQCRPCPCPGYPGSQNYHGSSCYADKDSHHIVCLCAPGYTGTR
CDSCSPGYFGNPEQEGGECRPCQCNNNIDPTDPTSCDSHSGMCMKCLYNTDGAHCEECKA
GFFGSAVQRNCRRCTCNEQGTLQSHCIRDLCYCDRVTGHCPCRANVLGKSCDQCVPNFWN
LGGNLGCEPCACDPAHSLRQDCNVFTGQCHCQPGFGGRVCSHCQENYWGDPQIKCEVCNC
DEYGSETAQCDHLTGKCFCRKGFTGRRCDQCARGFQNNYPLCLPCHECFAQWDMIISQLR
DKLRGIQQKLSDLQEGDVAPEISHLQIRELENKLRTIKELIEDGGVEGMKMLEQMNKLVN
KIRTEVAQLSYQLHTQEKQMNGTEAKDRRQRGKLDKLTIDITIVNETVYDLKVQIEAIVA
AEFNESYNSIVKSYLESTEAEKMANGSVYGPGSPVFQSQQTREETERLLKEKFDTYKRNM
TAQRSSLKELQKKVQRLNVSKINEKICGAPGDQECKDSPCGGANCRDEDGKRKCGGENCN
GALPISTKALITAQNITQELENMGNRLKDIAQKIQDIQGIAEEAKVQTEGTLANAKESKR
RMEDSTEKLREFIKQIKDFLTEEGAEPESIELVARQVLNISLPAGPGDITALVNEIKESI
GNLSCTDELLTNTSEILATAKNLQKQAKEAQAKAEAVSANISDAQGLLQEAETKAKSAEK
ALKKAKQSIKDVKSKVEQTMKTLTEVERTEMDIMERIGNLSEKSEDLMDKTESNRQIASS
AKERANLVLSSTGELRKEMDDVKKKYEDLKGKVGGLNSSSGTAMDRIEKIKKEAQALYKK
ASDAKKNLTELEEKFRANEANMTAQSLEIQRLENQTMELLNDIREKSYIYSTC
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgggaatccactgggttgcagaggactctttgggaatccatcagggcaaag
aagctcctgctcatctacttattagttacaggtcagatcctgggatctctcgctcaggag
ccagatgtggtacaccatggttgtacagagggagactgttatcctgccacaggaaacctt
ctcattggtcgtgcccaaagcctcagcgccacatccacctgtgggatggaagggcctcag
gagtactgtattgtcagtcatttacaggactcagagaaatgcttcttctgtgactcccgt
gtaccctaccgaaaagagagccaccaaattgagaatgtcatttatctgacagaagaagat
gaagagaagacctggtggcaatccgagaatggagtagaattagtgagcattcgcctggat
ctagaagcagaattccacttcactcatctcattatgaaatttaagacattccgccctgcg
gccatgctgatagagaggtctgctgattatggacgtacatggaaggtgtatcgttatttc
tcatacaactgcaccaagatgttccctggggtccccatccatgcactccagaagattgac
aatatcatttgtgaccagcgctattcagacattgagccatccagtgacggagaggtgatt
tttaaagtacttgaccctgccattccagtggaggatccatatagtgtagagattcaagaa
cttcttcagattaccaacctgaggattaatttcaccaaactccatacgcttggagataac
ctgttggaccagaggccagaagttctccagaagtattattactctgtgtatgagctggtg
gtgaggggaagttgcttctgctatggccacgcctcagaatgctcccctgtggaaggaatt
gaagcaggagtggaagggatgattcatggaagatgtatatgtaaacatcatactaagggc
ctaaactgcgagcaatgccaagacttttaccatgatctcccatggagacccgcagaagcc
aacgaccctcacacctgcaaaccgtgcaactgtaacaatcactcgaggaagtgtcacttt
gatatggctgtgtatctggctactgggaaggttagcgggggtgtatgtgatgactgtcaa
cacaacaccatgggacgcaactgtgacctctgcaagtccttctattaccaggacccccgg
gcagacatccgagcagacaatgcctgtatcccttgtgactgtgaccctgtagggtctttg
gatggtggagtctgcgacagtcacaccaacgtcaacttgggcatgattgccgggcaatgt
cggtgcaaagagaacgtgaagggagaacgttgtgacagctgcaaagtgaacttctatggg
ctgagcatgaacgatccagttgggtgccagtcctgtagatgtgacccacgtgggattgtt
gcagggaacactccatgtgaccagattagcggtgactgttactgtaagcgctttgtgact
ggtcgcttctgtaaccagtgcctgttggagtattggggtctcagcaatgatatcactgga
tgccgtccttgtgactgtgattttggaggagcctataacaacaagtgctccttggaagat
ggacagtgtgactgtcgccccaacataattggccgccaatgtggagatgtgcagccaggg
tacttctgcatgcctctggactactatacgtatgaagccgagaatgccaagggactctcc
ccaacagacccccagttacctggttctcccaaacctgaggctcagactgattgcttggag
tattacaatggtatccagaatggcaagaaagtgaggttgcgacgacaaaggagaatggcc
cgtgtgctgcatcagagggcttcccaacgccgtgcacggcaactccagcagaagccagac
gtagaggtaatccgacgtgagcacaatccagatcacatggtcacttggacaggccaagga
tttgctcgagtccgagatggagctggcctcttgttccagattgacaatatcccttatccg
atggattatgacatcatgatccgttatgagccagagtccgccgaggactgggaagccact
gtcagcgtgacatcacggatattacccatgagcccccgttgtggcaacgtattgccctct
gagcagatatacaaggaaaaactgccgcacaccgaaaggtacttggtcctcccaaaaccc
ttctgctttgaaagcaacaaccagtatgaaatcagtatccgattccagcgctggggagca
gccaaccgtcaccctgcagctttcattctcattgactcgctggtgcttctgcccaaggtc
tatgaactcccaggcttccatggaaatgacccggtgtcagtgcatcaccgggaagagatg
gaacggtacatgtgtctggattcctttaagatggccaccatgcccgacctggcagaaatg
tgcatcaaacttctctgcagcatctctgccatcatccacgatggagctctcccctgcctg
tgtgacctgcagggttccctcagtgccgtctgtgacaagataggagggcagtgcaagtgt
aagcctaatgtaattggccagagatgtgaccagtgcgctccagggacctatggattcggc
ccatatggatgcagcaaatgcgactgccacccacaaggttccacctccaggttatgcaat
tccttcacagggcagtgccaatgtcagagcaacgtagccgggagacagtgtgaccagtgc
ttgccaaggcagtggggttatcctcaatgtaggccatgccagtgtaacggccattctgat
gagtgtgaccccaagactggggcctgtattagatgccgagatttcactactggacgccac
tgtgacaaatgtttggatggatactatggggaccccatactgggctctggtcaacaatgc
cgaccctgtccttgcccaggttatcctggtagtcagaattaccatggaagctcctgctac
gccgacaaggattcccatcatattgtgtgcctctgtgcgcctggatatacagggacacgc
tgtgacagctgctctcccggttactttgggaatcctgaacaggaaggcggggagtgccgg
ccgtgccagtgcaacaacaacatcgacccaactgaccccacgtcatgtgactctcatagc
ggcatgtgcatgaagtgcctctacaacacagatggagctcactgtgaagagtgtaaagca
ggtttctttggcagcgccgtccaacgaaactgtcgccgatgtacgtgcaatgagcagggc
accctacaatcccactgcatcagagatctctgctattgtgatcgggtgaccgggcactgc
ccctgcagagccaacgtgctgggcaagagttgcgaccaatgtgtccctaacttctggaac
cttggggggaaccttggttgtgagccctgtgcttgtgacccggcccactccctccgacag
gactgcaatgtgttcacaggacaatgtcactgccaacccggttttggggggagagtctgc
tcacactgccaagagaattactggggcgacccacaaataaaatgtgaagtatgcaactgt
gatgaatacgggtcagagacagcgcagtgcgaccacctcactgggaagtgtttctgtcgg
aaaggtttcacgggacggagatgtgatcagtgcgccaggggctttcagaacaactatccc
ttgtgcttgccctgccacgagtgttttgcccaatgggacatgattatctctcagctccgg
gataagctccggggcattcagcagaaactgtcagacctccaggagggagacgtagcccca
gagatcagtcaccttcagattagggagttggagaacaagctgagaaccattaaagagctc
attgaagatggtggtgttgagggaatgaaaatgttggagcaaatgaacaaactagtaaac
aaaataaggactgaagtggctcagctctcatatcagctgcacacccaggaaaagcaaatg
aatggcacagaggccaaggacagaagacagaggggaaagctggacaaactgacaatagat
attactattgtgaacgagaccgtgtatgatctgaaagtgcaaattgaggccatagtagcg
gcagaattcaatgaatcgtacaacagtattgtgaagtcgtatttagaatccacagaagca
gagaagatggccaatggctccgtttatggtccgggaagcccagttttccagtcccagcaa
acacgggaagaaacagagcggcttctgaaggaaaaattcgacacctacaaaaggaacatg
acggctcagaggagctcattgaaggagctgcaaaagaaggttcagagactcaatgtttct
aaaatcaatgagaagatttgtggggcccccggagaccaggaatgtaaggactcaccatgt
gggggagcaaattgtagagatgaagatggaaagagaaaatgtggaggagagaactgtaac
ggagctctgccaatttctacaaaggcccttatcacagcacagaacattacccaggagcta
gaaaacatgggcaacaggctgaaagacattgctcagaagatacaagatatccagggaatt
gctgaagaggccaaggtccagacagagggcacactggccaacgccaaagaatccaagcgc
cgtatggaggattcaacagaaaagctgcgggaattcattaagcagattaaagattttcta
actgaagagggtgctgaaccagaaagcattgagttagtggctcgacaagtcttgaacatc
tctctgccggccggccctggggacattactgcactggtgaatgagatcaaagaaagtatt
ggaaatcttagctgcaccgatgagctcctgaccaacacctctgaaatcttggccaccgcc
aaaaacctgcaaaaacaagccaaggaggcacaggccaaggcggaggctgtgagtgcaaat
atatctgatgcccagggactgctccaggaggcagagaccaaagcaaaatctgcagagaag
gcattaaaaaaggccaagcagagcattaaagatgtgaaaagcaaagtggaacagaccatg
aagaccctgactgaagttgagcggacagagatggacattatggaacgaataggaaacctc
tctgagaaatctgaagacttaatggataagacagagtccaacaggcaaattgccagcagt
gcaaaggaaagagccaacttggtcctgtcctccactggagagctgaggaaggaaatggat
gatgttaaaaagaagtacgaagatctgaaagggaaggttgggggtttaaacagctcctcc
ggcaccgccatggacaggatagaaaagataaagaaggaagctcaggcactgtacaaaaaa
gcatcagacgccaagaagaaccttacagaacttgaagagaaattcagggccaatgaagcc
aacatgacggcacagagccttgagatccagagactggagaatcagacaatggaattgcta
aatgacattcgagagaagtcatatatatattctacctgctaa
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integrated database retrieval system