Xenopus laevis (African clawed frog): 108715920
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Entry
108715920 CDS
T01010
Symbol
tmf1.S
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108715920 (tmf1.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108715920 (tmf1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
108715920
NCBI-ProteinID:
XP_018116969
Xenbase:
XB-GENE-17342435
UniProt:
A0A1L8GI03
A0A974HMF3
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All DBs
Position
4S:121648029..121689849
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AA seq
1096 aa
AA seq
DB search
MSWFNTSHLSSFAKQAFSQAQKSIDRVLDIKEDETAWADSIIGPFEEENVSSLKGSWENS
NWGGQSEEPETQVVLSPTAITKPVTRSVVDESENFFSAFLSSPTSNTASDSSVVSKPPVK
SPRLKQEENYTSPTSTVKVKQKDEINLNLFKQSACKSQRADLETPDISSEKPVPHRSNVS
SELKCETEKEEQISSDITTDNGVPESRPIEELSSSSTAVTSESKDVALDNKEQKSEDRQS
NTPSPPISTFSSGTSTTSDIEVLDHESVMSESSVSSRQEAADSKANLHLMQTSFQLLSAS
AEYSRMEEFPKLTESCSSSDAFERIDSFSMQSMDSRSVSELNSDDEFPGRGCTLVSIAVS
SSSPNMDVHESVECKPEEDLNETLMVHSSENTEMEESGRSSTPVNSEQPDLLAHEGEDVC
HGVAAESLTEAETAPEAKFSNEDLQKTIDELTARLEKRETQLLSLSKEKAFLEEAYDNLN
DEMVRLKEECSSVALLKDEFTLRIAEAEKRAKTACKERDIAKKESKTTKEELATRLNSSE
TAEIMKEKDEQIKGLMEEGEKLSKQQLHNSNIIKKLRAKERENNHSISKQANKIREVEEE
LQLLKQTLDGKEEVEKQHRENIRKLNSMVERQEKDLARQQADLDELHENNRSLQAALDNS
YRELAELHKANASKASEAQEAALSCELRAKEELCFALEKAKEESQKQREALAIQVTDLRL
ALQRAEQQAARKEDYLRQEIAELQQRLQEGETRNQELSQSVTSATRPLLRQIENLQATLA
AQTSSWEKLEKNLSDRLAESQTLLASAVEKERASTEEVLTFKTQISAIESQNSLLRQEKS
RLQAQLEVEKSRLLKMEEDHSRNQVELENIKLEFMKAMEEAKKEKSLLSSQLEMEKLKVE
QEKKKVLLAQETAKEKERKAYMFPSMEPTATTPTLSRSSSISGTDASGLQTSIISQDDPH
DHLYGSMTASLSGSNLYEAVRLGAGSSVIENLQSQLKLRDGEIAQLQVEIVNLEKTRSLL
AEEVVKLNNLNDELEEKVKEIPKLRTQMKDLEQRYNTILQMYGEKAEEAEELRLDLSDVK
NMYKTQIDELLQQRLH
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacacttcgcacctctccagcttcgctaaacaggctttctcccaggcc
cagaagtctatagaccgagtactggatattaaggaagatgaaaccgcctgggccgactcc
atcattggtccctttgaggaagagaacgtttcatcactcaaagggagctgggaaaactcc
aattgggggggacaatcagaagaacctgaaacacaagtggtgttatctccgacagcaatt
accaagcccgttacacggagtgtagtggacgaatcagagaatttcttcagtgcctttctc
tcttccccgacatcgaacactgcctccgatagttctgtggtgtccaagcctcccgtcaaa
tctccgaggctcaaacaggaagagaactatacctctcccacatccacggtcaaggtgaaa
cagaaagatgaaattaatcttaacttgttcaagcaaagtgcctgtaagagccaaagagca
gatttggaaacaccagacatatcttcagagaaaccagtgccccaccgttcaaatgtctct
tcggaattaaaatgtgagactgaaaaagaggagcaaatatcttctgacattacaacagat
aatggagttccagagagcagacctattgaagaactctccagctcgtcgacggctgttact
tctgaaagtaaagacgttgcactggataataaagaacagaagtctgaggaccgtcagagt
aacaccccgtcccccccaataagcaccttttcctctgggacgtcaaccaccagtgatatt
gaagtgttagaccatgagagcgtgatgagcgagagctctgttagttcaaggcaagaagca
gctgattccaaagcaaacctccatttaatgcagacatctttccagcttctctctgcctct
gctgaatacagccgtatggaagagtttccaaagcttacggagagctgctcatcgtcggat
gcatttgagcggatagattcctttagcatgcaatccatggacagccgcagtgttagtgaa
ctcaattccgacgatgaatttcccggcagaggatgcaccctggtttccatcgcagtcagc
tcttcttctcccaatatggacgtccatgagtcagttgagtgtaaaccagaggaagactta
aacgagacactaatggtgcactccagtgagaatacggaaatggaggaaagtggaaggagc
tccactcctgtaaattcagagcagcctgatcttctggcccacgaaggtgaagatgtctgt
catggagttgctgctgaatctttgactgaagctgaaactgcaccagaagctaaattctca
aatgaggacttgcaaaagacgatcgatgaacttactgccagactggagaagagggagaca
caactgctatccttgagcaaggaaaaggccttcctagaagaagcttacgacaaccttaat
gacgaaatggtgaggctgaaggaagaatgtagcagcgtcgctctgctgaaagatgagttc
accctccggatagcagaagccgagaagagagcgaaaacagcatgtaaagagcgagacatt
gccaaaaaggaatcaaaaacaacgaaggaggaactggcaacaagattaaattcgagtgaa
actgcagaaatcatgaaagagaaggatgaacagattaaaggtttaatggaggaaggtgaa
aagctctccaaacagcagctgcacaactccaacatcatcaagaaattacgggcaaaagag
agagagaataaccactccatatccaaacaggcaaataagatccgggaggtggaggaggaa
ctgcagcttttaaagcagacattagatggaaaggaagaggtggaaaaacagcaccgagag
aatatccgaaagctgaactccatggtagagaggcaggagaaggatctggcgaggcaacag
gctgatctggatgaactgcacgaaaacaaccgcagtctacaagctgctctggacaactcc
tacagggaacttgcagaattacacaaagcaaatgcatcaaaggccagcgaagcccaagaa
gcggcactgagttgtgaactacgagccaaagaagagctttgttttgcactggagaaagct
aaggaggagtctcagaagcagcgagaagctttggctatccaagtaacagatctgaggcta
gccctgcagcgagcggaacaacaagctgccagaaaagaagattatctgagacaagaaatt
gctgagttgcaacagcgattgcaagaaggagagacacggaatcaggagctgagccagagt
gtaacatctgccacacggccattactccgacagattgaaaacctgcaagcaactttagca
gcgcagacctcatcctgggaaaagctggagaagaatctttccgacagacttgctgaatca
cagacgttgttggcctcagcagtggagaaagaacgtgcctccacggaagaagtgctcacg
ttcaagactcagatatccgctattgaatctcagaacagcctgttgaggcaagagaagagc
agactccaagctcagcttgaagtggagaagtctcgattattgaagatggaagaagatcac
agcaggaatcaggtggagcttgaaaatataaagctggaattcatgaaagcaatggaagaa
gcaaagaaagaaaagagtcttctctccagtcaactggaaatggagaagctgaaagtggaa
caggagaagaaaaaggtcctgctggcacaggaaactgctaaagagaaggaacgtaaagcc
tatatgtttccctcaatggaacccactgccacaactccaactctatctcgctccagttct
attagtggaacagacgcgtcaggtcttcagacatccatcatttcccaggatgatccccat
gatcatttgtacggatcaatgacggcgtccctcagcggaagcaatctctacgaagcggta
cgattgggcgctggttccagtgtcattgaaaacttgcagtctcagctaaaactccgagat
ggggaaatcgctcagcttcaggttgaaatcgtgaacctggaaaaaacccgctcactacta
gccgaggaagtggttaaattgaataacctaaatgacgagcttgaggagaaagtgaaggaa
atacccaaactacggacacagatgaaggatctggagcagcggtacaacaccattctgcag
atgtacggagagaaggccgaggaggcagaggaactgagactggatctgtcagatgtaaaa
aacatgtacaagactcaaatagacgaactattgcagcagagactccattag
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