Xenopus laevis (African clawed frog): 108716220
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Entry
108716220 CDS
T01010
Symbol
clstn2.L
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108716220 (clstn2.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Cadherin related
108716220 (clstn2.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
V_ATPase_I
PFF1_TM
CDC45
Motif
Other DBs
NCBI-GeneID:
108716220
NCBI-ProteinID:
XP_041419335
Xenbase:
XB-GENE-6488954
UniProt:
A0A8J1KPV0
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Position
5L:131285362..131726465
Genome browser
AA seq
949 aa
AA seq
DB search
MTGMAIYWVTVAACILGVGCSGLATKVNKHKPWIETSYHGVITENNDTVILDPPLVALDK
DAPVPFAGEICAFKIHGQDTPFEAVVLNKTSGEGRLRAKGPIDCEIQKEYTFIIQAYDCG
AGLAGTNWKKSHKAVVHIQVNDVNEFAPVFKEKKYSAMVTEGKIYDSILQVEAMDEDCSP
QYSQICNYEIVTRDVPFAIDRNGNIRNTEKLSYDKQHQYEIKVTAYDCGQKHATEDVTVL
VDIKPVCKPGWQDWEKRIEYNPGSGSIALLPTVRLETCDGPVSFIRTSIELQTNHIGKGC
DRETYSDTSLKSLCGASSGAIDLLPSPSASTNWTAGLPMDNSGMIFKFDGKQGVKIPDSI
VPKNLTDQFMITMWMKHGPSPGLRAEKETILCNSDKTEMNRHHYALYVHNCRLVFLLRRD
FDQADTFRPAEFHWKLDQICDKEWHYYIINIAFPVVTLYMDGATYEPYLVTNDWPIHPSH
IAMQLTVGACWQGGEVTKPKFTQYFHGSIAGLMLRPGKIESHKMISCLQACKEGLDIKSL
ENLGQGVKYHFNPSQSALVMEGEDIESINQALRKVSYINSQQFPTAGKRKLKVSSKVQCF
GEDICITIPDIEAYITVVQTNEPKITVTGMDHFARPASEFENANGVILLPDIRITSTVTK
MEKRLSKNVGKSTAPVVVEETLHHLDFCDILVSGEELDVKRECLELDRTVLQGKHLEATN
STKGYSIYGVGTMKSYEDVLQQIRYRHWDSASIFGRKFKVKCSELNGRYTSNELNLEVNI
LHNSNFMEHVNHMMIQPEFMPSLQNPSTDLSRHETRVSPGATAIVLVACVSILVIIVVLG
IFRLRMVHQHDFQEKEAAKDNELNWDDSALTITVNPMEKYETHGTDEGESEVEEDDEIEE
EDDDEEEDESTSGDSDESDEEDMETNAKAKQHNAARRGHLTWDHLTLTY
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgacagggatggcaatttactgggtgacagttgcagcttgtatcctgggtgttggctgc
agtggcctcgctactaaagtgaacaaacacaagccttggattgagacttcgtaccatgga
gtcatcactgaaaacaatgacactgtgattctagatccacctttggttgctctggataaa
gatgccccagttccttttgcaggggaaatatgtgcattcaaaattcatggacaagatact
ccttttgaagctgtagtgctgaacaagacatcgggtgaaggccgtctcagagcaaaagga
ccaattgattgtgaaattcagaaggagtacacctttatcatccaggcttatgactgtggt
gcaggtctagctggaacaaactggaagaagtctcacaaagctgtagttcatatacaagtg
aacgatgtgaacgagtttgcaccagtgtttaaagagaagaagtacagtgccatggtgaca
gagggaaagatctatgacagtatcctacaggtggaggcaatggatgaggactgctccccc
caatacagtcagatctgcaattatgaaattgttacacgcgatgtgccatttgctattgac
aggaatggaaacataaggaacacagagaagctgagttatgataagcaacatcagtatgaa
attaaagttactgcatatgactgcggacagaagcatgccacggaggatgtcacagttctt
gtggacattaagcctgtctgcaaacctggatggcaagactgggaaaaacgcattgaatac
aatcctggttctgggagcattgccttgcttccaactgttcggctagaaacttgtgatgga
cctgtgtcttttatccgaaccagtattgagcttcagacaaatcatattgggaaaggctgt
gaccgtgaaacttactctgatacgtcactaaagtcattatgtggagcctcttccggtgcc
attgacttactcccctcacccagtgcttcaacaaactggacagctggtctacccatggat
aacagtggcatgatctttaaatttgatggcaagcaaggagtaaagatacctgattcaatt
gtaccaaagaatctaactgaccaattcatgatcacaatgtggatgaaacatgggccaagt
cctggattaagagctgaaaaggagaccatcctatgtaactctgataaaacagagatgaat
cggcaccactacgctctgtatgtgcacaactgccgcctcgtattcctattgcgccgagac
tttgatcaagcagacactttcagacctgcagagttccactggaaactggatcagatctgc
gacaaggaatggcactactatataatcaacatagcttttccagtggttaccttatacatg
gatggagccacatatgagccatatctggtcaccaatgactggcccattcatccttcccac
attgccatgcaactgacggttggtgcttgttggcaaggtggggaagtcacaaagcccaaa
tttactcagtactttcatggaagcattgctggtcttatgctgcgtcctggcaaaattgaa
agccataaaatgatttcctgcttacaggcctgcaaagaaggactggatatcaaatcccta
gagaatctggggcaaggtgtaaagtatcacttcaacccttctcaatccgctcttgtaatg
gaaggtgaagacattgaaagtataaatcaggctctccgcaaggtctcatacatcaactct
cagcagttccccactgctggtaaaagaaaactgaaggtgtcatccaaagtccaatgcttt
ggagaagatatttgcatcacaatacctgatatcgaagcatatattacggttgtccaaaca
aatgaacctaagataacagtcactggaatggatcactttgcacggccagcatccgagttc
gaaaatgcaaacggtgtcattttattgccagatattcgaataaccagcacagttacaaaa
atggagaagagactgagtaagaatgttggaaaatctactgccccagtagtggtggaagaa
actctacatcacttggacttctgtgatattcttgtcagtggggaggagctggatgtcaaa
agggagtgcttagagctggatcgcactgttctccaaggcaaacatctggaggccacaaat
tctactaaagggtactcaatctatggtgtgggtacaatgaaaagctatgaggatgttctt
caacaaatacgctaccggcactgggactctgcatcaatctttggccggaaatttaaagtc
aagtgctctgaattaaatgggcgttacacaagtaatgagcttaacctcgaggtcaatata
ctgcacaattcaaattttatggagcacgtaaatcacatgatgatacagccagagtttatg
ccatcactgcaaaatccaagcactgacttgtccaggcacgaaacacgtgtttctccaggt
gctaccgccattgtgttagtggcctgtgtcagtatactggttattattgtagttttgggg
atcttcagattgcggatggtgcaccagcatgacttccaagaaaaagaggctgcaaaagat
aatgaattaaattgggatgactcggctctgactatcacagtaaacccaatggagaaatat
gaaacgcacgggacggatgaaggtgagagtgaagtagaggaagacgatgaaattgaagaa
gaggatgatgatgaggaagaggatgagagtacaagtggtgactctgatgaaagtgatgaa
gaagatatggaaacaaatgcaaaggcaaagcaacacaatgcagcaaggagaggacacctg
acatgggatcacctaacacttacatactaa
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