Xenopus laevis (African clawed frog): 108716427
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Entry
108716427 CDS
T01010
Symbol
six2.L
Name
(RefSeq) homeobox protein SIX2 isoform X1
KO
K19472
homeobox protein SIX2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108716427 (six2.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108716427 (six2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Motif
Other DBs
NCBI-GeneID:
108716427
NCBI-ProteinID:
XP_018118036
Xenbase:
XB-GENE-17340466
UniProt:
A0A974HJ10
A0A1L8G6B6
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All DBs
Position
5L:7432564..7445691
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AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILEGHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYGHNPYPSPREKRELSEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNSNSHNPLSTSMNGGKTVLGSSDDDKTPSGTPDHTSSSPALLLGG
NPGLQALHGMSHPQGPSAIPVSSADPMHHHTLQDSILNPMSSNLVDLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcttccgacctttggcttcactcaggagcaagtggcgtgcgtgtgtgaggtg
ctgcagcaggggggcaacatcgagcgattgggccgattcctgtggtcgctcccggcctgt
gatcacctccataagaacgagagtgtcctcaaggccaaggccgtggtcgccttccaccgg
ggcaacttcagggaactctataaaatcctggagggccaccagttctctccgcacaatcac
cccaagctgcagcagttgtggctcaaggctcattatgtggaggccgagaagctccgcggg
cgacccctgggggcggtgggcaaataccgggtgcgcagaaagttccctctgccccgatcc
atctgggacggagaagaaaccagttactgcttcaaggagaagagccggagtgtcctgagg
gaatggtacggccacaacccctacccctcgccccgggagaagagggaactgtccgaggcc
accggactcaccaccactcaggtcagtaactggttcaagaaccgacgccagcgcgaccga
gcggccgaagccaaagagaggtacgaggaaaataacgaaaactcaaattccaacagccac
aacccattgtccacttcaatgaacggagggaaaacagttcttgggagctcagacgacgac
aaaactccatcggggaccccagaccacacttcgtccagcccggcgttactcctcggtggg
aatcctggtcttcaggctcttcatgggatgagccacccacaaggacctagcgccatccca
gtgtcttcagcagaccccatgcaccaccacacactgcaggactcaatcctcaaccccatg
tcgtccaacttggtagaccttggctcctaa
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