Xenopus laevis (African clawed frog): 108716557
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Entry
108716557 CDS
T01010
Symbol
gtf2h3.L
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108716557 (gtf2h3.L)
09124 Replication and repair
03420 Nucleotide excision repair
108716557 (gtf2h3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
108716557 (gtf2h3.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
108716557 (gtf2h3.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108716557 (gtf2h3.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108716557 (gtf2h3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
108716557
NCBI-ProteinID:
XP_018118252
Xenbase:
XB-GENE-6487978
UniProt:
A0A1L8I1I6
A0A974I4S7
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All DBs
Position
1L:complement(174756682..174778456)
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AA seq
340 aa
AA seq
DB search
MSAWRAERRRPDMADVIRVRQYNGCFIVRGRVAMASDDEVNLLVIVVDVNPIWWGQQALN
HSEVTLPKCIDAVMVMGNSHLFMGRNNKLAVIASHIQESRLLFPGKRWKCGDLCAEASIL
ESNASGSKDGKYELLTAANEMIAEDIKELMTKTGQIHGQKTETVLAGSLAKALCYINKIA
KDTKAGQEVKSRILVIKAAEDSALQYMNFMNVIFAAQKQSILIDACVLDTDSGLLQQACD
ITGGIYLKIPHANSLLQYLLWVFLPDPDQRSHLNLLPPIHVDYRAACFCHRNLIEIGYVC
SVCLSIFCNFSPICTTCETAFKISLPPVMKAKKKKLKPMI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatggcgagcagaaagaagacgccctgacatggcagacgtcatccgagtgcga
cagtacaatggctgtttcattgtgagagggagagttgctatggcttctgatgatgaagta
aatctgttggtcattgttgttgatgtgaatcccatctggtggggtcagcaggcactcaat
cattcagaggtaacacttccaaaatgcatcgatgcagtaatggtgatggggaattcccat
ctgtttatgggtcgtaataacaagcttgctgttattgccagtcacattcaagagagccga
ctcctgttcccgggaaagcgctggaaatgtggtgacctttgtgcagaagcctccatcctt
gaatctaacgcatctggaagcaaagatgggaaatatgaattactgacagcagcgaatgaa
atgattgcagaggatattaaggaactcatgaccaaaacagggcaaatacatggacagaaa
acagagacagtgctagcaggatccttggcaaaagcactctgttatattaacaaaatagcc
aaagatacaaaagcaggacaggaagtgaagtccaggattttggtaatcaaggctgcggaa
gacagtgcgttgcagtatatgaattttatgaatgtaatatttgcagctcagaagcagagc
attctcatagatgcctgtgttttagacactgattctggacttctacagcaggcttgtgac
attactggaggaatttatctaaagataccacatgccaactctttgttgcagtacttgttg
tgggtgtttcttcctgatccagatcagaggtcccacctcaatctacttcctcctattcat
gttgattacagagctgcatgcttttgtcatcgaaaccttattgaaattggatatgtgtgc
tctgtatgcctatcaatattctgtaactttagtcctatctgcaccacttgtgaaactgcc
ttcaagatttctctgcctcctgtaatgaaagccaagaaaaagaaattaaaacctatgatt
tag
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