Xenopus laevis (African clawed frog): 108716588
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Entry
108716588 CDS
T01010
Symbol
vps54.L
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108716588 (vps54.L)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108716588 (vps54.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108716588 (vps54.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
108716588 (vps54.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
108716588
NCBI-ProteinID:
XP_018118314
Xenbase:
XB-GENE-6487914
UniProt:
A0A8J0V9Y2
LinkDB
All DBs
Position
5L:31342052..31388993
Genome browser
AA seq
982 aa
AA seq
DB search
MYAMASSHSSSLVPHSNSNKAFYKKGLEPAQQVGMVRSLPDVCPKEPTGDTKSLRDEPSV
VADQHKWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGQDFMESEVLPSPYLPAITKEQF
LSYSQQTITREKSHEKWKSVCPLKEDFDRPAYSHVLKSRADLEQVPKIFMKPDFALEDSL
TFNAVLPWSHFSSAGGKGSRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTS
QHELQDYLRKTSQAVKMLRDKISQIDRVMCEGSLRILRQALTRNNCIKIYNKLKLMATVH
QTQPTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLSSQLCELEKLIDKMIISE
FTSYARSDLNRLLEEDSHVVEEERLVSLVFGMLKQRKLDFFEIYSEEMMATAKTIIKQCV
VNTVSQIDEIDSEIVAKLTDQIRMMSFSQWFGLLENIFSKFTIFIQRVKATLSVIRNVVL
MVLDKNQRVREMEILAAQQSIRRESNVDNDLAYLTHEGLFISDAFSEGELPNAAANTNFQ
RNASPSSSSEPSGSDIVSDPECTTDSSSSKEHTLPSVTPGGIEIILNEEMKLTDLELGKI
ANSIQELLYDASDICHDRCSKFLLARAKEGFLEKLNSAEFVSLSRAVEAFVLDTEKICGR
RSMSLRGALQSQANKFVNRFHDERKTKLSLLLDNERWKQADVPAEFQDLVDSIKDGKILL
PERKSGGTEERKPTDFLTVDGQKYAVIGTVLLLIRIILEYCSCVDDIPSVTTDMLTRLSD
LLKYFNSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPLIRAHFEARMQPK
QYSMLRHFDHITKDYNDHISEISAKLVTIMDGLFEKLLSKYEVKAPVPSTCFRTICKQMG
KMHEAIYDLLPEEQTQALFLKINSSYIFHLKRQLCHLNVSNDGGPQHGLVAADIAFYTEN
VQALKGLKDLDLSLAEIWEQKR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatggcctccagccacagttcttcactagtgcctcattccaacagcaacaaa
gctttttacaaaaagggtcttgagcccgctcagcaagtgggaatggtgcgatcactgcct
gatgtctgccccaaggagcctacaggtgatactaaaagtttgcgtgatgaaccatctgta
gttgcagatcagcacaaatggacaatatatcattccaaagtaaatcttccggcagcatta
aatgacccccgcctcgcaaaaagggagtccgattttttcacaaagacgtgggggcaagac
tttatggaaagtgaagtcttaccatcaccctacctcccagcaattactaaggaacagttt
ttatcatactcgcagcaaaccatcactagagaaaaaagtcatgaaaaatggaagagtgtt
tgcccattaaaggaagactttgacagaccagcctattcccatgtactcaaatccagagca
gatctggaacaagtacctaagatttttatgaaaccagactttgccttggaggactcctta
acatttaatgctgttttaccatggtctcattttagcagtgctgggggaaaaggaagcaga
gatgcagcatcctccaaattgcttcaagaaaagctaagccactacttggatattgttgag
gtgaacatcgctcatcaaatctccttgcgttctgaagcattttttcatgctatgacctct
caacatgagctgcaggactacctcaggaagacttcccaggctgtgaaaatgctgcgggac
aagatctctcagatagacagagtcatgtgtgaaggatctctgcgaatcctgcggcaagca
ctgaccaggaacaattgcattaaaatatacaataagctcaagttaatggctacagtgcat
caaactcagcctactgtacagcttctattatcaacctctgagtatgtaggagctttggac
ttaatagcaacaacacaagaggttttgcagcaggaattacagggtattcacagttttcga
catctcagctcacaactttgtgaattggaaaaactgattgataaaatgatcatctccgaa
tttacatcatatgctcgcagtgatttaaacagactattggaagaggacagccatgtagtt
gaagaggaacggctggtgtccctggtatttggcatgttgaagcagcgaaaactggatttc
tttgagatctactcagaagaaatgatggcaacagcaaaaactatcatcaagcagtgtgtg
gttaacactgtgtcacagattgatgaaatagactcagaaattgttgcaaagcttactgat
cagattcggatgatgagtttttctcagtggtttggcttgcttgagaatattttttctaag
tttacgatttttattcaaagagttaaggcaacgctaagtgtcatccgtaatgtagtgctg
atggttttagataaaaatcagcgagtgagagaaatggaaatattggcagctcaacagagt
atcaggagggaaagcaatgtggacaacgatctggcgtacttgacgcatgaaggcttgttt
ataagtgatgctttcagcgaaggtgagcttcccaatgctgctgccaacactaactttcaa
aggaatgcatcacccagcagcagcagcgagccctctggcagcgatatagtatctgatcct
gaatgcactacagactcttcttccagcaaagaacacacactgccttctgttactccaggg
ggaatagagataattctaaatgaagaaatgaagttaactgacctggaacttggtaaaatt
gccaacagtatacaggaattactgtacgatgcatctgacatctgccacgaccgctgcagc
aagttcctcctagcaagggctaaggaggggtttcttgagaagctgaactctgctgaattt
gtgtccctctcgcgggcagttgaagcatttgttttggacactgaaaagatctgtggtcga
aggagcatgtcactgagaggggcgctgcaaagccaagccaacaaatttgtgaatcggttc
catgatgaaagaaaaactaaactgagcctcttgcttgataacgaacgctggaaacaagcg
gatgtcccagctgaatttcaggacttggtagactctataaaggatggtaaaatattgctt
cctgagagaaaatctggaggtacagaagaaaggaagcccacagactttcttacagtggat
ggacagaagtatgcggtgattggcacggtgctacttttgatcagaatcattctcgagtac
tgcagctgtgtggatgacatcccttcggtaactacagacatgttgactcggctgtctgat
ctcttaaagtattttaattcacggagttgccagttagttctgggagcaggagcattgcaa
gtggttggcctgaagacaataaccaccaagaaccttgccttgtcttcgcgttgcttgcag
cttatagttcactatattcctctaataagagcccactttgaagcccggatgcagcctaag
cagtatagcatgctccgccattttgaccatataaccaaggactacaatgaccacatttca
gagatttctgccaagcttgtgacaataatggacggcctgtttgaaaagctgctttccaag
tatgaggtaaaagccccagtcccttctacgtgttttagaaccatctgcaagcaaatgggc
aaaatgcatgaggccatttatgaccttcttcctgaagagcaaacgcaagctctgtttctt
aaaataaattcaagctacatatttcatttgaagcgacagttgtgtcatttaaatgtcagc
aatgatgggggaccacagcatggattggtggcagcagacattgcattctacaccgagaat
gtacaggctctgaaaggcctgaaagatctggatctcagcttggctgaaatttgggagcag
aaaaggtga
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