Xenopus laevis (African clawed frog): 108716690
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Entry
108716690 CDS
T01010
Symbol
stxbp5.L
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108716690 (stxbp5.L)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108716690 (stxbp5.L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108716690 (stxbp5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
108716690
NCBI-ProteinID:
XP_018118532
Xenbase:
XB-GENE-17335741
UniProt:
A0A8J0VFZ4
LinkDB
All DBs
Position
5L:complement(49876922..50057298)
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AA seq
1178 aa
AA seq
DB search
MKKFNPIRKVLDGLTAVSSSSSSSSSCQPGNRELEITEILHSEHFQLCKTVRHGFPYQPS
ALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALTDDT
LHLWNLRQKRPAVLHSLKFSRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVI
MWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGIVVLWDLKSKKGDYRYTYDEAIH
SVAWHHEGKQFICSHSDGTLTIWNVRSPAKCIQTIVPHGKQIKDGKKPEPCKPILKVEYK
TTRYGDPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDVQE
PYAVVVLLEKDLVVIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSVGA
RQKRQGYSKKEWPISGGNWGVGTQSYPEIIITGHADGSIKFWDASAITLQVLYKLKTAKV
FEKSRNKDDKPSTDIVDEDPYAIQMISWCPESRVLCVAGVSAHVIIYRFSKQEVTTEVIS
MLEVRLLYEINDLESPDIEQVATPSGGPNSQPIVFQSHPSTSSSSSDGIRDNVPCLRVKS
SALKQSAGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNCNGIAIVDYIQKAVLL
NLGTVELYGSNDPYQRQPRSPRKTRQPSGGMLTVASCMCGLSSLYSESVKKLRSSYITGL
SDINESTVASEDRCKSPTSGCTSNSSDEEQTKSKFIEKVKIKGRRLSKAIVTDLAKMSRK
LSLPTELKPELVPFLDVRDNSFSRSRSSSVTSIDKESREAISSLHFCETFTRKPDVSTSP
CLWVGTTLGTVLVIVLNLPPGCEQRLLQPVIVSPSGTILRLKGAILRMSFLDTLGALIPP
ASESWREPNVPEDKDDKDRLKKRRPVSVSPSSSQEISENQYAVICSEKQAKVISLPSQNC
IYKHNITETSFVLRGDIVSMSNSTCLACFCANGHIMTFSLPSLRPLLDVNYLPLTNMRIA
RTFCFTNNGQALYLVSPTEIQRITYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFG
GGAQSLDREDLFGETASGKPSRSLAQHIPGPGGIEGVKGAASGVVGELARARWALDERGQ
KIGELEERTTAMLASADSFSKHAHDMMLKYKDKKWYQF
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaaccccatcaggaaggtgctggacggcctgacagccgtttcctcctct
tcatcttcttcttcttcgtgccagcccgggaacagggagctagagattacggagatcctc
cattccgagcacttccagctgtgcaagactgtccgccatggattcccttatcagccctca
gccttggcatttgatccagtgcagaagatccttgcaattgggacccagactggtgctctg
cggctatttggtcggccaggagttgaatgctattgtcagcatgacagtggagctgcagta
atacagcttcagttcctgattaatgagggagctctagtgagtgccttgacggatgacact
ttacatttatggaacctgcgacagaagagacctgctgtactgcattccctaaaatttagt
agagaaaggataacattttgccacctgcctttccagagcaaatggctctacgtgggaaca
gaaagaggcaatattcatattgtcaacgtggagtcgttcactctctcaggctacgtcatc
atgtggaataaagccattgaactgtcatccaaatcacacccaggaccagttgtccatatc
agtgataatccaatggatgaagggaagctcctgattggttttgaatctggaatagtagtg
ttatgggacctcaagtcaaagaaaggagactacagatacacctatgatgaggctattcat
tctgttgcttggcaccatgaaggaaagcagtttatctgcagccattcagatggaacttta
accatatggaatgtacgctctcctgccaagtgcatacagacaatcgtgccgcatggtaaa
cagataaaagatggaaaaaagccagaaccttgcaagcctatcctgaaagttgaatataaa
acaacaagatatggggatccttttatcatcctttcgggtggcttatcgtatgatactgtt
ggaagaagaccttgcttaactgtaatgcatgggaagagcactgctgtcttggaaatggat
tatcctattgtagacttcttaaccctttgtgaaactccctatccaaatgatgtccaggaa
ccatatgctgttgttgtactcctagaaaaagatttagttgttatagatcttgcacaaaat
ggatatcctatatttgaaaacccttatcctctgagtatacacgagtctcctgtcacatgc
tgcgagtactttgctgattgccctgtggatcttatccctgcactttactcagttggggcc
aggcaaaagcgacaaggttacagtaaaaaggaatggcccatcagtggtggtaattggggt
gttggcacgcaaagctatcctgaaataattatcacaggccatgcagatggttcaatcaaa
ttttgggatgcttcagcaataacgctgcaagttctgtacaagttaaagactgcaaaggtt
tttgagaaatctcgaaacaaagatgacaagccaagcacagacattgtagatgaagacccg
tatgccatccagatgatctcctggtgcccagaaagcagggtgctttgtgtggctggagtg
tcagctcacgtcatcatttacagattcagtaaacaggaagttaccacagaagtcatttcg
atgcttgaagttcggttgctctatgaaattaatgatttagagtcccctgatattgaacaa
gtggcaacacctagtggaggacccaactcccaacctattgtttttcaatcacatccgtcc
acaagcagcagttcttctgatgggattcgagacaacgtaccttgtttaagggtaaaaagc
tccgctttaaagcaatctgctggttatcaagtggaactagttatacagcttgtgtgggtc
agcggagaacctccacagcaaataaccagtctggctgttaactctgcctacgggctagtt
gtttttggcaactgcaatggtattgcaatcgttgactacatccagaaagctgttctcttg
aacctcggcacagttgaattatatggctcaaatgatccctatcagagacagccacgatct
ccacgcaaaacacgacaaccctcaggaggtatgctgactgtggcttcttgcatgtgcggc
ctatctagcttatattctgagtctgtgaaaaaactgcgctcttcttacataacgggcctt
tctgacattaatgaaagcacggtggcatcagaggatcgctgtaaatcccctacttcaggt
tgcacgtccaattcttctgatgaggaacaaacaaagagtaaatttatagaaaaggtgaag
atcaaaggcagaaggttatccaaagcgatagtcactgatctagcaaagatgtcaagaaag
ctaagcctacctacagaattaaagcctgaattagtgccgtttctagatgttagagacaat
tccttcagtcggtccaggagctccagtgtgacaagcattgacaaggaatcacgggaagca
atatcatctctgcacttttgtgagacattcaccagaaaacctgacgtgtcaacatcccca
tgtttgtgggtgggaacaacgctgggtactgtgttagttattgtactgaacctaccaccg
ggttgcgagcagagacttctacagcctgtaattgtgtctccaagtgggaccatactgagg
ttaaagggtgcaatcttaagaatgtcatttctcgacacactgggagctttaattccacca
gcatctgaatcctggagggaacccaacgtacctgaagataaagatgataaggatcgattg
aaaaaacggaggccagtgtccgtctcaccctcctcctctcaggaaatcagtgaaaaccaa
tatgcagtgatctgttctgaaaagcaagcaaaagtgatctctttgccctcccagaactgc
atttataaacacaacataacagagacttcttttgttctacgaggagatatagtgtcaatg
agtaatagcacctgccttgcatgtttctgtgccaatggacatattatgacttttagtttg
ccaagtttaaggccgctgttggatgtaaattacttgccacttaccaacatgcggatagcc
agaacattctgcttcacaaacaatggacaggcattgtatctcgtctcacccacagaaata
cagagaattacctatagtcaagaaacctgcgagaatttacaggaaatgttaggagagctc
ttcaccccagttgaaacaccagaagctcctaacagagggttcttcaaaggcttatttggt
ggaggggcacagtcacttgatcgagaggatctttttggagagactgcatctgggaaaccc
tcaagaagccttgcccagcacatccctgggcctggtggaattgagggagttaagggagct
gcatcaggagttgtcggagaacttgctcgtgcccgatgggctttggatgaaagagggcag
aaaataggggagctggaggaaagaacaaccgctatgcttgccagtgcagactccttttca
aaacatgctcatgatatgatgttaaagtataaagataagaagtggtatcagttctga
DBGET
integrated database retrieval system
