Xenopus laevis (African clawed frog): 108716730
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Entry
108716730 CDS
T01010
Symbol
arid4b.L
Name
(RefSeq) AT-rich interactive domain-containing protein 4B isoform X1
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108716730 (arid4b.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
108716730 (arid4b.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
ARID
108716730 (arid4b.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108716730 (arid4b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
DUF4537
PTM_DIR17_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
108716730
NCBI-ProteinID:
XP_018118599
Xenbase:
XB-GENE-17345347
UniProt:
A0A1L8G893
A0A974CV76
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All DBs
Position
5L:complement(58439326..58534055)
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AA seq
1251 aa
AA seq
DB search
MKSLDEPPYLSVGTDVSAKYRGAFCEAKIKSTKRLVKVKATFRQDSSTVEVPDDHVKGPL
KVGAVVEVRNPDGIYQEAVISKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAQSETL
DQLPLTNPEHFGTPVIGKKTNRGRRSNQIHEEESSSSSSAEDENECETSDELIGTVVCVD
VGDKKKATWVPTLVVSPDCCDDITVKKDFVLVRSFKDGKFASVPRKEIRNINEISTKHDI
FKQALDHALEFCKSKTIPANWITEVKEGSSSSETEDDEEENKDDDDNDSTNEAEEEVEPF
PGEREIFIQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFNNIDSGAIWKQV
YQDLGIPILNSAAGYNVKCAYRKYLYGFEEYCTSASISFHMELPTKVAQKICKECVHENK
VSVKQESESQGETFKEEFDAKHETINKEVNLNEVKDSTVKEIIGTSLCNESKVKEVEEHI
AVNQETILEEFTPKIEETKITDKQENAEAEIKTEEEIDENQNMEIENEDSAEGEEFESYP
SGMKVQVRYGRGKNQKLYEASVKDSDVEGGEVLYLVHYCGWNVRYDEWIKADKIVRPADK
SVPKIKHRKKIKNKLEHNKDKPERGECSPKHCRLFPRPLFQPRDLENESTLDDPENKHSI
QGPPTMVEITSILNGLQAAENSAEDSETDHSSLNMDKEGKEFDMNHIGFDINQRLDDNKS
FPRAEGNYTADDPIMEVIPRSPVKTIEGSSDDTDYEVKSVRQSKFIKNDIAKSQDKRGKR
KYTEIGKARSHIGNEEYFKCNKTIGRLDAGSMTSSDDEEKSNPKHALSNKYNGFDDKRKS
MRTGFYTSFSESPEKRIKLLNNSEERLRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEGA
TSPSARNLDDTSSVQQSHENIRMSSSEVSKPEKDNGLKPVDERTAEMGDKKIDFPSSGSN
SVLNTPPTTPESLSTLSDCQKQPSKSDILDSLEPNQEEVQSMKSETDSTIEVDSVTCELQ
DLQYEGRFSPTGFDASISSNSSNQQEPENKAKSHTNLAANQAVNVGDNNTKKLKRSHKSS
VLQKKRKTTTNTSDSEDLSGGESLTKMQSERSNVGLKSQPTKVPLRVHSPGKYAKTREKD
LFQKDYADRLPKVYKWSFQMSDLEKMTSMERIVFLQEKLQELRKHYLSLKSEVASIDRRR
KRCKKKERESAVVSSSSSSPSSSSITAAVMLTLAEPTLSSSSQNAMPVECR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctctagatgagccaccttacttatctgtgggcacagatgtaagtgccaagtat
agaggtgctttctgtgaagccaagatcaagtcaacaaaaaggcttgtcaaagtaaaggca
acattcagacaggattcttcaactgtggaagtgccagatgatcatgttaagggaccccta
aaggttggtgctgtggttgaagtaagaaatccagatggaatttatcaagaggctgtaata
agtaaattaacagatgcaagctggtacacagttgtattcgatgatggagatgaaaagact
ttaaggcgatcatcgctatgtttaaaaggagaaaggcattttgcacaaagtgaaaccctt
gaccagcttccgctcaccaacccagaacattttggaactcctgttattggaaagaaaaca
aacagaggaagaagatctaatcaaattcatgaagaagaatcctcatcttcctccagtgct
gaggatgaaaatgaatgtgaaactagtgatgaattaataggaacagttgtttgtgtagat
gttggagacaaaaagaaagcaacatgggttccgacattagtagtttctccagactgctgt
gatgatatcactgtaaagaaagatttcgttctggtgcgctcatttaaagatggcaaattt
gcttctgttccacgaaaggaaattcgcaacattaatgagatttccacaaagcatgatatt
tttaagcaagctttagaccacgccctggaattctgtaaaagtaaaactattcctgctaat
tggataacggaagtaaaggaggggagttcaagcagtgaaactgaagatgacgaggaagag
aataaagatgatgatgataatgatagcactaatgaagcagaggaagaagtcgaaccgttt
ccaggagaaagggaaatttttattcaacagttatacaaatttatggaagatagaggaact
ccaattaacaagagacctgtacttggatacagaaatttaaatctttttaaattgttccga
cttgtccataaattgggaggatttaacaatatcgacagcggagcaatttggaagcaagtt
taccaagatctcggaattccaattcttaattcagcagctggatacaatgtcaagtgcgca
tacaggaagtatttgtatggcttcgaagaatactgcacttcagctagcatttcttttcac
atggaactgcctacaaaagttgcacagaaaatatgtaaagagtgtgttcatgaaaataaa
gtttctgtaaagcaagaatccgaatcgcagggggaaacttttaaagaagaatttgatgca
aaacatgaaaccattaataaagaagtgaatctaaatgaagttaaagattccacagttaaa
gaaattataggaacttcattatgtaatgaaagcaaagtgaaagaagttgaagaacatatt
gcagtaaatcaagagacgatacttgaggaattcacaccaaaaattgaagagacgaaaatt
actgacaaacaggaaaatgcagaagctgaaatcaagacggaagaagaaatagatgagaac
cagaacatggagattgagaatgaagacagcgcagagggagaagagtttgaaagctaccca
tcgggcatgaaagtccaagtgcggtacggacgagggaaaaatcaaaaattatatgaagct
agtgttaaagattctgatgttgaaggtggagaggtcctttacttggtgcattactgcgga
tggaatgtgagatatgatgaatggataaaggctgacaagattgtaaggccagcagataaa
agtgtaccaaaaataaagcacagaaagaaaattaagaataaattggaacacaacaaagac
aagccagaaagaggtgaatgctctcccaagcattgcaggcttttcccgagacctctgttt
caacctagggatctggaaaatgaatccacactagatgaccctgaaaacaagcactcaata
caaggtccacctacaatggttgaaataacatctattttaaatggacttcaagctgctgag
aattctgcagaggacagtgaaactgatcacagtagcctgaatatggacaaagaaggaaaa
gaatttgacatgaatcatattggctttgatataaatcaaagactggatgacaataaaagc
ttcccaagagcagagggaaattatactgctgatgatcctataatggaagtaatacctagg
tccccagtgaaaacaatagaaggttcttcagatgatacagactatgaagtgaaatctgta
agacaaagtaaatttataaagaatgatattgcgaagtcacaggataagcgtggtaaaaga
aaatacacagaaattgggaaggcaaggtcccatattggaaatgaagagtacttcaagtgc
aacaaaacaattggtagacttgatgcaggtagtatgacttcctcagatgatgaggaaaaa
tccaatccaaaacatgcattatcaaacaagtacaatggttttgacgacaaaagaaaatca
atgcgaacaggtttctatacaagtttctcagaatcaccagaaaaaaggataaagctttta
aataattcagaagaaagacttcgagccaaagaccgcaaagacgtttggtcaagtatccaa
ggccagtggcctaaaaaaactttaaaggaacttttttcagattctgatacagaaggtgcc
acatcaccatcagctaggaatctagatgacacttcctctgttcagcaaagtcatgagaac
attagaatgtcttcatctgaagtgtccaaaccagagaaagataatggactaaagcctgtt
gatgagagaactgctgaaatgggtgacaaaaaaattgactttcccagtagtggcagtaac
tctgtattgaacacacccccaacaaccccagaatcactttcaactttaagcgattgccaa
aaacaaccatcaaaaagtgatattctagattctttagaaccaaatcaggaagaagttcaa
agcatgaaaagtgaaactgatagtacaattgaagtagatagtgttacctgtgaacttcaa
gatctccagtacgaagggcggttttcaccaacaggatttgatgcaagtataagttctaat
agcagtaaccagcaagaaccagaaaataaagcgaaaagtcacaccaatctggcagctaat
caggctgttaatgtgggagacaataatacaaagaaacttaaaagaagccacaaatcttca
gtgcttcagaagaaaaggaaaacaacaaccaacacaagtgatagtgaagatctttctggt
ggtgaaagccttactaagatgcagtctgaaagatcgaatgttggtttaaaatcacagcct
accaaagttccactcagagtgcattctccaggaaaatatgccaagactagagaaaaagat
ttatttcagaaagattatgctgatcgccttcctaaagtttacaaatggagttttcaaatg
tcagaccttgagaaaatgacaagtatggaacgcattgtattcctccaggaaaaacttcaa
gaacttcgaaaacactacctttcattaaaatctgaggttgcttctatcgataggcggaga
aagcggtgtaaaaagaaggaaagagaaagtgcagttgtatcatcatcatcttcgtcgcca
tcctctagttccatcactgcagctgtcatgttaactttagctgaaccaacattgtcaagc
tcatcgcaaaatgcaatgccagtagagtgcaggtga
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