Xenopus laevis (African clawed frog): 108716816
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Entry
108716816 CDS
T01010
Symbol
col10a1.L
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
xla
Xenopus laevis (African clawed frog)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
108716816
NCBI-ProteinID:
XP_041418913
Xenbase:
XB-GENE-17344440
UniProt:
A0A1L8G918
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Position
5L:78366501..78376065
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AA seq
667 aa
AA seq
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MHLQTSIILFLVFPKFVYTSGYYPERHAKQSSMKGPPPFLPFNAKSQVIPVPEQGPTGPP
GPAGPRGLPGPPGPQGKPGYGVPGPQGAQGVPGPPGYSSIGKPGFPGIPGKQGEPGKPGE
KGDIGPIGLPGTRGQQGPPGISGPTGISAAGIPGSKGTVGPPGPRGIPGFKGEPGIPGIN
GLKGQNGYGIPGHPGERGLPGLAGPPGPQGLTGIGKPGINGLPGQPGKVGDQGLPGEQGP
QGLSGPQGPFGQPGLPGVGKPGSNGVPGMIGPQGPKGQPGLPGMPGPQGLPGFGKPGLSG
LKGHRGLDGAPGIPGLKGEQGSDGYPGPPGLPGQIGIQGIQGPRGTPGEAGLPGHKGDVG
PKGSAGIPGPNGERGMPGLDGKPGYPGESGLAGLKGHPGISGQKGEKGIVGPPGLPGIAG
PIGPRGETGYNGEQGPRGVTGIPGMRGPAGPPGIPGLPGQKGETGAPGIPGPAGIAVKGM
QGPMGHSGIPGQRGMNGEQGVPGPPGPPGEPGQVIMPHYMPDGYAKSGQVQSLREVQASA
FTAILTKAYPSVGIPIKFDRILYNKQNHYDSRTGIFTCRLPGLYYFSYHVQVKGTNLWVA
LYKNGNPIMYTYDEYKKGYLDQASGSAVMDLAENDQVWLQIPNAESNGLYSSDYIHSSFS
GFLFGLT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaaacaagcattattttgttcctggtctttccaaagtttgtatacacatca
ggctattatccagaaaggcatgcaaagcagtccagcatgaaagggccaccacctttcctt
ccatttaatgcaaaaagtcaagtcattccagtaccagagcaaggcccaacaggacccccg
gggcctgctggtccgagaggactgcctggacccccagggcctcaaggaaagccaggctat
ggagttcctgggccacaaggagcacaaggagtgccaggaccaccaggatattcatctatc
ggaaaaccaggatttccaggcataccaggaaagcaaggagaacctggaaaaccaggggaa
aagggggacattgggccaattggactccctggtacaagagggcagcagggaccaccagga
atctcaggtccgactggaatttctgcagctggaatcccaggttcaaagggaacagtgggg
ccaccagggccaagaggcattcctggattcaagggtgaacctggtattcctggcatcaat
ggactcaagggacaaaatggttatggcattccaggtcacccaggggaaagggggcttcct
gggttagcaggaccaccagggcctcaaggtcttactgggataggtaagcctgggataaat
gggcttccagggcagccaggaaaagtaggtgatcaaggcttgccaggtgaacaaggaccc
cagggtctttcaggtccccagggcccttttggacaacctggactaccaggagttggaaag
ccaggctcaaatggtgtccctggaatgattggcccacaagggcccaaaggacaaccagga
ctcccaggaatgccaggccctcaaggcttgccaggctttgggaaaccaggattgtcaggg
ttaaaggggcacagaggacttgacggagcacctggtatacctggattaaaaggtgaacag
ggttctgatggttatccagggccacccgggttaccaggccagataggaattcaaggtata
caaggacctagagggacaccaggagaagctggtctgcctggacataaaggtgatgttgga
ccaaaaggttctgcaggcattccaggacctaatggtgaaagaggtatgcctggattagat
ggaaaaccaggatatccaggtgaatcaggtcttgctggcctcaagggtcacccaggcata
tctggccaaaaaggagagaaaggcattgtggggcctcctggtctcccaggaattgctggt
cctatagggcctcgtggagaaacaggctacaatggtgaacaaggacctagaggagtcaca
ggcataccaggtatgagggggccagcagggcctccaggtataccaggtcttccaggtcaa
aagggggaaacaggggccccaggaataccaggcccagctggcattgcagtaaagggaatg
caaggaccaatgggccactctggaattccaggccaaagagggatgaatggggagcaaggt
gtacctgggccacctggtccaccaggtgagccaggccaggttataatgccacattacatg
ccagatggctatgcaaaatcaggtcaagttcagagtctaagagaggttcaggcatcggct
tttactgctattctaactaaagcatatccatcagtgggaatacccataaaatttgacaga
attctgtataacaaacaaaatcattatgactctagaactggaatatttacatgtcgatta
ccaggactttattatttttcctaccatgtacaagtcaaaggcacaaatctttgggttgca
ttatacaaaaatggcaatccaataatgtacacttatgatgaatataagaaaggatacctt
gaccaagcatcaggcagtgctgttatggacttagctgagaatgatcaagtatggcttcag
ataccaaatgcagaatccaatggtttatattcatccgactatatacattcatctttctca
ggatttttgttcggtttaacataa
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