Xenopus laevis (African clawed frog): 108717046
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Entry
108717046 CDS
T01010
Symbol
dhx36.L
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108717046 (dhx36.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108717046 (dhx36.L)
03012 Translation factors [BR:
xla03012
]
108717046 (dhx36.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108717046 (dhx36.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108717046 (dhx36.L)
Translation factors [BR:
xla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108717046 (dhx36.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NACHT
NPHP3_N
DUF5320
PhoH
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108717046
NCBI-ProteinID:
XP_018119265
Xenbase:
XB-GENE-17340028
UniProt:
A0A1L8GAK8
A0A974CVY5
LinkDB
All DBs
Position
5L:124883656..124925125
Genome browser
AA seq
1000 aa
AA seq
DB search
MSYEQRRGWGRGRGGRGRARGFSSQYESGSAENSGGREKPPPHLKGREIGLWYARRQGQK
SKEKERLERAVVKMDESREEHITQLLNSVQTQNNNERPRCSDESWWDSDSERNNIVPPKL
SQPTSPEEKDHGTWFRNNMVPPKLSQPASPEEKDQDWDSEYAAEENEAGTDLDQQLREEL
HEKRNNYKYLEMQKFREKLPSYSMKEMIIKMINSNQVTVISGETGCGKTTQVTQFILDDH
INRGKGSSCYVVCTQPRRISAISVAERVAAERGETCGRGNSTGYQIRLESQMPQKQGSIL
YCTTGIVIQWLQSDQLLANVSHIVIDEIHERNLQSDVLMAIVKDLLTFRSNLKVILMSAT
LNAEKFSQYFDNCPMLHIPGFTYPVKEYFLEDVIEMVRYMPKDSDRRPQWKKRFMQGRMV
CPEKEEKEELYRERWPDFVRKLQRRYSEGTIEALQLADDEKVDLDLIAELIRYIVLKGED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTEVFKRPPPGVRKIV
IATNIAETSITIDDVVHVIDGGKIKETHYDTQNNISTMTAEWVSHANAKQRKGRAGRVQP
GHCYHLYNSLRDSLLDDYQLPEIVRMPLEELCLQIKILKLGGIGSFMRKLMDTPSREAIC
LAINHLTELNALDKREELTPLGFHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKMADARRKELSRNSKSDHLTVLNAFEGWEDAKCRGGRAERDYCWENFLSS
NTLKMLSNMKGQFAEHLLSVGFVSSRNPNDPKSNINSNNEKLIKAVICAGLYPKVAKIRP
SLGKNRKMVKVYTKSDGKVNIHPKSVNVEETEFHYSWLVYHLKMRTTSIYLYDCTEVSPY
SLLFFGGDISIQKDKEQDTIAVDEWIVFQSPARIAHLVKDLKSELDVLLKEKIENPQPVD
WKETKSRDCAVLTAIIDLITTQENQEEKSFAAGYQGGYNR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaacagcggagaggatggggacgaggacgaggcggacggggcagagccagg
ggcttctcttcccagtacgaaagcggctctgcggagaattcgggaggtagagagaaaccg
ccgccgcatctgaaaggccgggagataggtttatggtatgcccggagacaaggccagaaa
agcaaagaaaaagagaggctggagagagccgttgtgaaaatggatgaatccagggaggag
cacattactcagctgctgaactctgtgcagacacagaataacaatgaaaggccaaggtgc
tctgatgaatcctggtgggattctgacagtgaacgaaacaacatcgttcctcctaaactg
agccagccaacatcacctgaagaaaaggatcatgggacttggtttagaaacaacatggtt
cctcctaaactgagccagccagcatcacctgaagaaaaggatcaagattgggattctgaa
tatgctgctgaggaaaatgaagcaggcacagatttggaccaacagcttagagaagagctg
catgaaaaaagaaacaattataaatatcttgaaatgcagaaatttcgtgagaagttgcct
tcctacagtatgaaggagatgataataaaaatgataaattcaaatcaagtgactgttatt
agtggagagactggctgtgggaagaccacacaagtaacacagtttatactggatgaccat
atcaacaggggaaaaggttcttcgtgctacgttgtatgtacacagccaaggaggattagt
gccatatcggtggcagagcgtgtggccgcagaaagaggagaaacttgcggaagaggaaac
agcacaggataccaaattcgccttgaaagtcagatgccacaaaaacaaggctctatatta
tattgcacaactgggattgtgatacagtggctccaatcagaccagctcttggccaatgtc
agccatattgttatagacgaaatacatgagaggaaccttcaatctgatgttctcatggca
attgttaaagatcttctaacgtttcggtcaaatttgaaagtcattttgatgagtgctact
ttgaatgcagagaagttttcacagtattttgataattgcccaatgctgcacattcctggg
tttacttaccctgttaaagagtacttccttgaagatgttatagaaatggttcggtacatg
ccaaaggatagtgacaggaggccccagtggaagaaacggtttatgcaagggcgtatggtt
tgtccagagaaagaggaaaaggaggagctctacagggagcgttggcctgattttgtacgg
aaacttcagagaaggtactctgaaggtaccattgaagctttgcaacttgcagatgatgaa
aaagttgaccttgaccttattgcagaactcatacggtacattgttctgaagggggaggat
ggtgcaatcttggtttttctgccaggatgggacaacattagcaccttacatgatctgctc
atgtcacaagttatgtttaaatcagataaatttattattattcctttgcattcattgatg
cccactgtaaaccagacagaggtttttaaaaggccaccaccaggagtgagaaaaattgta
attgccaccaacattgcagagacaagtattactatagatgacgtggtacatgtaatagat
ggaggaaaaataaaagagacccactacgatacacaaaataacatcagtacaatgactgca
gaatgggttagccatgccaatgccaagcaaaggaaaggccgtgcaggcagagttcaacct
gggcactgctaccacctgtataacagccttcgggatagtcttttggatgactatcaatta
ccagaaattgtaaggatgccattggaggaactttgcctccagatcaagattttaaagctt
ggtggcattggctcttttatgaggaaattaatggataccccatctagagaggcaatatgt
ctggcaattaatcatcttacagaactgaatgctctagataaacgtgaagaattaacccct
ttgggttttcacttggcacgattaccagtagaaccacacattggcaagatgatcctgttt
ggagctctcttttgttgtctagatccagttctcaccattgcagcaagcctcagttttaaa
gatccctttgtcattcctttgggaaaagagaaaatggctgatgcaagacggaaggaattg
tccaggaattcaaaaagtgaccatctaacagtgttgaatgcgtttgagggctgggaagat
gccaaatgtcgtggtggcagagcagagagagactattgctgggaaaactttctgtcttct
aacacattaaagatgttgagtaacatgaaaggacagtttgctgaacacctgcttagtgta
ggatttgtgagcagcagaaatccaaacgaccctaaatcaaatatcaattcaaacaacgag
aagctcattaaagctgtcatttgcgctggtttatatccgaaggtagcaaagattcggcca
agtctcggcaaaaatcggaaaatggtaaaggtgtatacaaaatccgatggcaaggttaac
attcacccaaagtctgtcaatgtggaagagacagaatttcactattcatggcttgtctac
catctgaagatgagaactacaagtatttatctatatgattgcacagaagtctcaccatat
tcactgcttttctttgggggagacatttcaatccagaaagacaaagagcaggatactatt
gccgtggatgaatggattgtgtttcagtcccctgcaaggattgcacatctagtgaaggat
ttgaagtcagaacttgatgtcctattaaaagagaagattgagaatcctcagcctgttgac
tggaaggaaacaaaatccagagactgcgctgtcctaactgccatcatcgatctcataaca
acacaagaaaaccaagaagaaaaaagctttgctgctggttaccaggggggatataatagg
tga
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