Xenopus laevis (African clawed frog): 108717085
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Entry
108717085 CDS
T01010
Name
(RefSeq) WD repeat and FYVE domain-containing protein 1-like
KO
K23299
WD repeat and FYVE domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108717085
Membrane trafficking [BR:
xla04131
]
Autophagy
Other autophagy associated proteins
Others
108717085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
FYVE
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
WD_LRWD1
Nucleoporin_N
WD40_MABP1-WDR62_1st
Barwin
Motif
Other DBs
NCBI-GeneID:
108717085
NCBI-ProteinID:
XP_018119331
UniProt:
A0A8J0VHN3
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Position
5L:complement(134480687..134510140)
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AA seq
409 aa
AA seq
DB search
MAAEIRSRSPRGPVLLTKIPGHREQVAAASLIPREDGVITASEDRTLRVWLKRDSGQYWP
SIYHTMSSPCTALRYHHESRKIFVGQDTGAIVEFLMSEDFNKMNFIKTYPAHQNRVTEII
YSPGTQWVISTGHDKCLTWMCTESGAQMGRHSFASWASCLQYDEDTKYAFVGDFSGQINL
LKLEQNSCSVISTLKGHEGSISCLYWDPAQRYLFSGSSDHSIILWDIGGRQGRTLILQGH
HDKVQGLTYIHLTRQLVSCSADGGICVWNMDIDREEAPQWLESDSCQKCSQPFFWNIKQM
WDAKTVGLRQHHCRKCGQAVCGKCSSKRSSYPIMGFEFQVRVCDSCYETIKDEDRTSLAT
FHEGKHNICFMTMDVSRGLMVTSGTDRIVKIWDMTPSVGCSLATGFSPR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagatccgttcccggtctccgcgcggtcccgttctccttactaagattccc
gggcacagggaacaggtggctgcggcgagtttgattcctcgggaggatggagttatcacg
gccagcgaggacaggactctgcgagtatggctcaagagagacagcggacagtactggcca
agcatctatcacacaatgtcatctccctgcacagctctgaggtaccatcacgagagcagg
aagatttttgtgggccaagatactggtgctatagtggaattccttatgtctgaagacttc
aacaaaatgaattttataaagacgtacccagcgcatcagaaccgggtgaccgaaatcatc
tactctccggggacccagtgggtgatcagtacagggcatgataaatgcctcacatggatg
tgcactgagagcggggcacaaatgggcagacacagctttgcatcctgggcttcctgccta
cagtatgacgaagatacaaaatatgcctttgtgggagatttctctggccagatcaatctg
ctcaagttggagcagaacagctgttctgtgatatcaacacttaaggggcatgaaggaagc
atttcctgtctgtactgggatccagcccaacgatacctattttctggatcctcggatcac
agcattatcctgtgggacattggagggcgacaaggaaggacactgatcctccaaggacac
catgataaagtacaggggctgacttacatacatctgacacggcagctggtctcctgctca
gcggatggcggcatctgtgtctggaatatggatattgatagagaagaggcacctcagtgg
ctagagagcgactcctgccagaaatgttcccagccgttcttctggaatataaagcagatg
tgggatgcaaagacagtggggttgcgtcagcaccactgcaggaagtgtggtcaggctgtg
tgtggaaaatgcagctctaagagatccagctaccctattatgggatttgagtttcaggtg
cgggtctgcgattcctgttatgagaccatcaaagatgaggaccgaacgtcactggccact
tttcatgaagggaagcacaacatctgtttcatgactatggatgtatctagagggctgatg
gtgaccagtgggactgaccgcattgtaaagatctgggacatgactccatcagttggctgc
agcttggccactggcttctctcctcgttga
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