KEGG   Xenopus laevis (African clawed frog): 108717192
Entry
108717192         CDS       T01010                                 
Name
(RefSeq) flap endonuclease GEN homolog 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    108717192
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108717192
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N Chromo_SEND1
Other DBs
NCBI-GeneID: 108717192
NCBI-ProteinID: XP_041419500
UniProt: A0A8J1KQA5
LinkDB
Position
5L:153144596..153178171
AA seq 1055 aa
MGVTDLWSILGPVRKHVPLESLAGKTLAVDLSIWVCEAQMVKQMIGVVHKPHLRNLFFRI
SSLSLLGVKLVFVSEGEAPKLKAETMSKRNEMRYGPSATAAPPKAGRSYFKSVLKECLLM
LECLGIPWVQAAGEAEAMCAYLNAHGYVDGCITNDGDVFLYGAQTVYRNFTMNVKDPHVD
CYEVSKIKAHLGLDREELVGLAILLGCDYLPKGVPGVRKVQALKLIEMLKGESLLQRFYL
WEKDCNVRGTTKAPKKKTHCSVCCHPGSAKDHERNGCKMCESDRFCEPHDYDYRCPCDWH
KDQREKVENSAEFNIRRKAQRLEGFPFHPVIDEFLINKNKLVKVLKWRRPGLLCFQNFAA
ERMDWPRHYSCEKLLVLLTYYDMNERKAGREHKSQLQAIRIVKTRIRNGSPCFEIEWVKP
DGYVFADDHPAESPLLTIEEESLFRAAYPLVVALFHKEKQEAEENKLKCKKSKPKSKAVD
ELDDVASLLSELSLKPVTEKQTSLELKEDGGDSGNVHEKPARNCNFLGFFSDVDSAAVKG
TVLDTKPDCEVYPSPTTDSDPSHALCSSPAPSNPQHLTAASPNISALISDLQLSSIDWDS
TSFSQSPQAHTKDSREVEDPVEFSYKPTTSNLGTSEKKSDEVGNKIARPGTLIEQNKAQL
TSKQYEVEDFHKLPLKERVLLKNAVQCGVPYPATKQSKPVPSVHVKPVPLVHVKPVHLKH
VPPVHVKPVHVKPAQSVETKPVLSVDLKPVPSVDVKPVPSVDVKPVPSVDVKPVPSVDVK
PVPSVDVKPVPSVDVKPVPSVEVKPVLSVDAKHVPSVHVKPVPRVHVKPVPSVHVKPVPL
SLHNQGLTDNNSITTSLDLHFKEQVHPKLLIKVSRDPSQQENRPPPVPALKPMVCSSAKP
QIQGGTGTKTYNFVKNVKAVSLVPVNVGKKVGPLAAYKSLGKKSVCQKGTLFDQEDQPEM
QATCPSTYVHPLSKGVKGDKLHRPPYGGNEVKQNKENSPSSNNLICVFLSPDSKVVTKRA
SDCSTEESDGDDSIISVDSPLPLAERLKLRLLQQC
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgggagttaccgatttgtggtccattctggggccggtgagaaagcacgtgcccttggag
agccttgctgggaaaacgctggctgtcgatctgagcatctgggtgtgtgaagcacaaatg
gtgaagcagatgattggagtagtccacaaaccccatctcaggaatctgttcttccgcata
tcatcgctgagtctgttgggggtgaagctggtctttgtttcggagggtgaagccccaaag
cttaaagctgaaaccatgagcaagaggaatgagatgcgctacgggccttctgccactgct
gctccacccaaagcaggaaggtcctatttcaagtctgttttgaaggagtgtctgctgatg
ctcgagtgtttggggatcccgtgggttcaagcagccggtgaagcagaagcgatgtgtgcc
tacctgaatgcccacggctatgtggacggatgcattacaaacgacggcgatgttttcctc
tatggggcccagacggtttaccggaatttcactatgaatgtgaaggacccccatgtggat
tgctatgaagtatccaagattaaagcccaccttgggttggacagagaagaactagtaggc
ttggccatcctcctgggttgtgattatctccccaaaggggtgcctggagtccgaaaagta
caggccttgaagctgatcgagatgctgaagggagagagtttgctgcaaaggttctatctg
tgggagaaggactgtaatgttcggggcaccacgaaagcccctaagaagaaaactcactgt
tctgtttgctgccacccaggttcagccaaagatcacgagcgcaacggctgtaagatgtgc
gagagcgaccggttctgtgaaccacatgactacgattatcgttgcccctgtgactggcat
aaggatcagcgagagaaggtagaaaattcagcggagttcaatatcaggaggaaagcacag
cgccttgaaggtttcccattccacccggtcattgatgaatttctcataaataagaataag
cttgtgaaagtgcttaaatggaggagacccggccttctgtgttttcagaattttgcggct
gagcgaatggattggcccaggcattattcatgtgagaaactgctggtgttgttgacgtac
tacgacatgaatgagaggaaggctggccgagagcacaagtctcagctacaggctatacgc
attgtaaagacaagaatcaggaatggaagtccttgctttgaaattgaatgggtgaaacca
gacggttatgtttttgccgatgatcatcctgccgagtctcctttgctgacgatagaggaa
gaatctctcttccgagccgcctaccccctcgtagtagccctgtttcataaggagaagcaa
gaggccgaggagaataaactgaaatgcaagaaaagcaagcccaaatccaaagctgtcgat
gagctagatgatgtggcgtctctgttgtccgaactgagcctgaaacctgttacggaaaag
cagacttcactggagttgaaggaagatggaggagactcgggcaatgtacacgagaagcca
gcaagaaattgcaactttctaggcttcttcagcgatgtggattctgcagcggtgaaagga
actgtattggacacaaaaccagattgtgaggtgtacccatcacccactacagacagtgat
ccttcccatgccttgtgttcttctccggcaccaagcaatccccaacatctcaccgctgct
tctcccaacatttctgccttgatttcagatctccagctcagcagtatcgattgggactcg
acatcttttagccagtctccccaagcacacactaaagacagcagagaggtagaagatccg
gtagagtttagttacaaaccaaccaccagcaacttgggaacttcagaaaagaaatctgac
gaggtgggcaataaaattgcccggcctggaacccttattgagcaaaataaggcacagttg
acttcaaagcaatacgaagtggaagactttcacaagttacctttaaaagagagagtcctt
ctaaagaatgctgttcagtgtggtgtcccttatccagcaacaaagcaatctaagcctgtt
ccgtctgttcatgtaaagcctgttccactcgttcatgtaaagcctgttcacttaaaacat
gttccgcctgttcatgtaaagcctgttcatgtaaaacctgctcagtcggttgaaacaaag
cctgttctgtctgttgacttaaagcctgttccgtctgttgacgtaaagcctgttccgtct
gttgacgtaaagcctgttccgtctgttgacgtaaagcctgttccgtctgttgacgtaaag
cctgttccgtctgttgacgtaaagcctgttccgtctgttgacgttaagcccgttccgtct
gttgaagtaaagcccgttctgtctgttgacgcaaagcatgttccatctgttcacgtaaag
cctgttccacgtgttcatgtaaagcctgttccgtctgttcatgtaaagcctgtcccgctt
agtctccataaccaagggcttactgataacaactccataacaacctcattggatttacat
tttaaggaacaagtccacccaaagcttctaattaaagtatctagagatccaagtcaacaa
gagaacagaccaccaccagttccagccttgaagccgatggtctgctccagcgctaagcct
cagattcagggaggtactgggacaaaaacatacaattttgtaaagaatgtaaaggcagtg
tcgcttgtccctgtgaatgttggtaaaaaagtggggcccctggcagcttataaatccttg
gggaagaagagtgtctgtcagaaagggaccttatttgatcaggaagatcaacctgagatg
caggcaacatgcccaagcacctatgttcatcctttatccaagggggttaaaggggataaa
ttgcataggccgccgtatgggggcaatgaagtgaaacagaacaaagagaattcgccttca
agcaataatctcatttgtgttttccttagccctgactctaaggtagtcaccaaaagagca
agtgactgttccacagaagagagcgatggagacgactctattatatctgtagacagcccc
ttgccactggctgaacgtttaaagctaagattattacagcaatgctaa

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