Xenopus laevis (African clawed frog): 108717192
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Entry
108717192 CDS
T01010
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
108717192
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108717192
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
108717192
NCBI-ProteinID:
XP_041419500
UniProt:
A0A8J1KQA5
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Position
5L:153144596..153178171
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AA seq
1055 aa
AA seq
DB search
MGVTDLWSILGPVRKHVPLESLAGKTLAVDLSIWVCEAQMVKQMIGVVHKPHLRNLFFRI
SSLSLLGVKLVFVSEGEAPKLKAETMSKRNEMRYGPSATAAPPKAGRSYFKSVLKECLLM
LECLGIPWVQAAGEAEAMCAYLNAHGYVDGCITNDGDVFLYGAQTVYRNFTMNVKDPHVD
CYEVSKIKAHLGLDREELVGLAILLGCDYLPKGVPGVRKVQALKLIEMLKGESLLQRFYL
WEKDCNVRGTTKAPKKKTHCSVCCHPGSAKDHERNGCKMCESDRFCEPHDYDYRCPCDWH
KDQREKVENSAEFNIRRKAQRLEGFPFHPVIDEFLINKNKLVKVLKWRRPGLLCFQNFAA
ERMDWPRHYSCEKLLVLLTYYDMNERKAGREHKSQLQAIRIVKTRIRNGSPCFEIEWVKP
DGYVFADDHPAESPLLTIEEESLFRAAYPLVVALFHKEKQEAEENKLKCKKSKPKSKAVD
ELDDVASLLSELSLKPVTEKQTSLELKEDGGDSGNVHEKPARNCNFLGFFSDVDSAAVKG
TVLDTKPDCEVYPSPTTDSDPSHALCSSPAPSNPQHLTAASPNISALISDLQLSSIDWDS
TSFSQSPQAHTKDSREVEDPVEFSYKPTTSNLGTSEKKSDEVGNKIARPGTLIEQNKAQL
TSKQYEVEDFHKLPLKERVLLKNAVQCGVPYPATKQSKPVPSVHVKPVPLVHVKPVHLKH
VPPVHVKPVHVKPAQSVETKPVLSVDLKPVPSVDVKPVPSVDVKPVPSVDVKPVPSVDVK
PVPSVDVKPVPSVDVKPVPSVEVKPVLSVDAKHVPSVHVKPVPRVHVKPVPSVHVKPVPL
SLHNQGLTDNNSITTSLDLHFKEQVHPKLLIKVSRDPSQQENRPPPVPALKPMVCSSAKP
QIQGGTGTKTYNFVKNVKAVSLVPVNVGKKVGPLAAYKSLGKKSVCQKGTLFDQEDQPEM
QATCPSTYVHPLSKGVKGDKLHRPPYGGNEVKQNKENSPSSNNLICVFLSPDSKVVTKRA
SDCSTEESDGDDSIISVDSPLPLAERLKLRLLQQC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggagttaccgatttgtggtccattctggggccggtgagaaagcacgtgcccttggag
agccttgctgggaaaacgctggctgtcgatctgagcatctgggtgtgtgaagcacaaatg
gtgaagcagatgattggagtagtccacaaaccccatctcaggaatctgttcttccgcata
tcatcgctgagtctgttgggggtgaagctggtctttgtttcggagggtgaagccccaaag
cttaaagctgaaaccatgagcaagaggaatgagatgcgctacgggccttctgccactgct
gctccacccaaagcaggaaggtcctatttcaagtctgttttgaaggagtgtctgctgatg
ctcgagtgtttggggatcccgtgggttcaagcagccggtgaagcagaagcgatgtgtgcc
tacctgaatgcccacggctatgtggacggatgcattacaaacgacggcgatgttttcctc
tatggggcccagacggtttaccggaatttcactatgaatgtgaaggacccccatgtggat
tgctatgaagtatccaagattaaagcccaccttgggttggacagagaagaactagtaggc
ttggccatcctcctgggttgtgattatctccccaaaggggtgcctggagtccgaaaagta
caggccttgaagctgatcgagatgctgaagggagagagtttgctgcaaaggttctatctg
tgggagaaggactgtaatgttcggggcaccacgaaagcccctaagaagaaaactcactgt
tctgtttgctgccacccaggttcagccaaagatcacgagcgcaacggctgtaagatgtgc
gagagcgaccggttctgtgaaccacatgactacgattatcgttgcccctgtgactggcat
aaggatcagcgagagaaggtagaaaattcagcggagttcaatatcaggaggaaagcacag
cgccttgaaggtttcccattccacccggtcattgatgaatttctcataaataagaataag
cttgtgaaagtgcttaaatggaggagacccggccttctgtgttttcagaattttgcggct
gagcgaatggattggcccaggcattattcatgtgagaaactgctggtgttgttgacgtac
tacgacatgaatgagaggaaggctggccgagagcacaagtctcagctacaggctatacgc
attgtaaagacaagaatcaggaatggaagtccttgctttgaaattgaatgggtgaaacca
gacggttatgtttttgccgatgatcatcctgccgagtctcctttgctgacgatagaggaa
gaatctctcttccgagccgcctaccccctcgtagtagccctgtttcataaggagaagcaa
gaggccgaggagaataaactgaaatgcaagaaaagcaagcccaaatccaaagctgtcgat
gagctagatgatgtggcgtctctgttgtccgaactgagcctgaaacctgttacggaaaag
cagacttcactggagttgaaggaagatggaggagactcgggcaatgtacacgagaagcca
gcaagaaattgcaactttctaggcttcttcagcgatgtggattctgcagcggtgaaagga
actgtattggacacaaaaccagattgtgaggtgtacccatcacccactacagacagtgat
ccttcccatgccttgtgttcttctccggcaccaagcaatccccaacatctcaccgctgct
tctcccaacatttctgccttgatttcagatctccagctcagcagtatcgattgggactcg
acatcttttagccagtctccccaagcacacactaaagacagcagagaggtagaagatccg
gtagagtttagttacaaaccaaccaccagcaacttgggaacttcagaaaagaaatctgac
gaggtgggcaataaaattgcccggcctggaacccttattgagcaaaataaggcacagttg
acttcaaagcaatacgaagtggaagactttcacaagttacctttaaaagagagagtcctt
ctaaagaatgctgttcagtgtggtgtcccttatccagcaacaaagcaatctaagcctgtt
ccgtctgttcatgtaaagcctgttccactcgttcatgtaaagcctgttcacttaaaacat
gttccgcctgttcatgtaaagcctgttcatgtaaaacctgctcagtcggttgaaacaaag
cctgttctgtctgttgacttaaagcctgttccgtctgttgacgtaaagcctgttccgtct
gttgacgtaaagcctgttccgtctgttgacgtaaagcctgttccgtctgttgacgtaaag
cctgttccgtctgttgacgtaaagcctgttccgtctgttgacgttaagcccgttccgtct
gttgaagtaaagcccgttctgtctgttgacgcaaagcatgttccatctgttcacgtaaag
cctgttccacgtgttcatgtaaagcctgttccgtctgttcatgtaaagcctgtcccgctt
agtctccataaccaagggcttactgataacaactccataacaacctcattggatttacat
tttaaggaacaagtccacccaaagcttctaattaaagtatctagagatccaagtcaacaa
gagaacagaccaccaccagttccagccttgaagccgatggtctgctccagcgctaagcct
cagattcagggaggtactgggacaaaaacatacaattttgtaaagaatgtaaaggcagtg
tcgcttgtccctgtgaatgttggtaaaaaagtggggcccctggcagcttataaatccttg
gggaagaagagtgtctgtcagaaagggaccttatttgatcaggaagatcaacctgagatg
caggcaacatgcccaagcacctatgttcatcctttatccaagggggttaaaggggataaa
ttgcataggccgccgtatgggggcaatgaagtgaaacagaacaaagagaattcgccttca
agcaataatctcatttgtgttttccttagccctgactctaaggtagtcaccaaaagagca
agtgactgttccacagaagagagcgatggagacgactctattatatctgtagacagcccc
ttgccactggctgaacgtttaaagctaagattattacagcaatgctaa
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