Xenopus laevis (African clawed frog): 108717339
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Entry
108717339 CDS
T01010
Symbol
dmxl1.L
Name
(RefSeq) dmX-like protein 1 isoform X4
KO
K24155
rabconnectin-3a
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108717339 (dmxl1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108717339 (dmxl1.L)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108717339 (dmxl1.L)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
108717339 (dmxl1.L)
RAVE complex
108717339 (dmxl1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR19_2nd
CdiI_N
Gp_dh_N
Motif
Other DBs
NCBI-GeneID:
108717339
NCBI-ProteinID:
XP_018119742
Xenbase:
XB-GENE-6487177
UniProt:
A0A974I5K6
A0A1L8I1H4
LinkDB
All DBs
Position
1L:complement(185373259..185459765)
Genome browser
AA seq
3028 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSFHEQSITAYASGCDIVILGSDFERLQVIPGVQHGNILV
GCVDCSMQQARIAASYGNVICIFEPVSLLQQKTSHSNSVRTQWQKSGQIVLNSVVHNLTW
DPTGTRLLTGSTQLQLWTNVSLEKSSCDDRQERTTTDYAEWNCIWQCKTAFSVHLMKFSP
DGEFFATAGKDDCLVKLWYNTESWHSAVTSPVTSPDKQGQGEVDFSFIYLAHPRAVNGFS
WRKTSKYMPRGSVCNVLLTCCKDNVCRLWAETLLPNDSLLSGEGFNLMIEPDGVNNNFKR
NSSSKERVQSALESNLKHFRRGRSRSLALVAHTGYHPHQQNAHNVHRNTPFHGNALCHFH
IAASINPATDIPLLPSITSMSLNETEEKSGPFVVHWLNNKELHFSLSMEVFLQQLRKNLE
QQSSEISTDETNLAEENSDEETDEFGAGEKFSSDKREANSDKTALNSPLIQLPSSVIDHE
IEILLSEWNKNADMLFSIHPVDGSLLVWHVDWLDEYQPGMFRQVQVSFSCRIPVAFPTGD
ANSLCRSIVMYASTKNVDLAILQGKQKPSGMARSTSMLISSGQSKSSNNLKLSIFTPNVL
MISKHADGSLNQWQVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHH
NSLQSPEQNQSSNCSEEGCSLSDHNTTPETCQDSSEVYSELILWRVDPVGPLSFSGGVSE
LARLNSLHISAFSNVAWLPTLIPSHCLGAYCNSPSACFVASDGQNLRLYQAVIDAKKLLC
ELSNPDISKYVGEVFNIISQQSTARPGCIIELDAITGLHGRKTQLLHVFQEDYILGNNKK
NVAFGNSGFTTDSEEISSKESTENSQNGYSEKFYLVVIESTPERRSNLQMWKLHLKSVPV
SIEDKSDSDSSGNAQAIDDSFSSASGERVQSPHTQRYQTCKANLQSTSKMTLSSEIVYSE
ELDLPDGVEIISVKPSAGHLSSSSIYPVCHAPYLLATSCSDSKVRFWRCRVDSDLPLSPS
DMETSINYIWEEWPLLVEGGLQNGAVSVPGRPIEVSCAHTNCLAVAFKQTPSKSSNSSQE
FLMHVSIFECESTGGSCWILEQTIHLDELSTMVGSGISIDNNLVAYNKLDVFLSSNKQLH
PNTKHLVHLDWMSREDGSHILTIGIGSKLLMYGQVAKKAQEQPFKEDFALQLWQTAKNPA
HPRFVLLRCVDLVSSVEGSLPLPVSLSWVRDGILVVGMDCEMHVYSQWQPFSKQDAASTD
SYNGSTPSITNLVKQSQSVASGLNPPKKSMTRSMTSLAQKLMGKRTAFDLPIEMEDSGLF
EAAHALFPTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINDNEPSYERRLR
SLSISASGSTSRDPKTFSKPDNVDYTEIDSIPPLPLYALLAADEESTFTSTVEKSSNHNN
SNKSSNGNANDENYDELFQVPTLGSDDLTAMDSEDETTKPQVIDLSQYSHTYFGPEHSQV
LSRHLLHSSLPGLTRMEQMSLMALADTISTTSTDIGESRDRSQGGETLDECGLKFYLAVR
LHTFLTTSVPPAYRAQLSHQGLSTSHFAWAFHSVAEEELLGTLPAMQKGDPTWAELRAMG
VGWWLRNTHNLRKCIEKVAKAAFQRNNDPLDAAIYYLAMKKKAVIWGLYRSQKEAKMTQF
FGNNFNEERWRKAALKNAFSLLGKQRFEHSAAFFLLAGSLKDAVEVCLEKLHDIQLALVI
SRLYETEFEKTSTYKSVLKRRVLGMEPHSKEPIVSNVHPDPFIRSMAYWILEDYSQALET
LLKQLVRDEEDEACSLSSSCDPSVFNFYNFLRTHPMLLRRHFGSSESSSTKMRITVENGL
ADKINLGERRLFFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPLLRTSSLADASKVTTP
LSEIKEAGTSSIDWTNSLVNGSLSSFDMSSDKQGNSSLLFDWSQPSMDVEDEPLDLKWDS
DTEDEESGLSMKDVKSTQSTESTKPGTTGTSYSESLSIDENDILCPSDDVLAAQLKFRAC
LKILTGELRTLSTGYEVDGGKLRYQLYSWLERTVVALQQICDYNGNLEEFTSGAAAELSR
EDSSENSLDQSATKHQRENCQRRQWLLKFQSLLRMFLSFCVLHGSHGGGLASVRMELILL
LQESQQDTAILSSSQAEQTSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIINLDSPP
HPDVHNHKIYVMHSLAASLSACIYQCLCGGQANSSSVQTNPFTGMAYQSVLLIHRQPLRT
TSLDEAVIPNTSPTQWPGISALLRLLNSAGEEAQPGLTILLCEILTAVYLSLFIHGLVTH
SSHELFCIVAHPLINKMWSAVFGGGARIPSRGQLPVKPVIVSSPLDDGDRPSKRFRISTK
IQPKENANHLDSPVVDQGSSIFREKYIPPELSIWDYFIAKPFPPLTQNKLEYDSDESQGS
DDDEEDDDDVSLSDVQLQEHSNPNSYSWALMRLAMVQLVLYNLKSFYPLAGHELSELPVN
SPLCHAIMKTLQRWEQVLLRRLEIYDGPPPDFINIPVLEESVSAGPAILRHKAMLEPTNT
PFKSKHSSTLPVKRLWQYLVKQECIQETFIRNIFTKKRSPAETEADTGYTGGRARIIHKE
SDIITAFAVNKANRNCIAIASSHDIQELDVSAILATQIYSWIDDEFETENKGAEDFLVVH
TRDDLSAVQGTTPYTHSNPGTPINMPWLGGVQTGRGASVMIKKPINNVRRMASHPTLPYY
LTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRIRFNHQGNKFGILDADGYISMYQTNWK
YSAATGTPPKPYLTWQCHNKTANDFVFISSSSLIATAGQSNDNRNICLWDTLVAPANSLI
HAFMCHDSGATVIAYAPKQQLLISGGRKGFTSLFDLRQRVQKHHFQSHDSAVKAIAVDTT
EEYFITGSAEGNIKVWSLTTLNLMHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCGA
DGTVKMRILPDRFSTLNDLLKTDVKVVL
NT seq
9087 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacaggagccgtcaacccgggggataactgcttctcggtg
gggagctttcacgagcagtcaatcacggcatatgcatctgggtgtgatattgtcattttg
ggaagcgattttgaaagattacaagttattccaggagttcagcatggaaatattttggtg
ggatgtgtggattgttccatgcagcaagcaaggattgcagcttcatatggcaatgtgatt
tgcatctttgaaccagtcagtcttttgcaacaaaagacttcacattcaaatagtgttcga
actcagtggcagaagagtggacagattgtgctcaactctgttgtccataatttgacatgg
gacccaaccggtactcgtcttctaactggttctacccaacttcagctttggaccaatgtt
agtttagaaaagtcatcttgtgatgaccgtcaagagaggaccaccactgactatgctgag
tggaattgtatctggcagtgcaaaactgcattttctgttcatttaatgaagttttcccca
gatggagaattttttgccactgctggaaaggatgactgtctggtgaaattgtggtataat
actgaaagctggcattctgctgttacatctccagttacaagtccagacaagcaaggccaa
ggtgaagtagatttctcttttatctaccttgcccatcctcgcgctgtaaatggattctca
tggagaaagacaagtaaatacatgccaagaggctctgtttgcaatgttcttctgacctgc
tgcaaggacaacgtatgccgcttgtgggctgaaaccctcttgcccaatgacagcctttta
tctggcgagggcttcaatttaatgatagagcctgatggtgtaaataataactttaaaaga
aactcttccagtaaagaacgtgtacagagtgcattggagtcaaatttaaagcatttcagg
agaggcaggagtcggtctttggcactcgtggctcacactgggtatcatcctcatcagcaa
aatgcacataatgtccatcggaacactcccttccatggcaatgctctatgccactttcat
atagctgccagcatcaatccagccacagacatccctctcctgccttccatcacttctatg
agtcttaatgagacggaagagaaaagtggaccttttgtcgtacactggctaaataataag
gagctgcatttttctttgtcaatggaagtctttcttcagcagctcagaaaaaacttagag
cagcaatcatcagaaatcagcactgatgaaaccaaccttgctgaggagaactccgatgaa
gagacagatgaatttggagctggtgaaaaattctccagtgacaaaagagaagcaaatagc
gacaaaacagctttgaattcaccattgatacaattaccctcatctgttattgatcatgaa
atcgaaattctgctttccgaatggaataagaacgcagatatgcttttcagtatccatcct
gtggatggttctttgcttgtctggcatgttgattggttggatgaatatcaacctggaatg
tttcgtcaagtacaggtgtctttttcttgtagaattcctgtagcattccctactggagat
gcaaactcgctgtgcagaagtattgtgatgtacgccagcacaaaaaatgtagacctggcc
atcctgcagggcaaacagaaaccctcaggcatggcacgttctacatctatgctaatttct
tcaggccaaagtaaatcctctaacaatttgaaactaagcattttcacgccaaatgttttg
atgatatcaaaacatgctgatgggtccctgaaccaatggcaagtcagctttgctgaggaa
tctgctttttcgactgttctcagcatttctcacaaatctcgttactgcggacatcgtttt
catctcaatgatctagcttgtcattctgtgttgccactactgctcacaacctctcatcac
aattccttgcaatcaccggagcaaaaccagtcatccaactgctcagaagaaggctgttct
ctaagtgatcataacaccacaccagaaacttgccaagattccagtgaagtgtacagtgaa
ctcatcctctggagggtggaccctgttgggcctttgtctttttctggtggagtttctgaa
ctagctcgccttaactctcttcatatttctgctttttccaatgtggcctggttgccaaca
ctcatacctagtcattgtttaggtgcatattgcaattctccaagtgcttgttttgttgcg
agcgatggacagaacttaaggctgtatcaagctgtgatcgatgctaaaaaacttttgtgt
gaactgtccaacccagatatttctaaatacgttggagaagtgttcaacatcattagtcaa
caatcaactgctagaccaggatgcatcatagaattagatgcaattactggcctacatggc
agaaaaactcagctgcttcatgtctttcaagaggattatattttaggaaataataagaaa
aacgtcgcttttggaaacagtggctttactacagattctgaagaaatctccagcaaggag
tcaacagaaaactcacaaaatggatactctgaaaaattctacctggtagtaattgagtcg
accccagaaagacgatcaaatctgcaaatgtggaaactgcaccttaaatctgtgccagtg
tctatagaagataaatcggattccgactcttctggaaatgctcaggcaatagatgattca
ttcagttctgcttctggagaaagagtccaatcacctcacacacaaagatatcagacctgc
aaagcaaaccttcagagtacaagcaagatgaccctttcatctgaaattgtttatagcgaa
gaattagacttaccagatggagtagaaataatcagtgttaaaccatcagcaggtcatttg
agttcttcttcaatttatccagtatgtcatgctccttacttactagcaacatcttgctct
gatagcaaagtgaggttctggcgctgcagagtggattcggatttgcccctgtcaccaagt
gacatggaaaccagtattaattatatatgggaagaatggcctttgcttgttgaaggtggc
ctccagaatggtgcagtgagtgtaccagggagacctattgaagtcagctgtgcccataca
aattgtctagctgtagcattcaagcaaaccccaagtaaaagtagcaactcgtcacaagaa
tttttaatgcatgtaagtatttttgaatgtgaatctactggaggttcatgctggatacta
gaacaaacgattcatctggatgagctaagtacaatggttggatctggcattagtatcgat
aataatcttgtagcttacaataagcttgacgtttttttgtcttctaacaagcagctccat
ccaaacacaaagcatttggtccacttagactggatgtcaagggaggacgggtctcatata
ttaactataggtataggttcaaaacttctaatgtatggccaggttgcaaaaaaggcacaa
gaacaaccttttaaagaagattttgccttacaactctggcaaactgcaaaaaacccagct
catccaagatttgtacttttgagatgcgtggacctggtgtcttctgtggaaggatcgctt
ccgctgcctgtttctttgtcctgggtacgtgatggaattcttgttgttggaatggactgt
gaaatgcatgtctactcccagtggcagcctttctcaaagcaggatgccgcgagcacagac
tcttataatggcagcactccatctattacaaacttagtcaagcaaagccagtctgttgca
tctggtcttaaccctccaaagaaatctatgactaggtcaatgacaagtttagcacagaag
cttatgggaaagagaactgcatttgaccttcccatagaaatggaagattccggccttttt
gaagccgctcatgctttgttcccaacattacctcagtatcatcctttgcagcttttagag
ctgatggatctaggtaaagtgcgtagagcaaaggctattctatcacatctcgtaaaatgt
attgctggagaagtggtagctattaatgacaatgaacctagttatgaacgcagattacgt
tctctttcaataagtgctagtggaagcacttctcgagatcctaaaacatttagcaaacca
gataatgtagactatacagaaatagattctattccgccactgcccctgtatgcactcctt
gcggcagatgaggagtcaacatttacatccacggttgagaagtccagcaaccataacaac
tctaacaaaagcagcaacggtaatgctaacgatgaaaattatgatgaactttttcaagtt
cccactctgggctctgatgatttgacagcaatggattctgaggatgaaactacaaagcca
caagttattgacctttcccagtatagtcacacttattttggtccagaacattctcaggtc
ctctcaagacatttacttcactccagtcttccaggcctgactcgcatggaacagatgtcc
ctaatggctcttgcagataccatttctacaacaagtactgatattggagaaagtagagac
cgcagtcaaggtggggagacccttgacgaatgtgggttgaagttttatctggctgttcga
cttcatacatttctcactacatctgttcctcctgcatatagggctcagctttctcaccaa
ggcttgtccacaagtcactttgcctgggcctttcattctgtggcagaggaagaattgctg
ggcacacttcctgccatgcaaaaaggagaccctacctgggcagaactgagagcgatggga
gtgggatggtggcttaggaacacccataacttgcgcaagtgtattgaaaaggtagccaaa
gcagcttttcagagaaataatgaccccttagatgcagccatatactatcttgcaatgaag
aagaaagctgtaatatgggggttatacagatcccagaaagaggcaaagatgacccagttt
tttggaaacaattttaatgaagagaggtggaggaaagctgctctgaaaaatgctttctca
ctgctcggcaaacagcgttttgaacattctgctgcttttttccttttagctggctcctta
aaagatgctgttgaggtgtgccttgaaaaactgcatgatatccagttagcgctagtgata
tccaggctttatgagactgaattcgaaaaaacgtcaacatataaatctgttctaaaaagg
agagttttagggatggagccccatagcaaagaacccattgtttcaaacgtgcatcctgat
ccgttcatacgaagtatggcctactggatcttggaggattatagtcaagcactggaaacc
ttgctaaaacagctagtgagagatgaagaagatgaagcatgtagcctgtcatctagttgt
gatccatcggttttcaatttctacaatttcctacggactcatcccatgctattaagaaga
cattttggctcctccgaatcctcctctaccaaaatgcggattactgtggaaaatggctta
gctgacaaaattaatttaggggagagaagattgttttttacaactgcccatgctcattta
aaagctggctgcccgatgcttgccttggaagtattatccaaaatgcccaaggtagtaaag
aaatcgaaaccattacttcgtacatcaagtttagcagatgcaagcaaggttacaacacca
ttgtcagagataaaagaagctggaaccagttccattgattggacaaactctttggtcaat
ggatcattgtcatcttttgacatgtcatccgataagcaagggaactcttctcttttattt
gactggagccagccatcaatggatgttgaagatgaacctctggacttaaagtgggacagt
gacacagaagatgaggaatctggcttgtcaatgaaagacgttaaatccacacaaagcaca
gagagtacaaagcccgggacaactggcacaagctactccgagtccttaagcattgacgaa
aatgatatactttgtccttctgatgatgttttagctgcacaattaaaatttagagcatgc
ctaaagattcttactggagaactgcgtactttgtccacaggctatgaagtggatggtggg
aagctgagataccagttgtacagctggcttgaaaggacagttgttgctctgcaacagata
tgtgattacaatggtaatttagaggagtttacttcaggggcagctgctgaactttcccgt
gaagacagttcagagaattctctggatcagagcgctacaaagcaccaaagagagaattgt
cagcgacgacagtggcttctgaagtttcagtccctgctaagaatgtttttaagtttttgt
gtcttacatggctctcatggtgggggattggcttctgtacgtatggaactgatattgctt
ctacaagagtcccagcaggatactgccatcctttccagctcacaggcagaacagacctca
atccctcttctgtttgcctgcactgctagtgccaaaactgttgtggctaatcctttgctg
catctcagcaatttaacccatgacatcctgcatgccataatcaatcttgattctcctcca
catccagatgttcataatcacaagatctacgtaatgcattctctggctgcttcactttct
gcctgtatctatcagtgtctttgtggaggccaagccaacagttcttctgtgcaaacaaat
ccgttcacaggaatggcgtatcagagtgtattacttatacataggcagcctttgagaaca
acaagcttagatgaagcagtgattccaaatacatcccccactcagtggccaggaataagc
gccttgctacgcctgctaaattctgcaggggaagaggcccaaccagggcttactattttg
ttgtgtgaaattctcacagcagtttatttgagcctgtttatccatggactagttacacat
tctagccatgagttattttgcattgtggcccatcctttgatcaacaagatgtggtctgca
gtcttcggaggtggagcccggatcccaagcaggggacaattgcctgttaaaccagttata
gtatcctctccattggatgatggtgacagaccatcgaagcgcttcagaatttctacaaaa
attcagccaaaggagaatgcaaatcatcttgactcacctgtagttgatcaagggtcatcc
atttttcgggaaaaatatatccctcctgagcttagtatctgggattattttatagcaaag
ccctttccacctctgacacaaaataaacttgaatatgattcggatgagagtcaaggaagt
gatgatgatgaagaagatgatgatgatgtgtcgttatcagatgttcagctccaagagcat
tccaatccaaattcttatagctgggctttaatgcgacttgcaatggtgcagcttgtactc
tacaacttaaagagtttttaccccttggctggtcatgaactttcagagctgcctgtaaat
tctcccctttgccatgccatcatgaagactttacagagatgggagcaagtattgttgaga
cgacttgaaatatacgatggacctccaccagattttatcaacatacccgtcttggaagag
tctgtgtcagcaggccctgctatattacggcacaaggcaatgctggagccaactaacacc
cctttcaagtcaaagcattcaagcacattacctgtaaagagactttggcaatacttggta
aaacaagagtgcatccaagaaacctttataagaaacatatttacaaaaaaaagatcaccc
gctgagactgaagcggatactggctacaccgggggcagggcaagaataatccacaaagag
tccgacattatcacagcctttgccgttaataaggctaacagaaactgcattgcaatagct
tcaagccatgacatacaggagctggacgtgtctgcaatcttggccacccagatttattcc
tggattgatgatgagtttgaaactgaaaataaaggggctgaggattttctggttgtacat
acccgtgatgacttatcagcagtgcagggtacaaccccctatacccacagtaatcctggt
actcccattaatatgccatggcttgggggagttcagactggaaggggagcatctgtgatg
ataaagaagcctattaataatgtcagaaggatggcatctcacccaaccctaccttactat
ctaaccggtgctcaggatggcagtgtgagaatgtttgaatggggccattctcagcagata
acttgcttccgatctggtggaaactccagagtgactcgcatacgattcaatcaccagggg
aataagtttggaattcttgatgctgatggatatatcagcatgtatcagacgaactggaaa
tacagtgcagctactgggaccccacctaaaccgtacttgacatggcagtgccataacaag
actgccaacgactttgttttcatcagttcctcatctttaatagcaactgcaggacagtca
aatgataatagaaacatctgcctgtgggatacattggtggcacctgcaaatagtttaatt
catgcattcatgtgccatgatagtggggctactgtaattgcctacgccccaaaacagcag
ctgttaatatctgggggaagaaaaggatttaccagtctgtttgacctccgacaaagagta
cagaaacatcactttcagagccacgattctgctgttaaagcgattgccgttgatacaaca
gaggaatactttattaccggatcagccgagggcaacattaaggtgtggagtctgacgact
ttaaatttgatgcacactttcataaatgagcacgctcgccagtctatcttcaggaacatc
ggaactggagtgatgcaaatagagactggaccagccaatcacatcttctcttgtggagca
gacggcacagtcaaaatgagaatattgccagatcgtttcagcacccttaatgacctcctc
aaaactgatgtaaaagttgtgctttaa
DBGET
integrated database retrieval system
