Xenopus laevis (African clawed frog): 108717621
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Entry
108717621 CDS
T01010
Symbol
otx1.S
Name
(RefSeq) homeobox protein OTX1 B isoform X2
KO
K09326
homeobox protein OTX1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108717621 (otx1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108717621 (otx1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
108717621
NCBI-ProteinID:
XP_018120322
Xenbase:
XB-GENE-17337096
UniProt:
A0A1L8G0R4
LinkDB
All DBs
Position
5S:1407979..1424073
Genome browser
AA seq
327 aa
AA seq
DB search
MMSYLKQPPYSINGLGLTRPAMDLLHPPVGYPVTPRKQRRERTTFTRSQLDVLETLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSNNSNSGSGGKSRVGKKKCSP
TRESSGSESSGQFTPPTVSGSSSSSSSSNSSGNPSQTSASLNITSSAIWSPTSISPGTAP
GSGPDPLGAGSGSCMQRSGSSSAASNYPVSYSQAAGYTQGYPAPSSSYFTGVDCSSYLTP
IHSHPHQLSPITPSSMSGPHNHHHHHLSQTSNLHHHHQSYTSSAFNSSSSDRLDYKDQST
PSSWKLNFNSTDCLDYKDQASWRFQVL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccctatagtatcaatggattggggctcacgagacct
gctatggacttgctgcacccgccggtgggatacccagtgaccccgcggaagcagcgcaga
gagcgcaccacgttcacccgttcgcagctggatgtgctggagactctgttcgccaagacc
cgttacccggacattttcatgcgggaagaagtggccctaaagatcaacctgccggagtcc
cgagtacaggtttggtttaagaacagacgagccaagtgtcggcagcagcagcagagcagt
aacaacagtaacagcgggtccggggggaagagccgagtgggtaagaagaagtgcagtccc
accagggagagttccggctcagagagcagcgggcagttcactccccccacggtgtccggc
tcttcatcctcttcttccagttccaactcatcagggaatcccagtcagacgtcagcctcg
ctgaatatcacaagctccgccatctggagccccacctccatctctcctggcaccgcccct
ggctctgggcctgaccccctgggagcaggaagtggctcgtgcatgcaacgctcaggctcc
tcctctgcagcctctaattaccctgtgtcctacagtcaggccgccggctacacccaggga
taccccgccccttcttcctcctacttcactggagtggattgtagctcttacctgacccct
attcactcccaccctcaccagctcagccccatcaccccttcctccatgtctggtccccac
aatcatcatcatcatcacctgagccagacctccaaccttcatcatcatcaccagtcctac
accagctccgcctttaactcctcctcctctgaccgtctggactataaggaccaatccact
ccctcctcctggaaactcaactttaattccaccgactgcctcgactacaaagatcaggcc
tcatggaggttccaggtcttgtga
DBGET
integrated database retrieval system
