KEGG   Xenopus laevis (African clawed frog): 108717623
Entry
108717623         CDS       T01010                                 
Symbol
rab1a.S
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108717623 (rab1a.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108717623 (rab1a.S)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    108717623 (rab1a.S)
   04031 GTP-binding proteins [BR:xla04031]
    108717623 (rab1a.S)
Membrane trafficking [BR:xla04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    108717623 (rab1a.S)
 Autophagy
  Other autophagy associated proteins
    108717623 (rab1a.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108717623 (rab1a.S)
  Exosomal proteins of other body fluids (saliva and urine)
   108717623 (rab1a.S)
  Exosomal proteins of colorectal cancer cells
   108717623 (rab1a.S)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    108717623 (rab1a.S)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA ABC_tran AAA_7 PduV-EutP AAA_16 LANC_like AAA_29 Septin AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 108717623
NCBI-ProteinID: XP_018120327
Xenbase: XB-GENE-17344267
UniProt: Q7ZXF7 A0A974HIW3
LinkDB
Position
5S:complement(1901989..1928877)
AA seq 204 aa
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
TAGGQEKNVKIQSTPVKQSSGGCC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtccagcatgaatcccgagtatgactatttattcaaattacttttgattggagactcc
ggcgtgggaaagtcttgtcttctgctcaggtttgcagatgacacatacacagaaagttac
atcagtacaattggtgttgactttaaaatcaggactatagaattagatggaaaaacaatc
aaacttcaaatttgggacaccgccggccaggaaagatttcgaactattacatcaagttac
tacaggggagcccatggcatcattgttgtgtatgatgtaacagaccaggaatcatttaac
aatgtaaagcagtggcttcaggaaatcgatcgttatgccagtgaaaacgttaacaagtta
ttggtaggcaacaagtgtgatctaaccacaaagaaggttgtggactacacaacagcaaag
gagtttgcagactctctgggaattccgtttttggaaacaagcgcaaagaatgcgacaaac
gtagagcaggctttcatgacgatggcagcggagatcaaaaagcgaatgggacctggcgcc
acagcaggagggcaagagaagaacgtgaagatccagagcactccagtcaagcagtctagt
ggggggtgctgctaa

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