Xenopus laevis (African clawed frog): 108717628
Help
Entry
108717628 CDS
T01010
Symbol
jag1.S
Name
(RefSeq) protein jagged-1 isoform X1
KO
K06052
jagged-1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
xla04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108717628 (jag1.S)
04371 Apelin signaling pathway
108717628 (jag1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xla04090
]
108717628 (jag1.S)
CD molecules [BR:
xla04090
]
Proteins
108717628 (jag1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
CD34_antigen
EGF_3
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
108717628
NCBI-ProteinID:
XP_018120334
Xenbase:
XB-GENE-17337675
UniProt:
A0A974HGR0
A0A1L8G0P5
LinkDB
All DBs
Position
5S:5811484..5882068
Genome browser
AA seq
1206 aa
AA seq
DB search
MLFPRRLLIALLCLRLKVSIASGQFELEILSMQNPNGELQSGNCCDGQRNPTDRKCSRDE
CDTYFKVCLKEYQSRVSAGGACSFGTGYTPVIGGNSFNLKYSRNHERNRIVLPFSFAWPR
SYTLVVEAWDYNNDTNDPGDLIDKALHSGMINPSRQWQTLKQNAGMTHFDYQIRVICDEH
YYGFGCNKFCRPREDFFGHYTCDQNGNKTCLEGWMGPECNKAICHQGCSTKHGTCKTPGE
CRCQYGWQGQYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQLCDKDLNYCGTYQPCLNGG
TCSNTGPDKYQCSCSEGYSGQNCEIAEHACLSDPCHNGGSCLETSVGFECECAGGWTGPT
CSINIDECSPNPCGYGGTCQDLVDGFKCICPSQWTGKTCQIDANECEAKPCVNANSCRNL
IGSYYCNCLPGWTGQNCDTNINDCLGQCQNGGTCRDLVNGFRCICSPGYAGERCEKDVNE
CASNPCLNGGHCQDEINGFQCLCPAGFSGNLCQLDIDYCEPDPCQNGAQCFNLATDYFCN
CSEDYEGKNCSHLKDHCRTTPCEVIDSCTVAVASNNTPEGVRYISSNVCGPHGKCRSQSG
GKFTCECKKGFTGTYCHENINDCESNPCENGGTCIDGVNSYKCICSDGWEGMYCETNIND
CSKNLCYNGGTCRDLVNDFYCECKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGDTFKCI
CTAGWEGATCNIARNSSCLPNPCFNGGTCVVRGDSFTCVCKEGWEGPTCSHNTNDCSPHP
CYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCMDEINGFRCTCPAGR
SGPRCQEVTGRPCITNGHMMPDGEKWDDDCNSCQCLNGKVTCSKVWCGPQRCNIHGTSEC
PAGQTCVPVRDNHCFVPPCTGVGECWPTNQPPVKTKCNSSSQDSSCANITFTFNKEMMSP
GLTTESICNELRNLNVLKNVSAEYSIYITCELSPSANNELHVAISVEENRDGRNPIKDVT
ERIIDLVSKRDANNTFIASVAEVRVQRQRDNNGADFLVPLLSSIVTVAWICCLVTAFYWC
IRKRRKQSSRSHTASEDNTTNNVREQLNQIKNPIEKRGAAPSKDYENKNSKIAKIRTHNS
EVEEDDTDKHQQKSRYVKQPAYSLVDRDEKPPNSAAPATKQPNWTNKQDNRDLETAQSLS
RMEYIV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcccaaggagactcctcattgctctgctctgtctgcgcctaaaggtgtccata
gcatcaggccagttcgagttggaaatcttatcgatgcagaatcccaacggagagttgcag
agtgggaattgctgcgacggccagcgcaacccaacggatagaaaatgctccagggacgaa
tgcgacacttactttaaagtttgcctaaaggagtaccagtccagggtatcggcagggggg
gcctgcagcttcggcactggatataccccggttattgggggcaattccttcaacctgaaa
tacagccggaatcacgagaggaacaggattgtgttgcctttcagttttgcttggccgagg
tcttacacgttggttgttgaagcgtgggattacaataatgacactaatgaccccggtgat
ctcatagacaaagccctccattctgggatgattaacccaagtcggcaatggcaaaccctg
aagcagaacgccggcatgacgcatttcgattaccagattcgggtcatttgcgacgagcat
tattacggtttcggctgcaacaagttttgtcgcccgcgggaggacttttttggacactac
acgtgtgatcagaacggcaacaagacctgtttggaaggctggatggggcctgaatgtaac
aaagcaatatgtcatcaaggctgcagcacaaaacacggtacttgcaagacgccaggagag
tgcagatgtcaatatggatggcaagggcagtactgcgacaaatgcattcctcacccggga
tgtgtccatggcacttgcaatgaaccgtggcagtgtctgtgtgaaaccaactggggcggt
cagctgtgtgacaaagatctcaattactgcggtacttaccagccgtgtctcaatggaggc
acctgcagcaacaccggccctgacaaataccagtgttcctgctctgaaggctactcggga
caaaattgtgaaattgccgaacatgcctgtctctctgatccctgccacaatgggggaagt
tgcttggaaacatctgtgggctttgaatgtgaatgtgctggaggctggacgggccccaca
tgcagcatcaatatcgacgagtgctctcccaatccgtgtggctacggtgggacgtgtcag
gacttggtcgatggctttaaatgcatttgtccttctcaatggacgggaaaaacatgccaa
attgatgccaacgagtgtgaagccaaaccctgcgtgaatgccaactcctgcagaaacctg
atcggtagctattattgcaattgccttcctggatggacgggacagaattgtgacacgaat
attaatgattgccttggccagtgtcagaacggcggaacctgcagggacttggttaatggg
tttcgctgtatctgttctcccggctatgcaggggaacgctgtgagaaagacgtgaatgaa
tgtgcgagcaatccgtgcctgaatgggggccactgtcaggatgaaatcaatggattccaa
tgtctgtgtcccgccggtttctcaggaaacctctgtcagttggacatagattactgcgag
ccggacccctgccagaatggagcccagtgctttaatttggctacagattacttctgcaac
tgctccgaagactacgaggggaagaattgttcgcacttaaaagatcattgtcgcacgact
ccctgcgaagtgattgacagctgtacagtggcagtcgcttccaacaacacccctgaaggg
gtgcggtacatttcatccaatgtctgtggcccccatggaaaatgcaggagtcagtccgga
gggaaattcacctgcgagtgcaagaagggtttcactggcacctactgtcatgagaatatc
aatgactgcgagagtaacccgtgtgaaaatggaggtacctgcattgatggtgtgaactca
tacaaatgtatttgtagcgacggatgggaaggcatgtactgcgaaacaaacattaatgac
tgcagtaaaaacctttgctacaatggagggacttgtcgggacttggttaatgatttctac
tgcgaatgtaaaaacggctggaaaggaaaaacctgccactcccgagacagtcagtgtgat
gaagccacgtgtaacaatggcggcacctgctacgacgagggagatacatttaaatgcatt
tgcaccgctggatgggaaggagccacgtgtaatattgccaggaacagtagctgtttgcca
aatccctgctttaacggtggaacttgcgtcgtccgtggcgattctttcacttgtgtttgc
aaagaaggttgggaaggaccaacatgctcccacaatacgaacgactgcagccctcaccca
tgctataacagtggaacttgtgttgatggagacaactggtaccggtgtgaatgtgctcct
ggatttgctggtcccgactgtcggataaatatcaatgagtgccagtcttctccctgtgct
ttcggagcgacttgtatggatgaaatcaatggattccgttgcacttgcccggcgggtcgt
agtggtccaaggtgccaagaagttacaggaaggccgtgtataactaatgggcatatgatg
ccagacggggaaaagtgggacgatgactgcaactcctgccagtgtctgaatggcaaagtt
acctgctcaaaggtgtggtgtggccctcagcggtgcaacatacatggaactagtgaatgt
cctgctggacagacgtgtgttccagttagagacaaccattgctttgttcctccttgcacc
ggggtgggggaatgttggccaaccaatcagccgcctgtaaagaccaagtgtaactccagc
tctcaggattccagttgtgccaacatcacatttacctttaacaaggagatgatgtcaccg
ggactcaccaccgagagcatttgcaatgaactgaggaatcttaacgttttgaagaatgtt
tccgccgaatattccatctacatcacctgtgaactgtcgccttctgcaaacaacgagctc
catgtggccatatccgtggaggaaaacagagacggcaggaatccaatcaaagacgtcacc
gagcgaatcatcgatcttgtcagcaagcgagacgccaacaacaccttcatcgcttcagtg
gcagaagtcagagtccagaggcagcgcgacaataacggcgcagatttcctggttccatta
ctgagctccattgtaaccgtggcctggatctgctgcctggtaaccgctttttattggtgc
atccggaagcgcagaaagcaaagcagccgttctcacaccgcgtccgaagacaacaccacc
aacaacgtccgggagcagctcaaccagatcaaaaaccccatcgagaaacgcggcgccgcc
cccagcaaagactacgaaaacaaaaattccaaaattgcaaaaataaggactcacaattca
gaagtggaggaggacgacacggacaagcaccagcaaaagagcagatacgtcaagcagccg
gcgtattcgctggtcgaccgagacgagaagccgcccaacagcgctgctccggcgacaaaa
cagccgaactggacaaataaacaggacaacagagacttagagacagcgcagagcctcagc
cgcatggaatacatcgtatag
DBGET
integrated database retrieval system
