Xenopus laevis (African clawed frog): 108717640
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Entry
108717640 CDS
T01010
Symbol
srf.S
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108717640 (srf.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108717640 (srf.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
108717640 (srf.S)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
108717640
NCBI-ProteinID:
XP_018120351
Xenbase:
XB-GENE-17343286
UniProt:
A0A974CQ04
A0A1L8G0Z2
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Position
5S:6731331..6746557
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AA seq
449 aa
AA seq
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MLPSNQAGLAGSGRGLGLARRAGNGAGCPGVRGPGVQYSGSSGSSDSGEEEDPPGRGVKR
VLNELELPEQGGAAAGGGGYPGASGIVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKR
KTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS
PPRSDPCTDQRMSATGFEETDLTYQVSESDSSGETKDSLKPAFTLTNLPGTSNIQTVPNT
STSMQVSSGHSFPITNYLAPVSSANGTVLKTEGGAMSSGGLMQIPTGFTLMSAGGAVAQQ
LPVHSIQVHSAAQASPSSDSSSELVQTSSSGTVTLPAAIMTSSVPTTVSGHMMYSSPHAV
MYAPTQGLTDGGLAVLNAFSSAPPMQLSHTQEQGGVQQVFLTAPSGTVQIPVSAVQLHQM
TVIGQQSSSSNLTELQVVNLDTSNSSKND
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagtaaccaggccgggttggcggggtcaggccgtgggctggggttggcccgc
agggcaggaaatggggctgggtgcccaggagttaggggccccggggtccaatacagcggt
agttcagggagctcagattcaggggaagaggaagatccccctgggcgaggggtaaagcgg
gtactcaatgagctggagctgccagaacaagggggagcagcagcaggaggtgggggttac
ccaggggccagtggaatagtgtcaggggccaaacctggaaagaaaactcgcggccgagtg
aagattaagatggaattcattgacaacaaattgcggcgctacacaaccttcagcaagcgc
aaaactggcatcatgaagaaggcctatgagctttccaccctgactggcacccaggtgctg
ctgttggttgccagtgagaccggtcatgtgtacacatttgccacacgtaaattgcagccc
atgatcaccagcgagacgggaaaagctctgattcaaacttgcctgaattcacctgactct
cctccccgctcggacccatgtactgaccagcgcatgagtgccactggcttcgaggagact
gacctcacctaccaggtgtctgagtctgacagcagtggggaaaccaaggattctctaaag
ccagcattcaccttgaccaaccttccaggcacatccaatatccaaactgtgcccaacacc
tccacttccatgcaggtcagcagcgggcactcatttcccatcaccaactacctggcacca
gtctccagcgccaatggaaccgtgctgaaaacagagggtggcgctatgagctcgggggga
ttaatgcagattcccaccggcttcactcttatgtcagccgggggagctgtagctcagcag
ttacctgtccattctattcaggtccattctgcagcgcaggcatcaccgtccagtgacagt
agttcagaactggttcaaacatcttctagtggaacagtaacactgcctgctgccatcatg
acttcctccgtgcccacaactgtgagtggtcacatgatgtactccagtccccatgcagtc
atgtatgcccctacacaaggactaacagatggaggcctcgctgtgctcaatgccttctcc
tccgcgccccccatgcagctctctcacacccaggaacaggggggtgtccagcaagttttt
ctcactgctccctccggaactgtccagattcccgtgtcggcagtacagctccaccagatg
acggttattgggcagcagtccagcagcagtaacctgactgagctgcaagtggttaatttg
gacacatcgaacagcagcaagaacgactga
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