Xenopus laevis (African clawed frog): 108717836
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Entry
108717836 CDS
T01010
Symbol
stxbp5.S
Name
(RefSeq) syntaxin-binding protein 5 isoform X3
KO
K08518
syntaxin-binding protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108717836 (stxbp5.S)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108717836 (stxbp5.S)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
108717836 (stxbp5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_Vps41
Synaptobrevin
WD40_like
Beta-prop_NWD2_C
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
108717836
NCBI-ProteinID:
XP_018120706
Xenbase:
XB-GENE-6489271
UniProt:
A0A1L8G222
A0A974CT70
LinkDB
All DBs
Position
5S:complement(40361816..40566285)
Genome browser
AA seq
1152 aa
AA seq
DB search
MKKFNPIRKVLDGLTAVSYSSSSSSSSSCQPGIRDLEITETLQSEHFQLCKTVRHGFPYQ
PSALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALTD
DTLHLWNLRQKRPAILHSLKFSRERITFCHLPFQSKWLYVGTERGNIHIVNVESFSLSGY
VIMWNKAIELSSKSHPGPVVHISDNPIDEGKLLIGYESGIVVLWDLKSKKADYRYTYDEA
IHSVAWHHEGKQFICSHSDGTLTIWNVRSPAKCIQTIVPHGKQIKDGKKPEPCKPILKVE
YKTTRYGDPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDF
QEPYAVVVLLEKDLVVIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSV
GAKQKRQGYSKKEWPISGGNWGVGTQSYPEIIITGHADGSIKFWDASAITMQVLYKLKTA
KVFEKSRNKDDKPSTDIVDEDPYAIQMISWCPESRVLCVAGVSAHIIIYRFSKQEVTTEV
ISMLEVRLLYEINDLESPDIEQVPTPSGGPNSQPIVFQSHPSTSSSSSDGIRDNVPCLRV
KSTALKQSAGYQVELVTQLVWVSGEPPQQITSLAINSAYGLVVFGNCNGIAIVDYIQKAV
LLNLSTVELYGSNDPYQRQPRSPRKTRQPSGAGLSDINESTVASEDRCKSPTSGCTSNSS
DDEQTKSKFIEKVKIKGRRLSKAIVTDIAKMSRKLSLPTELKPELVPFLDVRDNSFSRSR
SSSVTSIDKESRETISSLHFCDTFTRKPDVSTSPCLWVGTTLGTVLVIVLNLPPGGEQRL
LQPVIVSPSGTVLRLKGAILRMAFHDTLAALIPAASESWKEPNVPEDKDDKDRLKKRRPV
SVSPSSSQEISENQYAVICSEKQAKVISLPSQNCIYKHNITETSFVLRGDIVSMTNSTCL
ACFCANGHIMTFSLPSLRPLLDVNYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRITYS
QDTCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGESASGKPPRSLAQ
HIPGPGGIEGVKGAASGVVGELARARWALDERGQKIGELEERTTAMLTSADSFSKHAHEM
MLKYKDKKWYQF
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaaccccatcaggaaggtgctggatggcctgacggccgtttcctactcc
tcttcttcatcttcttcttcttcatgccagcccgggatcagagatctagagattacagag
accctccagtccgagcacttccagctgtgcaagactgtccgccatggattcccttatcag
ccatcagccttggcatttgatccagtgcagaagatccttgcaatagggactcagactggt
gctctgaggctattcggtcggccaggagttgaatgctattgtcagcatgacagtggagct
gcagtaatacagcttcagttcctgattaatgagggagctctagtgagtgccttgacggat
gacactttacatttatggaacctgcgacagaagagacctgctatactgcattccctaaaa
tttagtagagaaaggataacattttgccacctgcctttccagagcaaatggctctacgtg
ggaacagaacgaggcaatattcatattgtcaacgtggagtcgttctctctctcaggctac
gtcatcatgtggaataaagccattgaactgtcatccaaatcacatccaggaccagttgtc
cacatcagtgataatccaattgatgaagggaagctcctgattggttatgaatctggaata
gtagtattatgggacctcaagtcgaaaaaagcagactacagatacacctatgatgaggct
attcattctgttgcttggcaccatgaaggaaagcagtttatctgcagccattcagatgga
actttaaccatatggaatgtacgctctcctgccaagtgcatacagacaatcgtgccgcat
ggtaaacagataaaagatggaaaaaagccagaaccctgcaagcctatcctgaaagttgaa
tataaaacaacacgatacggggatccttttatcatcctttcgggtggcttatcatatgat
actgttggaagaagaccttgcttaactgtaatgcatgggaaaagcactgctgtcctggaa
atggattatcctattgtagatttcctaaccctctgtgaaactccctatccaaatgatttc
caggaaccatatgctgttgttgtacttctagaaaaagatttagttgttatagatcttgca
caaaatggatatcctatatttgaaaacccatatcccctgagtatacacgagtctcctgtc
acatgctgcgagtactttgctgactgccctgtggaccttatccctgcactttactcagtt
ggggccaagcaaaagcgacaaggttacagtaaaaaggaatggcccatcagtggtggtaat
tggggtgttggcacgcaaagttatcctgaaataattatcacaggccatgcagatggttca
atcaaattttgggatgcttcagcaataacgatgcaagttctgtacaagttgaagacagca
aaggtttttgagaaatctcgaaacaaagacgacaagccaagcacagacattgtagatgaa
gacccgtatgccatacagatgatctcctggtgcccagagagcagggtgctttgtgtggcg
ggagtttcagcacacatcatcatttacagattcagcaaacaggaagttacaacagaggtc
atctcgatgcttgaagttcggttgctctatgaaattaatgatttagagtcccctgatatt
gaacaagtgccaacacccagtggaggacccaactcccaacctattgtttttcaatcacat
ccatccacaagcagcagttcttctgatgggattcgagacaacgttccctgtttaagagta
aaaagcactgctttaaagcaatctgctggttatcaagtggaactagttacacagcttgtg
tgggtcagcggagaacctccacagcaaataaccagtctggctattaactctgcttacggg
ttagttgtttttggcaactgcaatggtattgcaatcgttgactacatccagaaggctgtg
ctcttgaacctcagcaccgttgaattatatggctcaaatgatccctatcagagacagcca
cgatctccacgcaaaacacgacaaccctcaggagcgggcctttctgacattaatgaaagc
acggtggcatcagaggatcgctgtaaatcccctacttcaggttgcacgtccaattcttct
gatgacgaacaaacaaagagtaaatttatagaaaaggtgaagatcaaaggcagaaggtta
tccaaagcgatagtcactgatatagcaaagatgtcaagaaagctaagcctacctacagag
ttaaagcctgaattagtgccgtttctagatgttagagacaattccttcagtcggtccagg
agctccagtgtgacaagcattgacaaggaatcacgggaaacaatatcatctctgcacttt
tgtgatacattcaccagaaaacctgacgtgtcaacatccccatgtttgtgggttggaaca
acgctgggtactgtgttagtcattgtattaaacctaccaccggggggtgagcagagactt
ctacagcctgtaattgtgtctccaagcggaaccgtactgaggttaaagggtgcaatctta
cgaatggcatttcatgacacactcgcagctttaattccagcagcatctgaatcctggaag
gaacccaacgtacctgaagataaggatgataaggatcgattgaaaaaacgaaggccagtg
tctgtctcaccctcctcctctcaggaaatcagtgaaaaccaatatgcagtgatatgttct
gaaaagcaagcaaaggtgatctctttgccctcccaaaactgcatttataaacacaacata
acagagacttcttttgttctacgaggagatatagtgtcaatgactaatagcacctgcctt
gcatgtttctgtgccaatggacatattatgacgtttagtttgccaagtttaaggccgctg
ttggatgtaaattacttgccactgaccaacatgcggatagcccgaacattctgcttcaca
aacaatggacaggcattgtatctcgtctcacccacagaaatccagagaattacctatagt
caagacacctgcgagaacttacaggaaatgttaggagagcttttcaccccagttgaaacg
ccagaagctcctaacagagggttcttcaaaggcttatttggtggaggggcacagtcactt
gacagagaggatctttttggagagagtgcatctgggaaaccaccaagaagcctagcccag
cacatccctgggcctggtggaattgagggagtcaaaggagctgcatcaggagttgttgga
gaactagctcgtgcccggtgggccttggatgaaagagggcagaaaataggggagctggag
gaaagaacaaccgctatgcttaccagtgcagactccttttcaaaacatgctcatgagatg
atgttaaagtataaagataagaagtggtatcagttctga
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integrated database retrieval system
