Xenopus laevis (African clawed frog): 108717843
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Entry
108717843 CDS
T01010
Symbol
ermard.S
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein isoform X1
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108717843 (ermard.S)
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Gene cluster
GFIT
Motif
Pfam:
DUF4209
Motif
Other DBs
NCBI-GeneID:
108717843
NCBI-ProteinID:
XP_018120724
Xenbase:
XB-GENE-6488156
UniProt:
A0A974CSL7
A0A1L8G235
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Position
5S:41946770..41968858
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AA seq
671 aa
AA seq
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MLEPSTVSTCLSPAVHYMICKVGFELQGSYDIRRILTIDNEVCWEALSENMCYKATGEFL
DFIQSIRQLGPLCQAVHTHFTSLSSTEFEEQFGWCFHWTENTELFLRAFKALKSLSGVNI
SLSMMKVTSCLERSLGDVYLMVGKECPFLLRDLLASTELAAILSKPVMDVLKVFLGSPES
LNLRNILWHGFASPDDIPAKYCSTLLLLTAGLGQLLKTYLSLTHLPLEHRPYFLLNSPKD
MQVFPSISDKALFAAELLIVKSKFALPHMTSFWIEAIAAFQQGRYADCVILLLPQLECSL
RLVFTVVNKCPNRMLTAESAVLYTTFDEILTEQLDSGSENQVPYTLGEPAMEFLLDFLNH
QEGPRIRDHLSHGEIQLNEFPKEIANQLMFFSLVMLYKNVEHEDVFFKEMADVFNPLINA
VESYKSMFHPIALLQKQVIECCDSLQEWTHLPSPPDHSEQVRKVEGSADPGMLFTHETLY
IISLHKHQIKDFTDVEDLDYCILTDKFTTMTNLCNKHIKKLFCHRWVVEVVGILRKVSTQ
LYLISRNVIFISELRYEQWMQKALRSRQRQNYIRMLYSIKILTPILRLFVMLVIVNMQNI
HTILEKNLVDYQKYIKYLKSILQYAENMSSYTSFEKNRWDETIELTRRILLKITTFNDKH
ELSQAIKDNQP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaccatctactgttagtacctgcctatctccagcagttcactatatgatctgc
aaggttggatttgagctgcagggcagttatgatatcagaagaatcctaactatagacaat
gaagtgtgctgggaggctctcagtgagaatatgtgttataaagctacaggggagtttctg
gattttatacaaagcatcaggcagctgggaccgttgtgtcaagcagtccatacacatttc
acatcactttcctctacagagtttgaagaacagtttggatggtgcttccactggactgaa
aatacagagttatttcttagagcttttaaagcactgaagagcttaagcggtgttaatatc
tccctgagtatgatgaaagtgacatcatgtttagagagatcactgggtgatgtttattta
atggttgggaaggaatgtcctttcttactaagagatctgctggcatctacagaactggct
gcaatcctcagtaaaccagtgatggatgtgctaaaggtattcctaggctcaccagaaagc
cttaatcttcgaaacatactgtggcatggatttgcatctcctgatgatattccggccaag
tattgttccacccttttgctattaacagctgggttaggacagctgctaaaaacctacctc
tccctaacccatttgccacttgaacatagaccttactttctgttgaatagccctaaggac
atgcaagtatttccaagtatcagtgacaaggcactttttgctgcagaattattgattgtc
aagtctaaatttgcgttgccacatatgacatcattctggattgaagccattgcagctttc
cagcaaggcaggtatgcagattgtgttatactattacttcctcaacttgaatgcagtcta
cgtttggtttttacagtggttaataagtgcccaaacagaatgcttactgctgagtctgct
gttttatacacgacttttgatgagatcctgactgagcaactggatagtggatctgaaaat
caagtcccatacactttgggagaaccagcaatggagtttctattggactttttgaatcat
caggaaggcccacgaataagagaccatctcagccacggggaaatacaactgaatgaattt
cccaaagaaatagccaatcagttaatgtttttttctctggtgatgctatataagaatgta
gagcatgaggatgtttttttcaaggagatggctgatgtgtttaatccgttgattaatgct
gttgaaagctacaaatcaatgtttcatccaattgctctacttcaaaaacaggtaatagaa
tgctgtgacagtcttcaagagtggacacatcttccatctcctcctgatcattctgaacaa
gttagaaaggtagaaggcagtgcagaccctggaatgttgttcactcatgaaacactatat
attatatccttgcataaacaccaaataaaggatttcactgatgtggaggatttggactac
tgcattttaacagacaagtttacaactatgaccaacctttgcaacaagcatattaagaaa
ttgttttgccatcgatgggttgtggaagtggttggtattctacgtaaagtgagcacacaa
ctttaccttatatcaagaaatgttatatttatctcagagctcaggtatgaacaatggatg
cagaaagcactacgctcccgtcaaaggcagaactacatacgtatgttgtacagcatcaag
atcctaactcctattcttcgattatttgtaatgttggtgattgtgaatatgcagaacata
cacacaattcttgagaagaatttagtggattaccagaaatatataaagtatctaaaatca
attctacagtatgcagagaatatgtcttcttacacaagttttgagaagaacagatgggat
gaaactattgaactaaccagaagaattctcttaaaaataacgacgttcaatgataagcat
gaattatctcaagcaataaaagataaccagccataa
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