Xenopus laevis (African clawed frog): 108718087
Help
Entry
108718087 CDS
T01010
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108718087
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108718087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108718087
NCBI-ProteinID:
XP_041420790
UniProt:
D2WK21
LinkDB
All DBs
Position
5S:complement(94664690..94943240)
Genome browser
AA seq
311 aa
AA seq
DB search
MYSMMETELKPPAPQQPSGGNSNSASNNQNKNSPDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YTLPGGLLAPGANAMTSGVGGSLGAGVNQRMDTYAHMNGWTNGGYGMMQEQLGYPQHPGL
NAHNAPQMQPMHRYDVSALQYNSMSSSQTYMNGSPTYSMSYSQQGPPGMSLGSMGSVVKS
ESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPESAAQSRLHMSQHYQSASVAGT
GINGTLPLSHM
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagaccgagctcaagccccccgccccccagcagccttcggggggc
aactccaactctgcgtccaacaaccagaataagaacagcccggaccgagtgaagagaccc
atgaacgccttcatggtatggtccaggggccagaggagaaagatggctcaggagaacccc
aagatgcacaactcggagatcagcaagaggctgggggctgagtggaagctcctctccgag
gccgagaaaagacccttcatcgacgaggccaagaggctgcgagctctgcacatgaaggag
catccggattataaatacaggcccaggaggaaaaccaaaaccctcatgaagaaggataag
tacactctgcccgggggcttgctggctcctggggccaacgccatgacttctggggtcggg
ggcagcctgggggccggggtcaaccagaggatggacacttatgcccacatgaacggctgg
accaacggggggtatggcatgatgcaagaacagctcggatacccccaacacccgggcctc
aacgcgcacaacgcgccccagatgcagcccatgcaccgctatgatgtcagtgccctgcaa
tataactccatgagcagctcgcagacttacatgaacggctcgcctacctacagcatgtcc
tactcccagcaagggcccccgggcatgtctctgggatccatgggctcggtagtcaagtcg
gaatccagctccagtccacctgtagtcacctcttcttcccattcgcgggctccgtgccag
gcaggggacctccgggacatgatcagtatgtacctacctggggcagaagtgccagagtcc
gcagcgcaaagcagactgcacatgtcgcaacactatcagagtgcctcagtagcgggcaca
gggatcaatggcacgctgcctctgtcgcacatgtga
DBGET
integrated database retrieval system
