Xenopus laevis (African clawed frog): 108718177
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Entry
108718177 CDS
T01010
Symbol
arhgef4.S
Name
(RefSeq) uncharacterized protein arhgef4.S isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108718177 (arhgef4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108718177 (arhgef4.S)
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108718177 (arhgef4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
108718177
NCBI-ProteinID:
XP_018121336
Xenbase:
XB-GENE-17341169
UniProt:
A0A8J0VDF3
LinkDB
All DBs
Position
5S:complement(114341973..114464655)
Genome browser
AA seq
1811 aa
AA seq
DB search
MIACRLVHNSLHIFCSELQPKTSWRVSNPLCRILKRRPPGKTPEPNEDSNTKLDFNKDHC
GEPCLQEVGTFCQEQEEDYFETRSYFSESPSELKSEVFESISDAESVSSETNDELIRRSD
CLFLEKEEALYSLNNDDDGLYSNIIVNSNEECNKNVLAETASETNVLHRTLTFDQEQLDI
SETDNDATQLKDFLRPVDGCTNNIDINGLERKQVSLKDVFGCQAGLQSTGEIAKSKSENC
LNCAGSEKDIFTGGPSQSLPNISFEISCYSDFSSQHGIASVQSKQQICLESPSQEEINVD
CYLNSVSQNGGLLTYTEKEKHISEDIVHLQDSDRSTQLCEGENVLSPAEHNEFQSILDDD
IKETRGSMLAMDMNNSTEKVGSILSDSFQDIFKGYWEEATESKEKQNMTLGGINNSSLLR
KQISRQEPISLLEDLQVIAESKGSSNSQQDRSAVILLSIQQPGAQTSWKETEQNSYKHEN
GSSSHLNSNEHLTDSRDSLNYHLVYKSPDSMGCVEQGEDEQNSSTLVDINRKISLFQKES
ERMLVQEHAETHGRHLLDILLEKEQNNSPEINIQTAKTKSFKQKNNKDPEFHSYDYKVES
IGSNLDQGDNVFFEQRTYLEATQDSEGDESDVEVSFSEENRNPCLATAEDSRDVMYYSSI
AKKMDNIDTVGDNENSSSSSEGTEGSMGNHWRSEINHIEDKKNSVKLSGEQNQTKIAEFE
DSKTEEKEDTNNKIKGMNIKNNDIFKKYLSAKIPTPYGSQLAIPNTEETPDFSDEDVYGS
SFLYNRSMRMASGTGRIDLDNFTRLKCGVAPPSTNNKSDNQQRQGSCKPPNENWETKSDR
ITESKRLKERLMWAHKSFSSMFDFKNNDKDIANQSLEGSSREEKKKSKPLQSSWKTLRNS
KNKDKESFKRLSVLNLSAHVINTNKSRGASKGNGNEPPVFDPFKKPSSMEIKPNLTNDTT
TESNSEPLEDKEKHKEWDLKYDGSLQTSCDESMFFSNFDSNESHLLNKQPSITTLVPNSE
INSMPSRPLSPKPFSQWPSFQRRSLLNSRISATSMTSLAYRSPAEGCPDSPETAVKTWGG
HLTERHSPKDDGSVSSLSKPSLNTASSITDILRDEDSRQVVPSTPLKMQRERNALLYKKR
PADLTTSQFLPINSENRTLTLPQMASMSHKRDSEQTKPKALFKSLSCDNVWVCERNQESK
LDKSIDAGDLMRNQSKASMSASNGPPEIFRRFPLKVHAFSRSTPTRLDLVGCVRRTSMSV
FNNGSTSRPSLFDDLGSDEDFYDELHVSGHRFVGGGEQLAINELISDGSVVYAEALWDHV
TMDDGELGFKAGSVIEVMDATNKEWWRGRIVDSKGWFPASFVRLRVNQDEPMEDCVTKAG
DKDQDPRNVPRRNGIGSNNKDQMRTNVINEILNTEKHYIKHLKDICEGYIKQCRKRDDMF
TEEQLWTIFGNIEEIYKFQKKFLKTLEKRINKEAPHLSEVGSCFLEYQTDFQIYSEYCNN
HPNACTELSKLSKAKKYVHFFETCRLLQKMIDISIDGFLLTPVQKICKYPLQLAELLKYT
NPQHRDYTNVEAALDAMKNVAKLINERKRRLENIDKIAQWQSSIEDWEGEDILARSSELI
HSGELTKISHQQPKGQQRIFFLFDHQIVYCKKDLLRRDILYYKGKINMDDMEVVNVDDGK
DKDFNITVKNAFKLQSKVSEEIHLFLTKKPEHKQRWLQAFEEERKQVHLDKETGFSISEI
QKKQAMINASKPHPSGKPKAVNRSYYDFWMKQKHPTLPADLPQQQVFMLAEPKRKPSNFW
QNISRLTPFRK
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgtgcagacttgtgcacaatagtcttcacatattctgctccgaattacaacca
aaaacgagctggagagtctctaaccctctgtgccggattttaaaaagacgaccaccgggt
aagacccctgagcccaatgaagactctaacactaaattagatttcaacaaagaccattgt
ggggaaccctgcttgcaagaggtgggaacgttttgtcaggaacaggaggaagattatttt
gaaacaaggtcatatttcagtgaaagcccatcagaattaaaaagtgaagtatttgaaagt
atttcagatgctgagtcggtttctagtgaaacgaatgacgaactaatcaggagatctgat
tgccttttcctggaaaaagaagaagctttgtattcactgaataacgatgacgatggtctt
tattccaacatcattgtgaacagtaatgaagaatgcaataaaaatgtgctggcagagact
gcttctgaaacgaatgtgttgcaccgaactttaacatttgaccaagagcagttggatata
tctgaaactgacaatgatgccactcagctaaaagatttcttaagaccagtagatggttgc
acaaacaatatagatatcaatggattagaaagaaaacaagtcagccttaaggatgtattt
ggatgccaggcaggattacaatcaactggagaaattgcaaaatcaaaatcggaaaactgc
cttaattgtgcagggtcagagaaagacatttttacaggagggcccagccaaagtctgcct
aatatcagttttgaaatatcttgttattctgacttctctagccaacatggaattgcaagt
gtacaaagtaaacagcaaatatgtttggagtctccatctcaagaggaaattaatgtagac
tgttatttaaattctgtatctcagaatgggggactcttgacatatacggagaaagaaaaa
cacatttccgaggacattgttcatttgcaagattccgatcgttctactcagctatgtgag
ggggaaaatgtgttatcacctgcagaacacaatgaatttcaaagcattttagatgatgat
ataaaagaaactagaggctctatgttagcaatggacatgaataattcaacagaaaaggtg
ggtagtattttatctgattcttttcaagatatatttaaaggttattgggaagaagccaca
gaatctaaagaaaaacaaaatatgacactaggtggtattaacaacagcagcctgttaagg
aaacaaattagcagacaagaaccaataagccttttagaagaccttcaagttattgctgaa
tcaaaaggctcctcgaatagccaacaagacagatctgcggttattttactatccattcaa
cagccaggagcacaaacatcatggaaggaaactgagcaaaattcatataaacatgaaaat
ggcagttcttcacatttaaacagcaatgaacatttaactgatagcagagattcattaaat
taccacctagtttataaatccccagattcaatgggatgtgtggaacaaggagaagatgag
cagaatagctccactcttgttgacataaacagaaagatttctctctttcaaaaggaatca
gaaagaatgcttgttcaagaacatgcagaaacccatggcagacacttgttggacatattg
ttagaaaaagaacaaaacaattcccctgaaataaatatacaaacagctaaaacaaagtcc
tttaagcaaaaaaataataaagatccagaattccatagttacgattataaggtggaatcg
attggttctaatcttgaccaaggtgacaatgtcttctttgaacagagaacataccttgaa
gccacacaagattctgaaggagatgaaagtgatgttgaagtttcattctcagaagaaaat
agaaatccctgtcttgcaacagctgaggacagcagagatgttatgtattattccagtatt
gcaaagaaaatggacaatatagatacggtgggtgataatgaaaacagcagttccagcagt
gaaggcactgagggcagcatgggaaaccactggagaagtgagatcaaccatatagaagac
aaaaaaaacagtgtaaagttgtccggggaacaaaaccaaaccaaaatagcagaatttgaa
gattccaaaacagaagagaaagaggatactaataacaaaataaaagggatgaatataaaa
aataatgatatttttaaaaaatatctgtcagctaaaatacctacaccatatggctcacaa
ctagccattccaaatacagaggaaacgccggacttctccgatgaagatgtatatggaagt
agttttctttacaacaggagtatgaggatggcatcagggactgggagaattgatcttgat
aattttaccagattaaaatgtggtgttgcaccaccaagcaccaacaataaatcagataat
cagcaacgtcaggggtcctgcaaacccccaaatgaaaactgggaaaccaagagcgacaga
atcacagaaagtaaacgattaaaggaaagattgatgtgggcgcataagtctttctccagt
atgtttgattttaaaaataatgataaagacattgccaaccagagtttagagggctcatct
agagaggagaagaaaaagtcaaagccacttcaatcatcctggaaaacactccgaaattcc
aaaaacaaagataaggagtcatttaagagactcagtgtgttaaatttatcagcacatgtt
ataaatacaaacaaatccaggggggcttccaagggaaatggaaatgaaccgccagttttt
gatccattcaaaaaaccttcctctatggaaataaagcctaatttgaccaatgatacgaca
acagagtccaattcagaacctctggaagataaggaaaaacataaagaatgggaccttaaa
tatgatggttctttacaaacatcttgcgatgaatcaatgttcttttcaaactttgattca
aatgaatcacatttattaaacaaacagccgtctattacaactttagtcccaaattctgaa
ataaactccatgccatctcgaccactgagtccgaagccttttagccaatggcccagcttt
cagcgtaggagcttgcttaattccaggataagtgccacctcaatgacctctctagcatac
agatctccagcggaggggtgcccagattctccagagacagcagtaaagacatggggaggg
catttaacagagagacatagtcccaaagatgatggcagtgtcagcagcctgtcaaagcca
agcctcaacactgcttcttcaataacagacatactaagagatgaggatagtagacaagtt
gtcccatcaacgccactaaagatgcaaagggagagaaatgctttgctttacaagaagaga
cctgcagacctgacgacttctcagttcctgcctatcaacagtgaaaatagaactctgaca
ctgccccagatggcttccatgagtcacaaaagggattcagaacaaacaaagcccaaagct
ttattcaagagcctgagttgtgataacgtatgggtatgtgaaaggaaccaagagagcaaa
ctagacaagtctatagatgcaggagatctcatgaggaaccagtcaaaagcttctatgagt
gcctctaatggtcctccagaaatattccggagattccctttgaaggttcacgcgttttcc
cggagcacaccgaccaggcttgatctagtgggctgtgtgagacgcacgtctatgtcagta
tttaataatgggtcgacgagcagaccttcgctgtttgatgacttggggagtgatgaggat
ttttatgatgaactacatgtttccggtcaccgctttgtcggagggggcgagcagctggca
ataaatgagctgataagtgatggcagtgtggtatacgctgaagctctctgggaccatgtc
actatggatgatggagaactgggttttaaggccggcagtgtcattgaagtaatggatgct
accaacaaagagtggtggcgggggaggattgtagacagtaaaggatggtttccagccagc
tttgttaggctccgtgttaaccaggatgaaccaatggaagattgtgttactaaagcaggg
gacaaagaccaggatcctagaaatgtcccaaggagaaatggcattgggtcgaacaacaaa
gatcaaatgagaactaatgttattaatgagatcttaaatacagaaaaacattatattaag
cacctgaaggatatttgtgagggctacatcaagcagtgccgtaaaagagacgacatgttt
acagaagagcaactgtggacaatcttcgggaacatcgaagagatctacaaattccagaaa
aaattcttgaaaacacttgaaaaaagaattaacaaagaagctcctcatctgagtgaggtc
ggctcttgctttttggaatatcaaacagattttcaaatctactcagaatattgcaacaat
catcccaacgcctgcacagaactttccaaactttccaaggccaagaagtatgtccatttc
tttgagacctgccggttattgcagaagatgattgatatctctatagatgggtttctgtta
accccagtgcagaagatctgtaaatatccacttcagctggcggaacttctaaagtacacc
aatccccaacacagagactacacaaatgttgaggcagccttggacgcaatgaaaaatgtt
gccaagcttatcaatgaaagaaagcggagacttgagaacattgataaaatagcccagtgg
caaagttctatagaggattgggagggagaagatatccttgccagaagctctgagcttata
cattctggggaattaaccaagatttctcaccaacagccaaagggacagcagcggatattt
tttctatttgatcatcaaattgtttactgcaagaaggacctgttacgccgtgacattctg
tattataaagggaagattaacatggacgatatggaagttgtaaatgtagatgacggtaaa
gacaaagactttaatatcactgtaaaaaatgcattcaagcttcaaagcaaagtctcggaa
gagattcaccttttcctgacaaagaaaccggagcacaagcagcgttggctacaggccttt
gaggaagaaaggaaacaggtgcatctggataaagagacaggtttcagcatcagtgaaata
cagaagaagcaggctatgattaatgccagtaagcctcacccgtcaggaaagcctaaagct
gtcaataggtcatactatgatttctggatgaagcagaagcaccccactctgcctgccgac
ctcccacagcaacaagtcttcatgctggctgaacccaagcgtaaaccctccaatttctgg
cagaacatcagccgactgaccccattcagaaaataa
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integrated database retrieval system
