KEGG   Xenopus laevis (African clawed frog): 108718243
Entry
108718243         CDS       T01010                                 
Symbol
odc1.S
Name
(RefSeq) ornithine decarboxylase 1-like
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla00330  Arginine and proline metabolism
xla00480  Glutathione metabolism
xla01100  Metabolic pathways
xla04148  Efferocytosis
Module
xla_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:xla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    108718243 (odc1.S)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    108718243 (odc1.S)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    108718243 (odc1.S)
Enzymes [BR:xla01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     108718243 (odc1.S)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC DUF5448 AP_endonuc_2
Other DBs
NCBI-GeneID: 108718243
NCBI-ProteinID: XP_018121429
Xenbase: XB-GENE-17336191
UniProt: A0A1L8G533 A0A974CTA4
LinkDB
Position
5S:complement(126083427..126092111)
AA seq 460 aa
MNGFSNDDFDFSFLEEGFCARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHLRWFKALP
RVAPFYAVKCNDSKAVVKTLSILGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVSQI
KYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIATDDSKAVCRLSVKFGATLKTSRVL
LERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGFNMYLLDIGGGFPG
SEDVKLKFEEITSVINPALDKYFPTDSAVKIIAEPGRYYVASAFTLAVNIIAKKVMVNEQ
SGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKPDEKFYSSSIWGPT
CDGLDRIVERFELPELQVGDWMLYENMGAYTVAASSTFNGFQRPTLHYVMSRPHWQLMQD
IKEHGILPEVPEVSALHVSCARESGMELTPTVCTAASINV
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaacggcttcagcaatgacgactttgacttcagcttcctggaggaaggcttctgtgcc
cgggatatcgtggagcaaaaaataaatgaagtgtccttatctgatgacaaagatgctttt
tatgttgccgatcttggtgacattgtgaaaaagcacttgcgttggtttaaagctctcccc
cgtgtcgctccattttatgccgtaaaatgcaatgacagcaaagccgttgtgaagactctc
tccattcttggtgccggctttgattgtgccagtaagactgaaatccaattagtacagagt
attggagtttcccccgagcggattatctatgcaaacccatgtaaacaagtttcccagatc
aaatatgcagctagctgtggtgtggaaaagatgacttttgatagtgaagttgaactaatg
aaagtggcaaggaatcacccaaatgcaaagcttgttctgcgcatagcaactgatgactca
aaagcagtctgccgcctcagtgtgaaatttggtgccacccttaaaacaagccgggtactt
ctggagcgagcaaaagagcttaatgtggatataattggtgtaagtttccatgttggcagt
ggctgcactgatcctcagacttatgtgcaagctgtttcagatgccaggtgtgtttttgac
atgggggccgagcttggatttaacatgtatcttcttgatattggtggcggatttcccggt
tcagaggatgtgaaactgaagtttgaggagataacatctgtgataaacccagctctggat
aaatacttcccaacagattctgcagttaaaatcattgcagagcctggaagatactatgtc
gcttcagctttcacactggccgttaatatcattgccaagaaagtaatggtgaatgagcaa
agtggatctgatgatgaggaggatgcagccaacgacaagactctgatgtactatgtgaat
gatggagtgtatggatcattcaactgcatcttgtttgatcatgcccatgtcaagccagtt
ctaacaaagaaaccaaaaccagatgagaagttctactcgagcagcatttggggaccaaca
tgtgatggactggatcgtattgtagaaaggtttgagctgccagagctgcaagttggagat
tggatgttgtatgaaaacatgggtgcctacactgtcgctgcttcctccacattcaatgga
tttcagagaccgacccttcattacgtcatgtcacgaccacactggcaactgatgcaggat
attaaagaacatggcattctccctgaagtaccagaagtgagcgcactccatgtatcctgt
gctcgggagagtggaatggagcttactcctaccgtctgtactgctgccagcatcaacgta
tag

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