Xenopus laevis (African clawed frog): 108718243
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Entry
108718243 CDS
T01010
Symbol
odc1.S
Name
(RefSeq) ornithine decarboxylase 1-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00330
Arginine and proline metabolism
xla00480
Glutathione metabolism
xla01100
Metabolic pathways
xla04148
Efferocytosis
Module
xla_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
108718243 (odc1.S)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
108718243 (odc1.S)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108718243 (odc1.S)
Enzymes [BR:
xla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
108718243 (odc1.S)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
DUF5448
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
108718243
NCBI-ProteinID:
XP_018121429
Xenbase:
XB-GENE-17336191
UniProt:
A0A1L8G533
A0A974CTA4
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Position
5S:complement(126083427..126092111)
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AA seq
460 aa
AA seq
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MNGFSNDDFDFSFLEEGFCARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHLRWFKALP
RVAPFYAVKCNDSKAVVKTLSILGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVSQI
KYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIATDDSKAVCRLSVKFGATLKTSRVL
LERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGFNMYLLDIGGGFPG
SEDVKLKFEEITSVINPALDKYFPTDSAVKIIAEPGRYYVASAFTLAVNIIAKKVMVNEQ
SGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKPDEKFYSSSIWGPT
CDGLDRIVERFELPELQVGDWMLYENMGAYTVAASSTFNGFQRPTLHYVMSRPHWQLMQD
IKEHGILPEVPEVSALHVSCARESGMELTPTVCTAASINV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcttcagcaatgacgactttgacttcagcttcctggaggaaggcttctgtgcc
cgggatatcgtggagcaaaaaataaatgaagtgtccttatctgatgacaaagatgctttt
tatgttgccgatcttggtgacattgtgaaaaagcacttgcgttggtttaaagctctcccc
cgtgtcgctccattttatgccgtaaaatgcaatgacagcaaagccgttgtgaagactctc
tccattcttggtgccggctttgattgtgccagtaagactgaaatccaattagtacagagt
attggagtttcccccgagcggattatctatgcaaacccatgtaaacaagtttcccagatc
aaatatgcagctagctgtggtgtggaaaagatgacttttgatagtgaagttgaactaatg
aaagtggcaaggaatcacccaaatgcaaagcttgttctgcgcatagcaactgatgactca
aaagcagtctgccgcctcagtgtgaaatttggtgccacccttaaaacaagccgggtactt
ctggagcgagcaaaagagcttaatgtggatataattggtgtaagtttccatgttggcagt
ggctgcactgatcctcagacttatgtgcaagctgtttcagatgccaggtgtgtttttgac
atgggggccgagcttggatttaacatgtatcttcttgatattggtggcggatttcccggt
tcagaggatgtgaaactgaagtttgaggagataacatctgtgataaacccagctctggat
aaatacttcccaacagattctgcagttaaaatcattgcagagcctggaagatactatgtc
gcttcagctttcacactggccgttaatatcattgccaagaaagtaatggtgaatgagcaa
agtggatctgatgatgaggaggatgcagccaacgacaagactctgatgtactatgtgaat
gatggagtgtatggatcattcaactgcatcttgtttgatcatgcccatgtcaagccagtt
ctaacaaagaaaccaaaaccagatgagaagttctactcgagcagcatttggggaccaaca
tgtgatggactggatcgtattgtagaaaggtttgagctgccagagctgcaagttggagat
tggatgttgtatgaaaacatgggtgcctacactgtcgctgcttcctccacattcaatgga
tttcagagaccgacccttcattacgtcatgtcacgaccacactggcaactgatgcaggat
attaaagaacatggcattctccctgaagtaccagaagtgagcgcactccatgtatcctgt
gctcgggagagtggaatggagcttactcctaccgtctgtactgctgccagcatcaacgta
tag
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