Xenopus laevis (African clawed frog): 108718290 Help Entry 108718290         CDS       T01010                                  Symbol fdft1.S Name (RefSeq) squalene synthase isoform X2   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism xla  Xenopus laevis (African clawed frog) Pathway xla00100   Steroid biosynthesis xla01100   Metabolic pathways Module xla_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:xla00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     108718290 (fdft1.S)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:xla01006]     108718290 (fdft1.S) Enzymes [BR:xla01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      108718290 (fdft1.S) Prenyltransferases [BR:xla01006]  Terpene biosynthesis   Squalene/phytoene synthase    108718290 (fdft1.S) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY DUF4073 Motif Other DBs NCBI-GeneID:  108718290 NCBI-ProteinID:  XP_018121501 Xenbase:  XB-GENE-6488953 UniProt:  A0A8J0VGR5 LinkDB All DBs Position 5S:complement(137039265..137055573) Genome browser AA seq 415 aa AA seqDB search MDILRSLGHPEEIYNLFKFKMGGCRAVLPTLDPDSMSDSLQTCYRYLNETSRSFAAVIQA LDGELRHAVCIFYLVLRALDTVEDDMTIALETKTPMLHDFHTYLYQADWRYMDSKEKDKQ VLEDFPTISLEFRKLAVIYQEVIADICHKMGVGMAEYLEKKVQTLQEWDQYCHYVAGLVG IGLSRLFSASELEDPIVGLDTQLSNSMGLFLQKTNIIRDYLEDQTEGREFWPKEVWGKYG KKLSDLANPEKIIPAVHCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATL AACYNNQQVYKGVVKIRKGQAVTLMMDATNIEAVRAIMYQYVEEIYQKIPLTDPSSGRTQ HIIASVRNLSLSDGSLASRNHFSPIYLSCAMLLAAISWQYLSTVSQVSEEVHSRQ NT seq 1248 nt NT seq  +upstreamnt  +downstreamnt atggacatactcaggtctctcgggcacccggaggagatatacaatctcttcaagttcaag atgggaggctgcagggctgtgctacccacactggacccggactccatgagcgacagcctg cagacctgctaccgatacctcaatgagaccagcaggagtttcgccgctgttatacaagcg ctggatggggagttgcggcacgcggtgtgtatattctacctggtgctgagggctctggat acggtggaggacgacatgaccatcgctctggagacaaagacccccatgttgcacgacttt cacacctacctgtaccaggccgactggaggtacatggacagtaaagagaaggacaagcag gtgctggaggatttccccacgatttccctggaattcaggaaactggcagtgatttaccag gaagtcattgccgatatctgtcacaagatgggagtcggaatggctgaatatttggaaaag aaggtccagaccctgcaggaatgggaccagtactgtcactacgtcgctggacttgtcggc atcggattgtctcgtctgttttctgcctccgaactggaagatcccatcgtgggactggat acccagctctctaattccatgggactgttcctgcagaaaaccaacatcatccgagactac ctggaggaccagacggaaggccgagagttctggcccaaagaggtttggggcaagtatggg aagaagctgtcggatttggcaaacccggagaagattatcccagcggtgcattgtatgaat gagctcatcaccaacgcattacatcatgtccccgacgtcctcacttatctgtcccggcta aagaaccagagcgtcttcaacttctgcgcaattccacaggtgatggccattgccactttg gccgcatgttacaacaaccagcaagtgtacaaaggggttgtaaagatccgcaaagggcag gcggtgaccctaatgatggacgccaccaatatagaggcagtgagagccatcatgtaccag tatgtagaggagatctaccagaaaatccccctcacagacccctcgtcgggccgcacccaa cacatcatcgcttcagtcaggaatctgagtttatccgacggctcattggcttcccggaac catttctcccccatttacttgtcgtgtgcgatgctattggctgccatcagctggcagtat ctcagcaccgtgtcccaggtatccgaggaggttcatagtcgccagtga

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