Xenopus laevis (African clawed frog): 108718392
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Entry
108718392 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108718392
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108718392
09142 Cell motility
04820 Cytoskeleton in muscle cells
108718392
04810 Regulation of actin cytoskeleton
108718392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108718392
04515 Cell adhesion molecules [BR:
xla04515
]
108718392
04090 CD molecules [BR:
xla04090
]
108718392
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108718392
Cell adhesion molecules [BR:
xla04515
]
Integrins
Integrin alpha subunits
108718392
CD molecules [BR:
xla04090
]
Proteins
108718392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
vWA_SIBA-E
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108718392
NCBI-ProteinID:
XP_018121667
UniProt:
A0A8J0VGW2
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All DBs
Position
1L:complement(209976888..210073236)
Genome browser
AA seq
1179 aa
AA seq
DB search
MGFSTMGCYYAECLYLLTALLKLTEAFNVDVKNGLSFSGSAEDMFGYTVQQFENDDGKWV
LIGSPLEGQPKHRMGDVYKCPVLMPSNCSKLDLPSYTTIPDIIEVKENMAMGSTLVKNPK
GGFLACGPLYAYRCGSMHFTTGICSNVSSSFKVLNSIAPSVQGCSSQLDIVIVLDGSNSV
YPWDSVTDFLQKLLKNININPSQTQVGIVQYGENVTHEFNLNTYDSTAKVLEASMRITQR
GGSQTMTALGIDTARKDAFTEARGARKGVKKLMVVVTDGESHDNYRLNGVIKECEKDDIQ
RFSIAILGSYSRGNLSTEALVEEIRSIASEPKEKHFFNVSNELALLNIVESLGERIFALE
ATNEEHASSFEMEMSQTGLSAHYSKDWAMLGAVGAYDWNGTVVMVNSDTILTPNNHTFRT
KSDEKNEPLAAYLGYALSSATVHGGEIYIAGQPRYNHTGQVIIFKLNGQEIEILQTLKEN
RXIGSYFGSVLTTVDVDGDSFSDILLVGSPMYMGSAKQEQGKVYVYRIHGEEMQYQMSLE
PLNQTCCSQQKEISCHNENKNEPCGSRFGTAIAAVTDLNLDGFNDVAIGAPLEGDHRGAV
YIYHGSGKSIKGNYAQRIPSGGDGKKVRFFGQSIHGEMDLNGDGLTDVTIGGLGGASLFW
SRDVAEITVTTEFTPNALDIEKKNCDINNRPTVCIKAKFCFNLLLKSDENKKPSSNIIYT
ITLDSPRFTSRAFFIDSQDRKYQGVIGDAVKCLNHDFYMVEKPDFLNSINVLVEFNFPDP
EKGPVLNSELPNFYNSYIPFTMDCGLEQKCITDLVLDAKISMDGTSFNEAIVKSTKDKFN
LTLTVKNIKKSAYNARVVVKYSPNIILAATEDKQKVSCELDHDVTCKIGYPFLKENEMSS
FKITFQFNVSHLLDNAFIFVNATSDSEEKSETLLNNRKNITFPVKYESWLTIVSSAKEFH
VPIPANESIPATINSTEAIGAVVNINYEIKKNDFIPMPKVSFRLSFPYKTPDNNILLYLT
NVSSSHNVNCSTDLLDPLSINSGKTYVMPEFKENLRDTILDCRRNQCSSFDCTVDPANDT
HVNVSLRVWKSTFIKAGMHNLNLVLNAKLKSESSLLILNPESRNYETMIKLSKELEHGRV
PFWVIPLSIIIGLLILALIIFAMWKAGFFKRPLKEKMEE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggattttcaacaatgggctgttactatgccgagtgcttgtatctccttacagcattg
ttgaagcttacagaagcatttaatgtggatgtgaagaatggactttctttcagtggctca
gctgaagatatgtttggatacacagttcaacagtttgaaaatgatgatggcaaatgggtg
cttattgggtctcccctggaaggacaaccaaaacacagaatgggagatgtttacaaatgt
ccagttctaatgccatcaaattgttcaaaacttgacctaccaagctatacaaccatccct
gatataattgaagtaaaagaaaatatggccatggggtcaactttggtgaagaatcctaaa
ggtggttttctggcatgtggccccctgtatgcttacagatgtggaagtatgcactttaca
actggaatctgctctaatgtcagttcatcatttaaagttttaaattccattgctccatca
gtccaagggtgcagttcccagttagacattgtgatagtccttgatggttcaaatagtgtt
tacccatgggacagtgtcactgattttttacagaagcttctgaagaatataaatataaat
cctagtcagactcaggttggcatagttcagtatggggaaaatgtaactcatgaatttaac
ctgaatacttatgattcaacggcaaaagtgctagaggcatcaatgagaattacacaaaga
gggggatcccagacaatgacagctcttggtattgacacagcaagaaaggacgcattcacc
gaagcaagaggcgcacgaaaaggagtgaaaaagcttatggtggtggtgacagacggggag
tcacatgacaattatagactcaatggtgttatcaaggagtgcgagaaagatgacattcag
agattttcaattgcaattcttggaagctacagcagagggaatttaagtacagaggccctt
gtagaagagataagatccattgccagtgagcctaaggagaaacatttctttaatgtctcg
aatgagttggctcttttaaatattgtggaatccctgggagaaaggatattcgctcttgaa
gctacaaatgaagagcacgcatcatcctttgaaatggaaatgtcacagaccggattgagc
gctcattactcaaaggactgggcaatgcttggtgctgttggagcgtatgactggaatgga
actgtggtgatggtgaattctgatactattttaacacctaataaccatacatttagaaca
aaatcagatgagaagaatgaacctctagcagcttaccttggttacgctttgagttctgca
acagtacatggcggggaaatctacattgcagggcaaccccgatataatcataccggccaa
gtgattatttttaaattaaatggacaggaaattgagatacttcagacattaaaggagaac
aggtgaattgggtcatattttggcagtgtgctgacaacagtggatgtggatggagattca
tttagcgacattcttctagttggatctccaatgtacatgggaagtgccaaacaagagcaa
ggaaaagtgtatgtgtatagaattcatggggaagaaatgcagtatcagatgagcttagag
ccattaaaccagacttgctgttctcagcagaaagaaatcagctgccacaatgagaacaag
aacgagccgtgtggttctcggtttggaacggccatagcagctgtaacggacttaaatctg
gatgggttcaatgatgtcgcaataggagccccattagaaggggatcatcgaggggctgtt
tacatttatcatgggagtggaaaatctataaaaggcaactatgctcagcggatcccatca
ggcggtgatggaaagaaagtcagattctttggacagtctattcatggtgaaatggattta
aatggtgatggtctgactgatgtaactattggaggacttgggggagcttctcttttttgg
tctcgggacgttgctgaaataacagtaaccacagagtttacgcctaacgcacttgatatt
gaaaagaagaactgcgatattaacaacagacccacagtctgcatcaaagcaaagttttgt
tttaatctactgctcaagtctgatgagaacaaaaaaccaagctcaaacatcatctatacc
atcaccttggactcaccccgcttcacctctcgagcctttttcattgactctcaggataga
aaataccaaggagtcattggagatgccgtgaaatgtctcaatcatgacttttatatggtg
gaaaaacccgatttcttgaattccattaatgttttggttgaatttaattttcccgatcca
gaaaaggggccagttctcaacagcgaacttccaaacttttataactcatatattcctttc
acgatggactgtggattggagcaaaaatgtatcactgacttagtcctggatgccaaaata
agtatggatggaaccagctttaatgaagcaattgtgaaatccactaaggacaagttcaat
ctgactctgacggttaagaacataaagaagagcgcgtataatgccagggtggtggtgaaa
tattccccaaacattatactggctgcaacggaggataagcagaaagtgagctgtgaattg
gatcacgatgttacatgcaaaataggatatcctttcctaaaggagaatgaaatgagctca
ttcaaaatcacattccagttcaacgtttcgcatcttttggataatgcattcatatttgtc
aacgcaacaagcgacagtgaagagaagtctgaaaccctgctgaacaataggaagaacatc
acgtttccggtgaaatacgaatcctggctgaccattgtaagctctgcaaaagagtttcat
gttccaattcctgcaaatgagtctataccagcaaccatcaattccactgaagccattggg
gctgtagtgaacataaactacgagattaagaagaatgattttattccaatgccaaaggtt
tccttccgcctttcatttccctacaaaacacccgacaataatattctcctttatctcaca
aacgtctcctcctctcataatgttaattgcagcactgatctcttggatccactgagcata
aattctggaaaaacatacgtgatgccagagtttaaagagaatttaagagacacaatactg
gactgcagaagaaatcaatgtagttcatttgactgcactgtagatcctgccaatgatact
catgtcaacgtgtcactgagggtatggaaatcaacatttataaaggccggtatgcacaat
ctgaaccttgttctgaatgcaaagctgaagagtgaaagctcgttgctgatcttaaaccca
gaaagtaggaattatgagacaatgattaaattatcaaaagaactggagcatggaagagta
cctttctgggttattcctcttagcattatcattggcctgctgatattagccctgatcata
tttgcaatgtggaaggctggatttttcaaaaggccactaaaagagaagatggaagaataa
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integrated database retrieval system
