Xenopus laevis (African clawed frog): 108718421
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Entry
108718421 CDS
T01010
Symbol
zfr.L
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
108718421 (zfr.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108718421 (zfr.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
108718421
NCBI-ProteinID:
XP_018122036
Xenbase:
XB-GENE-17331854
UniProt:
A0A8J0VIS0
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Position
1L:218043192..218094593
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AA seq
1124 aa
AA seq
DB search
MMAQENGAAWDKEMPSVYTNLSFSLKGSVHYQRILTPLCGSYDKELKFIKCQYKEEPMIP
ICPVVSFTYVPSRLGEEAKMATGNYFGFTHGAAAQYSQQPASGVAYSHPTTVASYTVHQA
PVAAHTVTAAYAPAVGTVAVARPAPVAVAAAANAAAYGGYPAAHTATDYGYTHRQQEAPP
PPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATVPTVAQPQPAVAETYYQTVPIA
LSLPVAPKAGYSQGAAQYTQAQQTRQVTAIKPANPSPATTTFSLYPVSSSGQPVAAAASV
VPSYTQGATYSTTAVTYSGAAYSGYEAAVYSAASSYYQQQQQQQQKQAAAAAAAAATAAW
TGTNFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALK
ASQNTTSSSSSSAAVRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI
PSTEPNVVSQSVTSAAVSKPSATSSSTSSSSGSSSSASPAVKLLTSSSSLSTSSSSKVSS
ISSTSIVKKVTTPKITFIGGNKLQSTGNKVDDGKMSEGSKATPSPAAQTQEVKIDPMSEA
AQTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQY
KKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEDRWRMEMRRYEEDMYWRR
MEEEQHHWDDRRRVPEGGYPHGPPGPPGLLGVRPGMPPQPQGPTPLRRPDSSDDRYVMTK
HAAIYPTEDELQAVQKIVSLTERALKLVSDSMADQDQTKTKESDDKKEPSKERALKGVLR
VGVLAKGLLLRGDRNVSLVLLCAEKPTRALLSRISENLPKQLSVICPEKYEVSCSIPEAA
IILSSCVEPKMQVTITMTSPVIREESTSDGDVTPGMVKDPPDVLDRQKCLDALAALRHAK
WFQARANGLQSCVIIIRILRDLCQRVPTWSVFPSWALELLVEKAISSSSGPQSPGDALRR
VFECVSSGIILKGGPGLLDPCEKNPYDTLATMSDQQREDITSSAQFALRLLAFRQIYKVL
GMDPLSQMNQRFNVHNNRKRRRDSDGVDSFEAEGKKDKKDYENF
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacaggaaaatggcgctgcttgggacaaggagatgcccagtgtttacacaaat
ctatccttttcattaaagggttctgtacattaccagaggattctcacaccactctgtggt
agttatgacaaggagctgaaattcataaagtgccagtataaagaagaacccatgattcct
atttgtccagttgtatcttttacctatgtgcccagccggcttggtgaagaagccaaaatg
gctactggcaactactttggatttacccatggtgcagctgctcagtatagccaacagcca
gcatctggtgtagcctattctcatcctacaactgtggcaagttatactgtccatcaggct
ccagttgctgctcacacagttacagcagcgtacgccccagcagttggaactgttgcagtt
gcacgtccagcccctgtggctgtggcagctgctgctaacgcggctgcttatggcggttac
cctgcagcccacacagcgacagattatggctacacacacaggcagcaggaagccccacca
ccgccccctcctgtcacaacgcagaactaccaggattcttattcttatgtccgctccact
gcacctgccgtagcctacgacagtaaacagtattaccaacaacctactgctactgtacct
actgtagctcaaccgcagcctgcagtggcagaaacgtattatcagaccgttcctatcgcc
ttgtctcttccagttgctcccaaggctggctacagccagggtgctgcacaatatacccaa
gcgcaacaaacacgacaagtgactgccatcaaaccagccaatccaagccctgccacaaca
acattctctctctatcctgtgtcctcctctgggcaaccagtagcggctgcagccagcgta
gtcccctcttacacacaaggtgctacatatagtaccactgctgtgacatattctggtgcc
gcttattctggatatgaagctgcagtgtattccgctgcatcgtcctattaccagcagcag
cagcagcaacaacagaaacaggcagcggcggctgctgctgcagcagccactgcagcatgg
actgggaccaactttactaaaaaagctccattccaaaataagcaacttaaaccgaagcaa
ccccccaaaccaccacagatacattattgtgatgtgtgcaagatcagctgtgctggccca
cagacttacaaagaacatttggaaggtcaaaagcacaagaaaaaagaagctgccttgaaa
gcctcccaaaacacaaccagcagcagcagcagcagcgcagctgttcgggggacccagaat
caactccgatgtgaactttgtgatgtttcctgcacaggagctgatgcctatgctgcacat
ataagaggagctaaacaccagaaggttgttaagttgcacaccaaacttggtaaacccatt
ccatcgactgaaccgaatgttgtaagccagtctgtgacttccgcagcagtctctaaacct
tccgccacctcaagcagcacatcaagttctagcgggagctcctctagtgcctcccctgct
gttaagctgctcacttctagctcttctctgagcacttcaagcagcagcaaagtgtccagt
atctcctctacaagcattgtgaagaaagtaactacccccaaaataacttttattggtgga
aataaactgcaatcaacagggaataaggttgatgacggcaaaatgtcggaaggctcaaaa
gcaaccccaagtcctgcagcacaaacacaagaagtgaagattgatccaatgtctgaagct
gctcagactcttgcagccttacagagcgatgtgcagcctgtaggccatgattatgttgaa
gaggttcggaatgatgaaggaaaagttatccgctttcactgcaagctttgcgagtgtagc
tttaatgacccgaatgcaaaagaaatgcatctaaaaggaaggaggcacaggcttcagtac
aagaaaaaagtaaatccagagttacaagtggaagtaaagcccagcatccgagcaagaaag
atccaggaggagaagatgcgaaaacagatgcaaaaagaagaatactggcgaaggcgcgaa
gaggaggatcgatggcgaatggaaatgaggcgctatgaagaggatatgtattggagaagg
atggaagaagagcagcatcactgggatgatagacgcagagtgcctgaaggaggttatcca
catggtcctccaggacctccgggcttgttgggagttaggcccggaatgccccctcaacct
caaggaccaacacctttacgcagaccagactcctctgatgaccgctatgttatgacaaag
catgctgcaatctacccaacagaggatgaacttcaagcagtacaaaaaatagtgtccctc
acagagcgagcacttaaacttgtgtcagactctatggcagaccaagaccaaacgaagaca
aaggaaagtgatgacaagaaggagccttctaaggagagagccctaaaaggagtcctgcgt
gttggagtacttgctaaagggttactcttgcgtggagatagaaatgtcagccttgttctt
ctctgcgctgagaaaccaaccagagccctgctaagtcgtatatccgaaaacctgcccaaa
cagctttcagttatatgcccagagaagtatgaagtttcctgctctatcccagaagcagcc
attattctgagttcttgtgtggagcccaaaatgcaagttacaataacgatgacctctccc
gttataagagaagaaagcacaagcgatggagatgtaaccccgggtatggtgaaagaccca
ccggacgtcttggacaggcaaaaatgccttgacgctctggctgctctgcgccacgctaag
tggttccaggctagagccaatggtctgcaatcctgcgtcattatcatccgtattcttcgt
gatctgtgccagcgtgtgcccacgtggtctgtctttccaagttgggctttggagttatta
gttgaaaaggctataagcagctcttcaggacctcagagcccaggggatgctctgaggaga
gttttcgagtgtgtatcatcgggcattattttgaaagggggtcctggcctgctcgatcca
tgtgaaaaaaatccgtatgacaccctagcaacaatgtctgaccaacaaagggaagatatc
acgtccagtgcacagtttgcactgaggttgctcgcgttccgtcagatatacaaagttctt
ggcatggacccgctgtctcagatgaaccagcgcttcaacgttcacaacaatcgcaagcga
aggcgagacagcgatggcgtggacagctttgaagcggaagggaagaaagacaagaaggat
tatgaaaacttctaa
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integrated database retrieval system
