Xenopus laevis (African clawed frog): 108718573
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Entry
108718573 CDS
T01010
Name
(RefSeq) desmoglein-3
KO
K07599
desmoglein 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108718573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108718573
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
108718573
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
108718573
NCBI-ProteinID:
XP_041422346
UniProt:
A0A1L8FYT9
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Position
6L:118762103..118793144
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AA seq
1179 aa
AA seq
DB search
MDWLLCAKCAVLFIIMVSLECTCNWNLQVNDGKDANGTILWNPIQLQRQKREWLAPVVHL
REEEDNRHRNPIAKVHSDKAIKKQIIYIVSGQGVDQEPFNIFLIDGKTGYLNVTGIKVDR
EVVPVFFLTVRALSGGEDVEKPLSLRVKVIDINDNAPVFSQTGFIGAIAELSSANSLVMQ
IIATDADEVNTLHSKIAYKIISQSPSDPLMFIMNQHTGEVFTVSSSLDREERSSYSLIVS
GADMDGAAGALSGQCGASINILDVNDNIPTLDYDEYSVSIDENMLQHGLLFIQVSDKDEM
YSDNWVAEFEIVSGNDGGWFAIETDATSNRGILHVVRELNYEAMQMMNLGIIVRNRAPFH
SSILSQYQAKVTNIAVQVQNVNEGYAVIPRPLTVTIPAGLSREQFFNYILVKLQMENLDT
GEIISNAVFTTDENSSKWLFIDDQGNVRLIGDLPRDTTGTDTGSGPGSGSGNHTAVIFGI
NNDEPLRTVTTTLTVNVTTPSCPVINSQPRTICSRNPQIVLQADDGAGLSTAPFVYILGP
ISDNSPFTLTRINDTSGMLTTLNTDPRNVTVQIQIINKNGQSCSVPVSILLQICQCLDNT
DTCGGVGLVKDIRSVALGPAAIGLLIMGFLALLLALLLLLLCSCGSATKNTFIPVADEYD
GAYRPWGTEGAKPEDVDVTNLLVSSSAPECYDVNSHNYISGGGLESTTAATTAATAAAGG
FGNAGVHSRSFGTGLGTATAVGTGAGLIGSGLGIHGFSGESNAAGSFTGGMSSHYRDGGT
INTAFVENYITEKAEAYANEDESRPANDCLLIYDNEGVGSPTGSIGCCSFIDEDLDDSYL
DNLGPKFKTLAEICSGKKPEPLPSAKEPKVVTSIPTVEPDISFSLNDVSNFREMSPAPVT
SSTYVTESFSSSNLPPAKPIHDPSNVVVTETYTTSGPALNPSAFTFEPHVQPNIYVTERV
VGSTSGVRGAFPEITDGSNVIVTERIMRPASGVQDFVNIQDNANVVRRERMIAPSTSRLS
GSFNFPDLSEGQNVVVTERVIQPISNVQGNVDIRSDLMDGQNVLVTERLIQPVSNISSGR
IIHPDRVGAQNVIVTEKTVRSAPAIQSRVLSPEPLLSVGSTSPNVTRSRVTTYSTVQSGP
GVQSHVLSTEPFLTQTVGSTSPSVTRSRVTKYSTMQYSK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggattggctgctatgtgcaaagtgtgcagtcttatttataataatggtatctctagaa
tgcacctgcaattggaacttacaggttaatgatggaaaagatgcaaatggaacaatctta
tggaaccctatacaacttcaaaggcaaaagcgagaatggttggcaccagttgtacatttg
agggaagaagaagacaacagacacagaaatcctatagcaaaggtccattcagataaagcc
ataaagaaacaaataatatacattgtttctggacaaggtgtcgaccaggaaccgtttaat
atattccttattgatggcaaaactggatatctgaatgtgacgggaataaaagttgatcgt
gaagttgtacctgtcttctttttaacagtaagggctctgtctggaggagaagatgtggag
aaacctctctccctgcgtgtcaaagttatagacattaatgataatgcacctgtgttctca
caaactggttttattggggcaatagctgagctatccagtgcaaacagcctggtgatgcag
atcattgctactgatgccgatgaagtaaatacattacactcaaaaattgcatacaaaatc
atttctcagagtccttctgatcccctaatgttcattatgaatcaacacactggagaagtc
ttcactgtgtccagttctctagatcgggaggaaagaagtagctattcattgattgtgagt
ggagcagatatggatggagctgccggagccctttctgggcaatgtggtgcctccataaat
attcttgatgtcaacgataacatccctacgcttgattatgacgagtattctgtttcaata
gatgaaaatatgttacaacatggactgctctttatccaagtatctgataaggatgaaatg
tactctgacaactgggtggcagaattcgaaattgtatctggaaacgatggtggttggttt
gcaattgagactgatgctacaagtaatcgtgggatattacacgttgtcagggaattgaac
tatgaagcaatgcaaatgatgaaccttggcattattgtgagaaacagggcccctttccat
tcctccattctgtctcagtaccaagcgaaggtgactaacattgccgttcaagttcaaaat
gtgaacgaaggatatgcagtcataccacgtccattaactgtgaccattccagcaggcctc
agcagggaacagttttttaactatatactggtgaaattgcagatggaaaatctggacact
ggggaaatcatatcaaatgccgtgtttactacagatgaaaatagtagcaaatggttattt
attgatgaccaggggaatgtcagacttataggcgatcttcctcgtgacaccactggcacc
gacaccggctctggcccaggctcaggatccggcaaccacactgcagtcatctttggaata
aacaacgatgagccactccgaacagttactaccacacttactgtgaatgtcacaacgcct
tcctgccctgtgattaattctcagccaaggacaatatgttcaagaaatccccagattgtt
cttcaggcagatgatggcgctggactttccactgctccttttgtatacattcttgggccg
atttcagataactcaccatttaccctgacaagaataaatgatacaagtggaatgttaaca
acactaaatacagatccccgcaatgttactgttcaaattcaaattataaacaaaaatggt
cagagttgttccgtacctgtaagtatcttactgcaaatttgccagtgtttagacaacaca
gacacctgcggaggtgtaggattagtaaaagacattcgaagtgttgcactgggccctgca
gccattggacttttgatcatgggatttttagcacttttactggcactgctattactgctg
ctctgctcgtgtggctctgcaacaaagaacacatttattcctgtagcagatgaatatgac
ggcgcataccgaccatgggggactgaaggagcaaaacctgaagatgtggatgtgaccaat
ttgcttgtaagttcgagtgctccagaatgttatgatgtgaactcacacaactacatttct
gggggaggactggaatcaacaacagcggcaacaacagcagcaacagctgcagcaggtggc
tttggaaatgcaggggttcattccagatcttttggcacaggactgggtacagccactgca
gtgggcactggggcaggactgattggaagtggtttgggaatacatggattttctggagaa
agcaatgccgcagggtcgtttactggaggaatgtcttcacactacagagatggtggcacc
attaacacagcttttgtggaaaactacattacagaaaaagcggaagcctacgccaatgag
gatgaaagtcgaccagcaaatgattgccttttgatttatgataatgaaggtgtgggaagc
cctactgggtctatcggatgctgcagttttattgacgaagacttggatgacagctatttg
gacaatttgggaccaaaatttaaaactctggcagaaatatgttctggtaaaaaacctgag
cctttgccgagtgctaaagaaccaaaagtagtcactagcattccaacagtagagcctgac
attagcttttcattaaatgatgtttcgaatttccgggaaatgtcacctgcccctgttact
agttctacctatgttactgaaagcttttcatcctccaacctgccacctgctaaacccatt
catgatcctagtaatgttgtagtaactgagacttacacaacatctggtcctgctttgaac
ccctctgcatttacttttgagccgcatgttcagcctaacatctatgtgacagagagagtg
gttgggtctacttcaggagtgagaggtgcatttcctgaaataaccgatggctccaatgtt
attgtgacggaaagaattatgcgccctgcttctggggtgcaagattttgtaaatatacaa
gacaacgcaaatgttgtacgacgggagagaatgatagcacctagcacttcaaggttgtct
gggtctttcaattttccagatttaagcgagggtcagaatgtggttgtcactgaaagagtg
atacagcccatctccaatgttcaaggaaatgtagatatacgctctgatctgatggatgga
cagaatgttcttgtaacagaaaggctgatacaaccagtatccaacatttcaagcggtaga
atcatccatcctgatcgagtcggtgcacaaaatgtaatagtgacagaaaaaacagttcga
tctgccccggctatacaaagccgtgtactaagccctgaacccttactcagtgttggatcc
acatcccccaatgtcactcgcagtagggttactacgtacagcaccgtccagtctggtcca
ggtgtccaaagccatgtgctaagcactgaaccctttctaacacaaacggttggatccact
tcccccagcgtcactcgcagtagagtcactaagtacagcaccatgcagtattccaaataa
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