Xenopus laevis (African clawed frog): 108718627
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Entry
108718627 CDS
T01010
Symbol
myo5b.L
Name
(RefSeq) unconventional myosin-Vb isoform X2
KO
K10357
myosin V
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108718627 (myo5b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108718627 (myo5b.L)
04131 Membrane trafficking [BR:
xla04131
]
108718627 (myo5b.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108718627 (myo5b.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108718627 (myo5b.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108718627 (myo5b.L)
mRNA cycle factors
P-body specific factors
108718627 (myo5b.L)
Membrane trafficking [BR:
xla04131
]
Others
Actin-binding proteins
Myosins
108718627 (myo5b.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108718627 (myo5b.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108718627 (myo5b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Ac76
AAA_22
Motif
Other DBs
NCBI-GeneID:
108718627
NCBI-ProteinID:
XP_018122444
Xenbase:
XB-GENE-17334615
UniProt:
A0A1L8I2T7
A0A974E443
LinkDB
All DBs
Position
1L:complement(222926038..223085871)
Genome browser
AA seq
1809 aa
AA seq
DB search
MSVYELYSQYTRVWIPDPDDVWRAAEIIKDYKEGDKSLKLKLEDESVIQHPVDPNQLPHL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFMESNHIYTYCGIVLVAINPYQQLPIYGED
VIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFAT
VGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTY
LLEKSRVVFQADMERNYHIFYQLCASASLPEFSELSLAEAEEFFYTNQGGDPVIDGVDDS
EDFEKTRQAFTLLGVKESHQMGIFKIVASILHLGNVAIQTEREGESCNLSKGDKHLNHFC
NLLGLEQDQMQHWLCHKKLVTTSETYVKTMSAEQAVNARNALAKHIYAQLFNWIVQHVNK
ALHTTIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQ
IPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQHFKKPR
MSNVAFIVVHFADQVEYQCDGFLEKNRDTVYEEQINILKASKYPLVADLFQNEKDAVPPT
PTGKGKISVRPAKPALKSANKEHKKTVGHQFRNSLQLLMETLNATTPHYVRCIKPNDYKE
SFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYHDFFNRYRVLMKKKDNSLGDKKLVC
KNVLENLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKYR
RMKKAAVTIQRYTRGHLARRLAQHFRMTKAAIRFQKQFRMIRVYRGFQKTRKAAITIQSY
TRGMFVRRAYRQLLEQHKATIIQKHLRGWLARKQFTKFRSAAVVIQCYYRRMKARRELKQ
LKIEARTAEHFKKLSVGMENKVVQLQRKLDEQNKEQKDLKEQLAVVTSTRAVEVEKLQKE
LEKQRQAQQDENQLSSLQEELEALREELAKSYNEKKIVEDTLMSEKEQLLQRVSELEEEN
SHLKEEKEELNNKIILRSEDEFTQSTVKENLQIKKDLEEERSRHQNLVKEYTRLEQRYDN
LKEEVNIIKQQMPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTINEVEEAGLEKAAMD
MSLFLKLQKRVRELELERKKLQSQLDKKEQQENKKSQVIDTANEVTADRDTDIAYNNLKR
QELESENKKLKNDLNETRKAIADGAVDGSSDEARIIMLLNQLKSAHEELEVRKEEVLMLR
TQIVKAAQHKEAERIMSSEASWPNSNKEMDEDDAIEAYHGVCETNRLLEAQLQAQIRQHD
EEVEILSSHIDSLKEELEKQQQVLLQALQLSPEAQVEFGLQQEITRLTNENLDLKELLEK
SEKNEKKLKKQLKIYMKKGQDSEDTVQTERKPELTRQATVQRIEKDFQGMLEYYKEEEPL
LVRNLIIDLKPEQMSSMVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINGIKKVLKKH
HSEFQITSLWLSNSSRLLHCLKQYSGDEGFMTSNSPKQNEHCLKNFDLTEYRQVLSDLSI
QIYQQMIKIAETHMQPMIVSAMLETESIQGLSGVKQTGYRKRTSSMADGDNSYSLEAVIR
QLNAFNSIMCDHGLDPEIIQQVFKQLFYLINAVTLNNLLLRKDVCSWSTGMQLRYNISQL
DEWLRGKNLHSSGAAQTMEPLIQAAQLLQLKKKTEEDAEAICSLCTALSTQQIVKILNLY
TPVNEFEERVTVSFIRIIQAQLQERSDSPQLLMDSKYMFPVLFPFNPSAIALDSVQIPPS
LKLDFLVKV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtatgaactttactcccagtacacccgggtgtggatacctgatccggatgat
gtctggagagcagcagaaattatcaaggactataaagaaggggataaaagtctgaagtta
aaactagaagatgagtctgtcatacagcaccccgtggatccaaaccagttaccgcatctc
cgcaacccggatatcctggtgggagagaatgacctgacggctctgagttatcttcatgaa
ccggccgtactccataacctaaaagtccgtttcatggaatcaaatcacatttacacttat
tgtggaattgtacttgttgccataaacccataccagcagttgccaatctacggagaagat
gttatctacgcatacagcggccaaaatatgggggacatggaccctcacatatttgcagtg
gctgaagaggcttataagcagatggccagggatgaaaagaaccagtccatcattgtaagt
ggagagtccggagcagggaaaaccgtatctgccaaatatgccatgcgctactttgctaca
gtcggcggatcagcaagtgaaactaatgtggaagagaaagtattggcttctagtcccatc
atggaggctattgggaatgccaaaacaacccggaatgacaacagcagccgatttgggaag
tacattcagattgggtttgacaaacgatatcatatcattggtgccaacatgaggacttac
cttctagagaaatcgcgtgttgttttccaggctgatatggaaaggaattaccatattttc
taccaactttgtgcctctgccagcttgccggagttctctgagctgtcattagctgaagcc
gaggagtttttttacactaaccagggaggtgatccggttattgatggagtggatgactct
gaagactttgagaagacgagacaggctttcacacttctgggagtgaaggagtctcatcaa
atgggcatctttaagattgtggcttccattctgcatcttggaaatgttgcgatccagacg
gagcgggaaggggaatcgtgtaacctgtcgaaaggggataagcacctgaatcatttctgc
aatttgctggggctggagcaagaccaaatgcaacactggctgtgccacaagaaactcgtc
accacctccgaaacctacgtcaaaaccatgtccgccgaacaggccgtaaatgcgaggaac
gccttggccaagcacatctacgctcagctcttcaattggattgtgcaacacgtgaacaag
gccctgcacaccaccattaagcagcactcctttattggggtcctcgacatatacgggttt
gaaacctttgaaataaacagctttgagcagttctgcatcaattacgccaacgagaagctg
caacagcagtttaactcgcacgtctttaaactggaacaagaagaatacatgaaagagcag
attccatggaccctgatagacttctatgacaatcaaccttgtatcgatttgattgaggca
aagttgggcattttggatcttctagatgaagagtgcaaggtccccaaaggaactgaccag
aactgggcacagaagttatatgaccggcatggaagcagccaacacttcaagaaacccaga
atgtctaatgtggcttttattgtggtgcattttgctgaccaggtggagtatcaatgcgac
ggatttctggagaagaacagagacactgtgtatgaggaacagattaacattctgaaggcc
tcaaagtatccactggttgctgacctgtttcaaaatgaaaaagacgctgttcctcctact
ccgactgggaagggtaaaatcagtgttcgtcctgcaaaacctgctctgaaaagtgctaat
aaagaacataagaaaactgtgggacatcagttccggaactccctgcagctgctgatggaa
accttgaatgccacaactccccactatgtgcgctgcattaagcccaacgactataaggag
tctttcagctttgatccaaagagagccgtgcagcagctgagagcatgtggcgtgctggag
actatccggattagtgctgccggctttccatccaggtggacctatcatgacttcttcaac
aggtaccgagtcctaatgaaaaagaaggacaattctctgggagacaagaagctggtctgt
aagaatgtcttagagaaccttatcaaggatcctgacaagttccagtttggacggacaaag
atttttttccgggctggccaagtggcctacttagagaaactgcgcgcagacaagttccgt
gccgctaccattatgattcagaagactgtacgcggctggcttcaaagggtgaaatacaga
aggatgaagaaggctgcagttaccatccagagatatacacgtgggcaccttgcccggagg
ttggctcagcacttcaggatgacgaaggctgccatccgcttccagaagcaattccgaatg
atccgcgtgtatcgtggctttcagaagactcgcaaggcagctatcactatccagtcctac
acccggggaatgtttgtcaggagagcttatcggcagcttctggagcagcacaaagccacc
atcatccagaaacacttgcgtggttggttggcccgcaaacagtttaccaagttccgcagc
gcggccgttgttattcagtgttactaccgccgcatgaaagcccgacgggagctcaaacag
ttgaagatcgaagcccgaacagcagagcactttaagaagctcagcgtgggcatggagaac
aaggtggtccagctgcagaggaagcttgatgagcagaacaaagagcagaaagacctgaag
gagcaactggcagttgtgacttctactcgtgcagtcgaggttgagaaacttcagaaggaa
ctcgagaagcaaaggcaggctcagcaggacgagaaccaactcagcagcttgcaggaggaa
ctggaggctctgagagaagaactggccaaatcgtacaatgagaagaagatcgtagaagac
actctcatgagtgagaaagagcagctgctgcagcgcgtctctgagctggaagaggagaat
tctcatttgaaagaagaaaaagaggaactcaataataaaatcattctgcgatctgaagat
gaatttacccaaagtacagtcaaggagaacctgcagattaagaaggatcttgaggaggaa
aggtcccggcaccagaatctggtaaaggaatatacaaggttggagcagagatatgacaac
ctgaaggaggaggtgaacattattaagcaacaaatgccagggcacaggaggaatccgtcc
aatcagagcagcttagaatctgactccaattacccctcaatatctacttctgagatcggg
gacacagaggataccatcaatgaggtggaggaggccgggctggaaaaggctgccatggac
atgtctctgttcctgaagctgcagaagagagtgagggaacttgagcttgagaggaagaag
ctgcagagccaactggacaaaaaagaacagcaagaaaataaaaaatcacaggttatagac
acagccaatgaggtgactgcagaccgtgacactgacattgcctacaacaatctcaagagg
caagaacttgagtctgaaaacaagaagcttaaaaatgacttgaatgagacgaggaaggca
atagcagatggagcagtagatggctcaagcgacgaggccaggattatcatgttactcaac
caactgaagtcggcccacgaggagctggaggtgcggaaggaagaagtgctcatgctcaga
acccagattgtaaaggccgctcaacataaagaggcagagaggattatgagctcagaagcc
agttggccaaacagcaacaaggaaatggatgaagacgatgccattgaagcctatcatgga
gtctgtgagacaaacaggcttctggaggctcagcttcaggcacaaatcaggcagcacgat
gaggaggtggagatactgagctctcacattgactccctaaaggaagagttggagaagcag
cagcaggttctacttcaagctcttcagctttccccagaggctcaggtggagtttgggctt
cagcaagaaattacccgtctcactaatgagaacctggaccttaaggaattactggagaaa
tcagaaaagaacgagaagaaattgaagaaacaactaaagatttacatgaagaaagggcag
gattctgaagacacagtgcagacagagaggaaacctgagctcacccgtcaggcgacagta
cagcgaatcgagaaggacttccagggaatgttggagtactacaaggaggaagagccactg
cttgtaagaaatctcattatagacttgaagcctgagcagatgtcttccatggttccttgt
ctgcctgcgtatatcctcttcatgtgcatcagacacgcagactacatcaatgatgatcag
aaagtccactccctcctcacttccaccatcaatggaataaagaaggtgctaaagaagcat
cacagtgaattccagattacatctttgtggctgtccaactccagccgtctgctccattgc
ctgaaacagtacagtggagacgagggcttcatgaccagcaatagtcccaagcagaacgag
cattgcctgaagaacttcgacctcaccgagtaccgccaggttctcagcgacttgtccatc
cagatctaccagcagatgataaagattgcggaaacacatatgcagccaatgatcgtgtct
gctatgttggaaacagaaagcatccaaggcctatctggggtaaagcagacggggtacaga
aagaggacctccagtatggcggatggggataattcctacagcctagaagccgtcattcgc
cagctgaacgcattcaatagcatcatgtgtgaccatggcctggatcccgagatcattcag
caagtcttcaagcagctcttttacttgattaacgccgtcaccctgaataatctgctgctg
aggaaggacgtttgctcgtggagcactggaatgcaactaaggtataacatcagtcagttg
gatgaatggctgcgggggaagaacttgcattcgagtggcgctgctcagactatggagccg
ctgatccaggctgcacagttgctgcaactcaagaagaagacggaggaggatgcggaggcc
atatgttctttatgcacagccctgagcacccagcagattgtgaagatcctgaatctctat
acaccagtgaatgagtttgaagagcgtgtgaccgtgtcctttatcagaatcattcaggct
cagttgcaagagcggagcgattctcctcagctgctgatggattccaaatacatgttccca
gtcctgttccctttcaacccctcggccatcgctttggactccgttcagatccctccttcc
ctcaagctggatttcctcgtgaaagtctga
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integrated database retrieval system
