Xenopus laevis (African clawed frog): 108718724
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Entry
108718724 CDS
T01010
Symbol
loxhd1.L
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
108718724 (loxhd1.L)
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108718724 (loxhd1.L)
Cilium and associated proteins [BR:
xla03037
]
Other cilia and associated proteins
Stereociliary proteins
108718724 (loxhd1.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Other domain-containing proteins
Others
108718724 (loxhd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
108718724
NCBI-ProteinID:
XP_018122604
Xenbase:
XB-GENE-17332055
UniProt:
A0A1L8I2Y6
A0A974E3C8
LinkDB
All DBs
Position
1L:224448774..224583290
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AA seq
2496 aa
AA seq
DB search
MPSQMQYYNSSPSVTGILQPITAPGSFGQMRPRDAYPSTTAPRIRPVTGFQFRDVSPPRG
KPVWNDGYKSEGWKNSLRRYKVSLNHRPVESVLSKRAPYAGRTLSANSGGYQYRNGNTDT
LPTYNSMNDPHLYDFYAKKFGLQVNPQPPSMKRTKSAPTRRSVLRSGSLSGKKVLYKVVV
KTGDKKQAGTNARVFLQMKGSKGKLSKTQLYKASGMDSSDKSEAFSFKKGSTQSFKVYGP
EIGDIKTITIEHDGLEQQHAWFLEEVFVTNTNRDKSWYFPCRRWFSLYHTDCQLSRTLSP
EIKPVSHELDGKKGDHTVYEVVTVTGDVRGAGTDANVFVTLFGEFGITPKIHLTSKSRTA
FERSKTDVFRIKTNNVGPLKKIRIEHDNTGLNAGWYLDRVIITDMNRPHLRFYFPCNNWL
SKEEGDGLYVRDLLGSLNPMDVPKMNKYVARVFTGASNGSGTDADVFLNIFGENGDTGER
RLDNDKNNFEKGTEDKFTIDAPNLGKIRKITIGHNNKGGSAGWFLEKVIIEDLGNKTVYD
FPCSRWFAIDEDDGKIQRDLLVGGSEATGIVYNVAIMTGDIRGAGTDSKIHIILHGEKGM
KNSGKIFLEGGEFERGRIDIFNIEIAALLSPLSRVTIGHDGHGVGAGWYCEKVIVYCPFT
GIEQTFPCGYWLDEDEGDGLIERELYEMLSLRQKRQKKHPWSLWIWTSDIKNAGTDANIL
LQVYGEKGKSDEMKLDNNSDNFEAGQVDRFMIELPDLGALYKIRIWHEKRTAFSGWHLNK
VTLLKTLTKEKYTFKCGRWLDLNEDDREIVRELAAEGPLVDSVLPVVKYRVTVYTGTVSG
SGTDANVFICLFGDFGDTGERFLIDCKNNMNKFEKGNADDFIIEAVTLKQVKRVRIGHDG
KGGGCGWYLDKVVVREDGKPETDAVEFPCNRWFDRNEDDGHIIRELVPAGDSQNLRSISY
HFQIKTGDVSGASSDSRVFVKLYGEKGDTNKQFLLVSDNNLGDNFERGRVDNFTINTIDI
GKINKLLIGHDNVGIRAGWFLANVVVQVPSHGKQYMFPVNRWLCKDECDGKVEVEVYASE
VKMIEKLVNYEVIITTGNVRGAGTNANVFMQLYGEQGKTEEMFLRSRSNDFERGAVEIFK
IEAVEVGKIRKLRIGHDGKGFGDGWYLESVEIKRVGMQMMSGEKTDKKKKTNKKKKSSKE
DEEELQPQEVVESYKFECQRWLARGEEDGELVVELLPLETSELEENSYEIHVFTGTVWGA
GTDANVYVTMYGELGDTGERQLKKANHLNKFERGQEDIFTIKAVDLGELKKLRIRHDNKG
ANAGWFLDRVEIVDEKDDTKYFFPCQRWLAVDEDDGQIARQLVPVNEAFMKKEDEGQDQS
LATLGLEQKAKSTTYTVSIKTGDKKNSGTDANVFLILYGEKDDTGFMNLKASKTNKNKFE
RGQIDVFTVEAVDIGTLTKLKIGHDNKGTSAGWFLDWVEIDAPSLGQRVKFPCGRWLDKS
EDDGTIERYLFPSELQTEQYVPFVPYEITAYTSDIFGAGTDADVFIVLYGRDGVCTQQKS
LCVNKRERRLYFERNSVDQFIVELEDVGDIIEKIRIGHTGKGLNSGWHLDRVEIRRLLPN
GKGSQTITFPCERWLAKSEDDGETVRELVPSDIFTEKLMKDGTLKQIEMEVEDPLETHTY
SISVFTGDIYGSGTDANVFITVYGDLGDTGERKLSKSETNSNKFERGQVDKFNIEAVDLG
TIYKIKIRHDNSMLNPDWYLERVEILNEVTEETYMFICERWLSTKKEDKKIERVLYEKEY
DGERLSLGSSSKSFWGSSISLRSQDNNANVKGKNSLDGSHQDATLIPYHITITTGLDRVG
GTESRAYVIIMGPQKIRTERLWLDLPKEKKGFAPGSVEKFSVVGLDVGEIKKMELGHDGV
TPESCWLVDEIQLTVPNKGLMYTFVCKCWFAKDRGDGLTARVFDMLDATAITIGHKILYE
VTVVTGDVPNGGTDANIYITCFGESGSSEEMQLPKGDDRFERGQRDTFVMEIADIAPLKK
MRMRIDGKGSRPEWYFEQITLKNLTTEEETVFMYGDWLSKTNGERKTLSCEMAATIDGEE
MVDTTTYIIQVKTSDVSGAGTDANVFLIIFGENGDTGTLALKQSNNSNKFERSQSDVFRF
PDMLSLGDLCKVRVWHDNSGIGPGWHLEFIDIKDETMNKSFRFQCDRWLAKNADDHQIIR
ELACANNDILDLKERTSYEIVTVTSDRDDAETKDNVWIVLEGKKGRSKEFLLENSSKKRR
FARDATDKFKFSSKNVGDIAAICVGHCPKDGRKFSPKPDLHWHVKEIIVTETELGNKYIF
NCNAKVPLRSKRDDYKVFECAKAVESFASRARSLVPVKYEVIVVTGFEKGAGTDANVVIT
MYGSNGDSGRHTLKQKMRNLFERGKTNRFFIETLDLGEMKKVRMEHDNSGINPGWLLERV
EITNTATGVTTIFPCGKWLDKKRGGGETWRDLFPKY
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccagatgcagtattacaactcgtccccgtcagtcacgggcatcctccagcct
atcactgcacccggttcttttgggcagatgagaccaagggacgcctatcccagtaccact
gccccccggatccgaccagtcactgggtttcagttccgagatgtctctcctccccgcggg
aagcccgtgtggaatgatggatacaagtcagagggctggaaaaactccttgcgcagatat
aaagtcagcctgaaccataggcccgtggagtctgtgctcagcaagcgtgctccgtatgca
ggaagaacactaagtgccaacagtggtgggtatcagtacagaaacgggaacacggacact
ttgccaacgtataactctatgaacgaccctcatttatatgatttctatgccaagaagttt
ggattgcaggtgaacccacagccaccctccatgaaacggaccaagagtgccccaaccagg
agatctgtgctccgctctggttctctctcagggaaaaaagttctctacaaggtcgtggtg
aagactggagacaagaagcaggccggaactaatgccagagtatttctccagatgaaggga
tctaaaggaaaactcagtaagacccaactgtataaagcatccggaatggactcgtcagac
aaatcagaagcattttcattcaaaaagggctctacccaatcattcaaagtgtacggcccc
gaaattggagacatcaaaactatcacaattgagcatgatggcctggagcagcagcacgca
tggttcttggaagaagtgtttgtgaccaataccaatagggacaaatcctggtacttccca
tgccgcagatggttttccctgtaccacacagactgtcagctgagccgcactttgtccccc
gagattaaacccgtatctcatgaactcgatggcaaaaaaggggaccacactgtatacgag
gttgtcacggttacaggagacgtgcggggggccggcaccgacgccaatgtctttgtcact
cttttcggagaattcgggatcactcccaagattcacctcaccagcaagagtaggacggct
ttcgaaaggtccaagactgatgtgttccgaatcaaaaccaataacgttggaccactcaag
aagatcagaattgaacacgataacacaggactgaacgcaggatggtatctggatcgggtc
atcataacggatatgaacaggccccatcttcgcttctacttcccgtgcaacaactggctg
agcaaagaagaaggagatggactttatgtcagggatctgctaggcagtctcaatcctatg
gatgtgcccaaaatgaacaaatatgttgcaagagtctttacgggagcatccaatggcagt
gggacggatgcagatgttttccttaatatttttggggagaatggagacacgggggaacgg
agacttgacaatgataaaaacaactttgagaagggcacagaagacaaatttactatcgat
gcaccaaatctggggaaaataaggaaaatcactattggtcacaataacaaaggaggctcg
gctggctggtttctggagaaggttattattgaagatctcggaaacaaaacagtgtatgac
ttcccttgctctcgctggttcgctatagatgaagatgatggaaagattcagcgagatctg
ctcgtgggagggagtgaagcaacaggcattgtgtacaatgttgcaattatgactggagat
atccgaggtgccggaacagactccaagatccacatcatcctacatggagagaaaggtatg
aagaacagcggcaagatcttcttggaaggaggggagttcgagagaggcaggatagacatt
ttcaacattgaaatcgcagccttactgagcccgcttagcagagtgacaattgggcacgat
ggacatggcgtgggggctggatggtactgtgagaaggttatagtttactgcccattcact
ggcattgagcagacgtttccatgtggctactggttggacgaagatgaaggagatggccta
atagagagagaactctatgaaatgttgtccttgcgccagaagaggcagaagaaacatccg
tggtcactttggatatggacaagtgatattaaaaatgccggaaccgatgccaacatcctt
cttcaggtctatggagagaaaggaaagtctgatgaaatgaagctggacaataactctgac
aactttgaagccggacaggttgacaggttcatgattgaacttcctgatctgggagctctg
tacaaaatccgaatttggcatgagaagagaacggccttttctggctggcatttaaataag
gtaaccctgctgaaaacactcaccaaagagaaatatacctttaaatgtgggcgctggttg
gacctgaatgaagacgatcgtgaaattgtaagagagcttgcagcagaggggccgctcgta
gactctgtcctgcccgtggtaaagtatcgtgtgacggtttacactggtacagtgagcggc
agtggcactgatgccaatgtatttatctgcctcttcggtgattttggcgacacaggagag
cgttttctcattgactgcaaaaacaacatgaataagtttgagaaaggcaatgctgatgac
ttcattattgaggcggtgactctgaagcaggtgaaaagagtgcggatcggacatgatggg
aaaggaggaggctgtgggtggtatttggacaaagttgtagtgagagaagatgggaaacca
gagacggacgctgtcgaatttccatgcaacaggtggtttgacagaaacgaggatgatggg
cacatcattagggagttggttcctgctggagactcacagaatctgaggagtatcagctat
cactttcagattaaaacaggcgacgtcagtggggccagctcggattcccgggtctttgtc
aaactgtacggagagaagggggacaccaacaaacagttccttctggtttctgataacaac
ttgggggataactttgaaaggggccgagtggataatttcaccataaataccattgatata
ggcaagatcaataagctgttgattgggcacgacaatgtggggattcgagcgggttggttc
ttggccaatgtggtggttcaggtcccctcccatgggaagcagtacatgtttcctgtgaac
cgctggctgtgcaaggacgagtgtgacgggaaggtggaggtggaagtgtacgctagcgag
gtgaaaatgatagagaaattggtaaattatgaagttataataaccaccggcaatgtgcgg
ggagctggaaccaacgccaacgtcttcatgcaactctatggggaacaggggaagactgaa
gagatgtttttgaggagtcgttctaatgactttgaaagaggagctgtcgaaatatttaag
attgaggccgtggaagtggggaagatccgcaagctcaggattggccacgatggcaagggg
tttggagacggctggtatttggagagtgttgagatcaagcgagttggaatgcaaatgatg
tctggggagaagacggacaagaagaagaaaaccaacaagaagaagaaatccagtaaagag
gatgaggaggagcttcagcctcaagaagtggtggagtcctacaagtttgagtgccagcgc
tggttggccagaggggaagaagatggagagctggtggtggagcttctgcctctggaaact
tcagaactagaagagaacagctatgagatccatgtatttactggcaccgtttggggagcc
ggaacagatgcaaatgtttatgtcaccatgtacggagaattaggagacacgggagaacgt
cagttaaagaaagccaaccatctgaacaaatttgagagaggacaggaggatatattcact
ataaaagctgttgatttgggagagcttaagaaactgagaatccgccatgacaacaaggga
gccaacgcgggctggttccttgacagagtggaaattgtggatgagaaggatgacacaaag
tatttcttcccatgccaacggtggctcgctgtcgatgaagacgatggacagattgccagg
cagctggtacctgtgaatgaggcctttatgaagaaagaagacgaagggcaagaccaatca
cttgccacactgggtttggaacagaaagctaaatcgacaacttacacagtaagcattaag
accggagacaagaagaattctgggacagatgccaacgtgttcttaatcctgtatggagag
aaagatgatacagggttcatgaacctcaaagcttccaagaccaacaagaataagtttgag
cgaggccaaattgatgtgtttacagtggaggccgtggatatcgggactctgaccaaacta
aaaattgggcacgataacaaaggtacctccgctggttggttcctggactgggtagagatt
gatgccccatcacttggtcagcgggttaagttcccatgtggtcgctggttggataaaagt
gaggatgacggaaccattgaaagatatctgtttccttccgaactgcaaacggagcagtat
gttccatttgtgccatacgagatcacagcctacaccagtgatatatttggggctgggacg
gacgcagatgtcttcattgttctgtacggcagagacggggtctgtactcagcagaaatcc
ctgtgtgtgaacaagagagagcggaggttgtactttgagaggaactcggtggatcagttc
attgtagagttagaagacgttggggatatcattgaaaagattcgcattgggcacactggt
aaaggtctcaactcaggatggcatttagacagagtggaaattcgaagactgctaccaaat
ggaaagggctcccagaccataacctttccatgtgagcggtggcttgccaaatccgaggac
gacggagagacagtgagagaactagtgccatcagatatcttcacagagaaactcatgaaa
gatggaaccttgaaacagattgagatggaagtagaagaccctctggaaacccacacgtac
agcatatctgtcttcactggcgacatctatggatcgggaacggacgccaacgttttcatc
acagtttatggagatttgggagacacgggggagaggaaactgagcaagtcagagaccaac
tccaacaagttcgagagggggcaggtggataaattcaatatagaagcagtggatcttggc
accatctataagattaagattcggcacgataactctatgttgaaccctgactggtacctg
gagagggtagagatccttaatgaagtcacagaagagacgtatatgttcatctgtgagcga
tggctctccaccaagaaagaagacaagaagattgaacgagtgttgtatgagaaggagtat
gatggggagcgtcttagcttgggaagctcatccaaaagcttctggggatcatccatcagt
ctgagaagtcaggataacaatgccaatgtaaagggcaagaacagcctagatggttctcac
caagacgcaacattgatcccatatcatatcactatcaccactggccttgaccgagttgga
gggacagaaagtcgcgcttatgtcatcatcatggggcctcagaagataaggacagaacga
ctttggctggacctgcccaaagagaagaaaggttttgcgccagggtcagtggagaagttc
tctgtcgtgggactggatgttggagagattaaaaagatggagttgggccacgatggggtt
accccagaaagctgctggcttgtggatgagatccaactaacagtgcctaacaaaggactc
atgtatacctttgtctgtaaatgctggtttgccaaagatagaggagatggtctaactgca
cgggtcttcgatatgctggatgcaactgccatcactattggccataagattctctatgag
gttactgttgtcacgggagatgtaccaaacgggggtactgatgccaatatttatataacc
tgctttggagaaagtgggagctcagaggaaatgcagctgccaaaaggagatgacaggttt
gagagaggccagcgtgacacttttgtcatggagatcgctgatatcgccccactgaagaag
atgagaatgcgtatagatgggaagggcagccgtcctgagtggtatttcgaacagatcacc
ttgaagaacctgaccaccgaagaggagacagtgttcatgtatggggactggttgtccaag
accaatggcgagaggaagactctgtcctgtgaaatggcagccacaatcgatggtgaagaa
atggtagacactacgacgtacattatacaagtcaaaaccagcgacgtgtcaggagccggt
actgatgccaacgtgttcctgataatcttcggagagaacggagacaccggcactctggca
ttgaagcagtccaacaattccaacaagtttgaaaggagccagagcgatgttttcagattc
ccagatatgttgagcctcggagatctgtgcaaagtgcgggtctggcacgataactcaggt
attggccccggctggcacctggaatttatagatataaaggacgagaccatgaacaagagt
ttccgcttccagtgtgaccgatggctcgccaagaacgcggacgatcaccagatcataagg
gagctcgcctgtgccaacaacgatatcttggatctgaaagagcgcacatcttatgagatt
gtgacggtgacgagcgacagggacgatgcagagaccaaagacaatgtctggatcgtcttg
gagggcaaaaaagggaggtcaaaagaatttctattggagaactcttccaaaaagcggagg
tttgcacgggatgcaacggataaatttaagttttcctccaagaacgtgggtgacattgct
gccatctgcgttggccattgccccaaggatggaaggaagttttctccaaagccagattta
cactggcacgtcaaggagatcatcgtgaccgagactgaacttggaaacaagtatatattt
aactgcaatgccaaggtgccactccgcagcaagagggacgattacaaagtgtttgagtgt
gccaaggcagtcgagagctttgccagccgggcccgcagtttggtaccagtcaaatacgaa
gtcatcgtggtcaccggttttgaaaagggggcgggaacagatgccaatgtggtcatcact
atgtacggctccaatggagattccgggcggcataccttaaagcagaagatgcggaacctc
tttgagcgcgggaaaaccaaccgcttcttcatagagaccctggaccttggggaaatgaag
aaagtccgcatggagcacgataacagcggtatcaaccccgggtggctgctggagagggtg
gagatcaccaacactgcaacgggggtcaccaccatattcccatgtggaaaatggctcgac
aagaagaggggaggaggggagacctggagggatctgttcccaaaatactaa
DBGET
integrated database retrieval system
