Xenopus laevis (African clawed frog): 108718845
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Entry
108718845 CDS
T01010
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108718845
09142 Cell motility
04814 Motor proteins
108718845
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108718845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108718845
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
108718845
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
108718845
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
108718845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
Dynein_IC2
WD40_Prp19
Beta-prop_EML
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
108718845
NCBI-ProteinID:
XP_041421836
UniProt:
A0A8J1KX17
LinkDB
All DBs
Position
6L:33200120..33435052
Genome browser
AA seq
734 aa
AA seq
DB search
MPPKKRVTKEKKDLKKPESVASAVTSSSQDKSAKSHEKQGRVVPTSKVQSRRLKEQVTEP
VRVSQPTAAVSEAVVPERPQEPTMSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEA
ELQHKAEPIAEDSDLDRKRRETEALLQSIGISPEPPLVQPFLTLDTCYFHYLVPTPMSPS
SKSLSTPSEAGSQDSVDGTLMGRNLQSGLLGTLQWDTDPSVLQLHSDSELGRRLIKLGVS
KVTQVDFLPREVVSYSKETQTPVTTHQTEAVEEEDEEMVDLKTERDSEYENQEEKQDSKE
VPPRELTEEEKQQVTHSEEFLIFFDRTIRVIERALAEDSNIFFDYSGRDLEDKEGDIQAG
ANLSFNRQFYDEHWSKHRVVTCLDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFRK
TTPEYIFHCQSSVMSVCFARFHPNLVIGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTH
PIYCVNVVGTQNAHNLITVSTDGKLCSWSLDMLSAPQESMELVYNKSKPVAVTGMAFPTG
DVNNFVVGSEEGTVYTACRHGSKAGISEVFDGHQGPVTGINCHNAVGPIDFSHLFLTSSF
DWTVKLWTTKHNKPLYSFEDNADYVYDVTWSPVHPALFACVDGMGRLDLWNLNNDTEVPT
ASTAVEGASALNRVRWAQSGKEVAVGDSEGRVWIYDVGEFAIPHNDEWSRFARTLVEIRA
NRGEGEEEAVDLST
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaaaaagagagtcaccaaagagaaaaaagatctgaagaagccagagagtgtg
gcatcagcagtaactagcagcagccaggataaatcagccaaatctcacgagaaacaaggt
cgagttgtgccaacatcaaaggttcaaagtcgacgccttaaagagcaagtgacagaacca
gtacgcgtttcgcagcccactgctgctgtttctgaggccgtagtgcccgaaagacctcag
gaaccaacaatgtctgacaaaagtgatttgaaagctgaacttgaacgcaaaaagcagcgt
ttggcacaaatcagagaggaaaagaaacgaaaggaggaggaaagaaaaaagaaagaggct
gaactgcagcacaaagctgaacctattgcagaagatagtgatctggaccggaaaagaaga
gagactgaggcattactgcagagtattggcatatctccagaaccaccactagtgcagcca
tttttaacattggatacctgttattttcattatttagtcccaacccctatgtctccctct
tcgaaatcactgagcaccccaagcgaggctggcagtcaggactcggtagatggcacccta
atgggacggaatctgcagagtggcctacttgggactctgcagtgggacaccgatccttca
gtactgcagcttcactcggactcagaactcggaagaagacttattaagcttggagtatct
aaagtcactcaagtggatttcttgcctcgggaagtagtgtcgtactcaaaggagacacaa
actccagtgacaacccaccagactgaagcagtggaagaagaggatgaggaaatggtggat
cttaaaacagaacgtgattctgaatatgaaaatcaagaggagaagcaagactccaaagaa
gtacctcccagagaactgacggaggaggagaaacaacaagttacccattcagaagaattc
ctgatcttttttgaccgtaccattcgtgtgattgagcgggcgctggcagaggactcaaat
atattctttgattacagtggaagagacctggaggataaagagggggacattcaggctgga
gccaatctttcatttaatcggcaattttatgacgagcattggtcaaagcatcgtgtggtt
acttgcctcgactggtctcttcagtacccagagctgatggttgcttcctacaataataat
gaagatgcccctcatgagcccgatggagttgcattagtgtggaacatgaaattcaggaag
accactccagagtatatattccattgtcagtcctctgtgatgtccgtgtgctttgcgcga
tttcatccgaaccttgtcattggtggtacctactcagggcagattgttctttgggataac
aggagccacaggagaacccccgttcaaaggacaccgctgtctgccgcagctcacactcac
cccatctactgtgttaatgtagttggaacacaaaatgcccacaaccttatcactgtttca
accgatgggaaattgtgctcctggagtttggatatgctctcagctccgcaggaaagcatg
gaacttgtctacaataaatccaaacctgtagctgtgactgggatggcttttccaactgga
gatgttaacaattttgttgttggaagtgaggaaggcacagtttatacagcctgcagacat
ggaagcaaagccggcatcagtgaagtctttgatggtcaccaggggcctgtcaccggaatc
aattgccacaatgcagtgggacctatagacttctcccatcttttccttacatcctcattt
gactggacagtcaaactctggacaacaaagcacaacaagccgctctactcctttgaagac
aatgcagactatgtctatgacgtcacgtggtcacccgtgcatcccgcgctcttcgcctgt
gtggatgggatggggcgcttggatctctggaacctcaataatgacacggaggttccgacg
gcaagtacggctgtggaaggagcctctgcgctgaatcgtgttcgctgggctcagagcggc
aaagaggtggcagttggggattcagaaggtcgagtctggatctacgatgtgggagagttt
gctattccacataacgatgagtggagccgatttgcccgcacattagtcgagatccgagcc
aaccgaggagaaggagaggaagaggctgtggatctgtccacctga
DBGET
integrated database retrieval system
