Xenopus laevis (African clawed frog): 108718874
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Entry
108718874 CDS
T01010
Symbol
snx13.L
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
108718874 (snx13.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108718874 (snx13.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
COX5A
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
108718874
NCBI-ProteinID:
XP_018122869
Xenbase:
XB-GENE-17341091
UniProt:
A0A1L8FW42
A0A974CLU4
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Position
6L:complement(38481967..38573076)
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AA seq
1019 aa
AA seq
DB search
MEPGSGLISQKAPSRLCYDLLCDSWGQAETHISRRELEKPPPEVDSAQEPCLDERNRKED
VASYILKASLSIWGWGSLGVVLFLIKFGPFAIFYFAFYILCFVGGGFVVTILFGKTSSER
HLERCEHSFLPSTSTGIPKCLEEIKLEPRTIKIDRRITGASMIDEPLQQVIQFSLRDYVQ
YWYYTLSEDESFLLEIRQTLQNALVQFSTRSKEIDWQPYFTTRLVDDFATHLRVFRKAQQ
KMAEKEDQKKDKTEDFIDTFFEVEVEMEKCVCRDLVCTSSKDEEGCLKDLCEVLLYLLLP
PGDFQNKIMRYCVREILSRGILLPLINQLSDPDYINQYIIWMIHDFSCNYEAFMNVIKLS
DNIGELEAVRDKAADELQYLRSLDTVGDDINTIKNQINSLLFVKKACETRIQRLQSGKEI
DTLKLAANYGKLCTVPLDKILIDNVALQFFLDFMQQTGGQAHLFFWLTVEGYRVTAQQQL
EVLHSRQRDGNHQTNQTKGLLRAAAVGVYEQYLSEKASPRVHIDDYLLGKLEETLNSEDP
TPEIFDDIQRKVYDMMLRHERFYPSFRHNTLYIRMLAELDMLKEPSFKGSDDGDGEFFNG
SPNGSIHSSLDDLTSSDELLQINAFISDTGVCNEHGKTYALYAITVQRRSLDAVEDMWKT
YRRYSDFHDFHMRITEQFESLASLLKLPGKKTFNNMDKEFLEKRRNDLNAYLQLLLNPEI
VKACPALAHYVFDFLENKAYSKGKGDFARKMDTFVIPLRNSMRNVSNVVKSIPDSLAEGM
NKMSDNMGKMSEKIGQDIKHSFFKAPILVPKTDAFPELYRVSAQLDDNVDDNIPLRVMLL
LMDDVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDHVQYMTSPDQVADYVKQFR
ESFWPNGILAESALRRDRSIRMRTRVAAKTNLLEIMPDELKHIIGAETTRKGILRVFEMF
QYNQLNRRLVYVFIEGFLETLFPQYKFRELFYKLHSRSERMQKYRQRAQPSQAPSLQKR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggctccggtctgatcagccaaaaggccccgtcccggctctgttatgatctg
ctctgtgacagctggggacaggctgagactcacatcagccggagggaactggagaagccc
ccaccagaggtagactcagctcaggagccttgtcttgatgaaaggaatagaaaagaggat
gttgccagctacattttaaaggctagtctttccatatggggatggggaagtcttggcgtt
gtgctgttcctgatcaagtttggaccttttgctatattctactttgccttttacatacta
tgctttgttggagggggttttgtagtgactatcctttttggcaaaacaagttcagaacga
cacttagaaaggtgtgagcactcttttctaccatcaacatctactggcattcccaagtgt
ttggaagaaattaaacttgaacctagaaccatcaagattgacagaagaataacaggtgcc
agtatgattgatgagcccctgcagcaggttatacaattttcattgagggattatgtccag
tactggtattacacactaagtgaggatgaatcttttctccttgaaatcaggcaaactctc
cagaatgcgcttgtacagttttctactaggtcaaaagaaattgactggcagccttatttt
accacccgtttagttgatgactttgccactcatcttcgagtgttcagaaaagcgcaacaa
aaaatggcagaaaaggaagatcaaaagaaagataaaactgaagattttatagatactttt
ttcgaggttgaagttgagatggaaaaatgtgtctgccgtgaccttgtctgcacttcatcc
aaagacgaggaagggtgcctaaaggatttatgtgaagttttactatatttattgctacct
cctggagacttccagaataaaatcatgcgatattgtgtgagggaaatcctttcacgagga
attcttcttcctttaataaaccagctcagtgatcctgattatattaatcaatatatcatt
tggatgattcatgatttcagttgcaactacgaggcctttatgaatgttattaaattaagt
gacaatataggagaattggaagctgtgagagacaaagctgcagacgaactgcagtatctt
cgttctttggatactgttggagatgatatcaacactataaaaaatcagataaacagctta
ctctttgtaaagaaagcatgtgaaacaagaatacagagattgcagtcggggaaagaaatt
gacactttgaagttggctgcaaactatggaaaactttgcacagtcccattggacaaaatt
cttatagacaatgttgcactacagttttttctggattttatgcagcagaccggagggcaa
gcacatctcttcttctggctgacggtggaaggataccgagtcacagcgcagcagcaactt
gaggttctgcacagccgacaaagggacggaaaccatcaaaccaaccaaacaaaaggtttg
ctacgagctgcagcggttggagtgtatgaacagtatttatctgagaaggcatcacctaga
gtccatattgatgactacttattaggaaagcttgaagagaccttgaacagcgaagatcca
acacctgaaatttttgatgacatacagagaaaggtttacgacatgatgctgcgccatgaa
agattttacccatcgttccgtcacaacactctctatatccgaatgctggcagagctcgac
atgttaaaggagccaagttttaaagggtcggatgatggagatggagaatttttcaatggg
tcacctaacggcagtatacattcgtctctagatgacctgaccagctctgatgagctattg
cagattaacgcttttatttctgacactggagtttgtaatgaacatggtaaaacgtatgca
ctatacgccatcactgtccagcgacgaagtttagacgccgttgaagacatgtggaaaacg
tatcgccgttacagtgactttcatgacttccacatgcgaatcacggaacagtttgagagc
cttgcaagccttttgaagctgcctgggaagaagacgtttaacaatatggataaggaattt
ctagaaaagcggagaaacgacttaaatgcatatttacagctgctactgaatccagagata
gtgaaagcgtgtcctgcacttgctcattatgtatttgacttccttgagaacaaagcctat
agtaaaggcaaaggcgactttgcaaggaagatggatacatttgtcattcctctgaggaac
tcaatgaggaatgtctccaatgtggttaaatcaatccctgatagtttggctgaaggaatg
aataaaatgtctgataacatgggcaaaatgtcagaaaaaatcggacaagatataaaacac
tccttctttaaggctccgattctcgtaccaaaaacggatgcatttccagaactctatcga
gtgtccgcacaactggatgacaatgtggatgacaacattccgctgagagtgatgcttctc
cttatggatgacgtctttgacttgaaagaaaggaatcagtggttaagaagacaaattaca
agccttctccagcagctcataagagcaacctatggagacaccattaatagaaaaattgtt
gaccacgtgcaatacatgacctccccagaccaagtagcggattatgtgaaacagttcaga
gaatcgttttggccaaatggaatattggcggaatcagctctacgaagagaccggagtatt
cgaatgagaacaagagtggcagctaaaaccaatctactggaaataatgccagatgaactg
aagcatatcattggtgctgaaacaactcggaaaggcatcctgcgggtgtttgaaatgttt
cagtacaaccagctgaacaggagacttgtgtacgtttttatagagggcttcctggaaacc
ttatttccacagtataagttccgtgagcttttctataaactccattctcggtcagaacgc
atgcaaaaatatagacagagagcacagccttctcaagcgccttccttgcagaaaaggtga
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