Xenopus laevis (African clawed frog): 108718919
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Entry
108718919 CDS
T01010
Symbol
vcp.L
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108718919 (vcp.L)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108718919 (vcp.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108718919 (vcp.L)
03009 Ribosome biogenesis [BR:
xla03009
]
108718919 (vcp.L)
04131 Membrane trafficking [BR:
xla04131
]
108718919 (vcp.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
108718919 (vcp.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108718919 (vcp.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108718919 (vcp.L)
Membrane trafficking [BR:
xla04131
]
SNARE
SNARE associated proteins
Others
108718919 (vcp.L)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108718919 (vcp.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108718919 (vcp.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
108718919
NCBI-ProteinID:
XP_041426407
Xenbase:
XB-GENE-17335247
UniProt:
A0A8J1LA55
LinkDB
All DBs
Position
1L:complement(230474086..230487942)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGSDSKSDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFQVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPVAKDVDVNFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPAGGQAG
AGPSQGAGGGSDGSHFTEEEDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggatcagattccaaatccgatgatttgtccactgcaatcttgaagcaaaag
agccggcccaatcggctgattgtggatgaatccatcaatgaggacaacagtgttgtgtct
ctgtctcaggccaagatggatgagctgcagctctttagaggagacacagtcctgctgaag
gggaagaagaggagagaagctgtttgcatcgttctctcagatgactcctgctctgatgaa
aagatccgcatgaacagagttgtccgtaacaacctgagggtgcggctcggagatgttatc
agcattcagccgtgcccagatgtgaagtatggcaaacgagtccatgttctgcccatagac
gacacagtggagggcatcactgggaatctgtttgaggtgtatctcaagccttacttcctg
gaagcctacagaccaatcaggaaaggtgacattttccaggtacgcggaggcatgagagcc
gtggagttcaaagtggtggagacggatccttccccatactgcattgtggcccccgatacc
gtcatccattgtgaaggggagcccattaagcgtgaagatgaggaggagtccttgaatgaa
gtgggctatgatgatattggaggctgcaggaaacaactggctcagatcaaagaaatggtg
gaactgcctctcaggcatccggcactctttaaggctattggtgtcaagcctcccaggggc
attctgctgtacggacccccaggaactggcaaaaccctcattgctagagctgtggccaat
gaaactggagctttcttcttcctgattaatggaccggaaatcatgagcaagctggcgggt
gagtctgagagtaacctgcgcaaagcttttgaggaggctgagaagaatgcccctgccatc
atctttatagacgagctggatgccattgcccccaaaagagagaagacacacggagaggtg
gagcgccgtattgtgtctcagctactaacactgatggacgggctgaaacaacgggcgcat
gtcattgtcatggcagccaccaaccgacccaacagcattgatccagcgcttaggcgattt
ggtcgttttgaccgggaggttgatatcggcatccccgactccactggacgtctggaaatc
ctgcagattcatactaagaacatgaagctttcggatgatgtggatctggaacaggttgct
aatgaaacccacggacatgttggtgccgatttggctgctctgtgctcagaagctgctctc
caggccataaggaagaagatggacctcatagacctggaagatgaaaccatagatgctgaa
gtgatgaattctttggctgtcactatggatgacttcaggtgggcgctaagtcagagtaac
ccctcagctctacgggagaccgtggtggaggtgccgcaggtcacttgggaggatattggt
ggtttggaagacgtcaagagggagctccaggagctggttcagtatcctgtggagcatcca
gacaagttcctgaagttcggaatgactccatcgaagggtgtacttttctacggtccgcct
ggatgtggtaagactttgctggctaaggccattgccaacgaatgccaggccaacttcatc
tccatcaaagggccggaacttctcactatgtggtttggagagtctgaggccaatgttaga
gagatctttgataaggctcggcaggctgctccctgtgtcctcttctttgatgaattggac
tccatcgctaaggcccgaggtgggaacattggagatggtggtggagctgccgacagagtt
attaaccagatccttactgagatggatggaatgtctacaaagaagaatgtcttcatcatt
ggagccaccaacagaccagacatcatcgaccctgccatcctgcgtcctggccgtctagat
cagctcatttacatcccgctgcccgatgagaagtcccgcatggccatcctgaaggccaac
ctgaggaagtctccagttgccaaggacgtagacgtcaacttcctggccaagatgaccaat
ggattctccggtgccgatctgactgagatttgccagcgagcctgtaaactggccatcagg
gaatctattgagaatgagatccgaagagagcgggaaaggcagactaacccctccgctatg
gaagtggaagaagacgaccccgtaccagaaatccgcagagatcacttcgaagaggccatg
cgattcgcccgccgctcagtcagcgacaacgacatccgaaaatacgagatgttcgcgcaa
actcttcagcagagccgaggattcggcagcttcagatttcccgctgggggtcaagctgga
gccggtccaagccaaggagccgggggaggcagcgacgggagccattttactgaagaagaa
gacgatctctatggttaa
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