Xenopus laevis (African clawed frog): 108718943
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Entry
108718943 CDS
T01010
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108718943
04121 Ubiquitin system [BR:
xla04121
]
108718943
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108718943
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108718943
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108718943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
TEN_NHL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
CRLF3_N
Vgb_lyase
DUF4094
Motif
Other DBs
NCBI-GeneID:
108718943
NCBI-ProteinID:
XP_018122965
UniProt:
A0A1L8FWE0
A0A974CM63
LinkDB
All DBs
Position
6L:complement(52403221..52450299)
Genome browser
AA seq
854 aa
AA seq
DB search
MASFPESDFQLCPLCKEMCVSSAPISSSSSSSSSSQVSSSSSSAGSAGGGGGTGLASAPP
RRLHVLPCLHAFCRQCLEGRRTPGESLQLRCPVCDHKVLMSEAGMDALPSSTFLHLSNLL
DAVVGAADEQQSNGGRAASNRQRSASCSSSGLLRRAPPSKSEPRCSSCDEGNGASSHCLD
CQENLCDNCLRAHQRVRLTKDHFIERFPASPCSSAASSAATTSSSSSSAFSLLPVYPERL
YCQQHDEEIYKYGMRKRVYTLADLVRIKNWVLHFYCDSCSVPICRECTMGRHAGHSFVYL
QEALQDSRALTIQLLADAQQGRQAIQLSLEQAQALAEQVEMKAKVVQSEIKAVTSRHKKA
LEERECELLWKVEKIRQVKAKSLYHQVEKLHQALNKLDSTINAVQQVLEEGCTMDILIAR
DRVLAQVQDVKNARGLLQLQEDDRIMFTPPDQALFLAIKSMGLVSSGAFAALTKATGEGL
KRALQGKVASFTVIGYDHDGEARLSGGDLITVLVMGPDGNLFAAEVSDQLNGTYLVSYRP
QLEGEHLISVMVCNQHIENSPFKVNVKSGRCYLGIGLPTLSFGGEGDHDGKLCRPWGVCV
DREGYIVVADRSNNRVQIFKPCGTFHHKFGSLGSRPGQFDRPAGVACDSSRRIVVADKDN
HRVQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGTFL
NKYGFEGALWKHFDSPRGVAFSQDGYLVVTDFNNHRLLIIKPDCQSAHFLGTEGTGNGQF
LRPQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQLDRPSGIAVTPDGT
IVVVDFGNNRILAF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattcccggagtccgatttccagctgtgccccctgtgtaaggagatgtgcgtg
tcctctgcccccatctcctcctccagctcttcctcatcctcctcccaggtgtccagcagc
agcagtagcgccggcagcgcaggaggaggcggtggcaccggtttggcctcagctcccccc
cgtaggttgcacgtcctgccgtgtctgcacgccttttgtcgccagtgcctggaggggcgc
cggacccccggggagtctctccagctgcgctgtccggtgtgtgaccacaaggtgctcatg
tccgaggccggaatggacgcgctgccctcctctaccttcctgcacctcagtaacctgctg
gacgcggtggtgggcgcagccgacgagcagcagagtaacggcggccgggcagcttcgaac
agacagcgctcagcttcatgttcttcctccggcctcctccgcagggcgccccccagtaaa
tcggaaccgcgctgctcctcttgtgacgagggtaacggggccagctcgcactgtttggac
tgccaggaaaacttgtgcgacaactgcctgcgggcccaccagcgcgtccgacttaccaag
gaccacttcatagagcgcttccccgcctccccctgcagctccgcggcatccagcgccgcc
actacctcgtcctcttccagctcggccttctccctcttgcctgtctacccggagaggctc
tactgccagcagcacgatgaggagatttacaaatatggaatgcgcaagagagtgtatacc
ctggcggatctggtgaggattaagaattgggtcctgcatttctactgtgactcctgctct
gttcctatatgtcgtgaatgcactatgggccgtcatgctgggcacagctttgtctacctc
caggaagctcttcaggactcaagggcactaactattcagcttctggctgatgcccaacaa
ggccgtcaagcaattcagctgagtctagagcaggctcaagcattggcagaacaagttgag
atgaaagccaaagtggtgcagtccgagatcaaagcagtcacctctagacacaagaaggca
ctggaagaaagagaatgtgagctactctggaaggttgaaaagatacgtcaggtgaaagca
aaatctctttatcaccaagttgaaaaactccaccaggcccttaataagctggacagcaca
attaatgcagtgcagcaagtcttggaggaaggctgtactatggatatcctcatagctcgt
gatcgtgttttggctcaggtgcaggatgtaaagaatgctagaggccttctacaacttcaa
gaagatgacaggattatgtttactcctcctgaccaagccttgttccttgccatcaaatct
atgggtcttgtcagcagtggagcttttgcagctttgactaaagccactggagaaggactt
aaacgtgccctacagggaaaagttgcatcattcactgttataggatatgaccatgatgga
gaggcccgcctttcaggtggggacctcataacagtgttggtgatgggtccagatgggaat
ctctttgctgctgaggtcagtgatcagctgaatggtacctacttagtgagttacaggcct
caactggaaggggagcaccttatttcagtcatggtttgcaaccaacacatagaaaacagt
ccttttaaagtcaatgtaaaatcaggacgttgctacctgggtattggacttcccaccctc
tcttttggtggggagggtgatcatgatggaaaactttgccgcccctggggagtttgtgtt
gacagggaaggttacatagttgtagccgataggagcaacaaccgtgtccaaatcttcaag
ccatgtggaaccttccatcacaaatttggcagccttggctctagacctggacagtttgat
cgacctgctggggtagcttgtgacagttcacgtaggattgttgtggcagacaaagacaac
caccgtgttcagatatttacctttgaagggcagttcttacttaagtttggtgaaaagggg
accaagaatggccagttcaactacccttgggatgtggcagttaatgctgagggaaagatc
ctagtttcagacactcgaaaccaccgtgtccagctgtttggtcctgatgggacattcctt
aacaagtatggctttgaaggtgcactctggaagcactttgactctccccgaggtgtagca
tttagccaggatggctatcttgttgtgacggactttaataatcatcggttattaataatt
aagccagactgtcagtcagcacatttcttgggcacagagggcacaggcaatgggcagttt
ttgcggccgcagggtgtagcagttgaccaggaaggccgcatcattgtggcagactccaga
aatcacagagtacagatatttgagccgaatggcagcttcctgtgcaagtttggaactcaa
ggaagtggctttggtcaattggatcgcccatctggtatagctgtaactcctgatggcaca
attgttgtggtggattttggtaataaccgcattttagccttttga
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