Xenopus laevis (African clawed frog): 108719091
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Entry
108719091 CDS
T01010
Symbol
drosha.L
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108719091 (drosha.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108719091 (drosha.L)
03009 Ribosome biogenesis [BR:
xla03009
]
108719091 (drosha.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
108719091 (drosha.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
108719091 (drosha.L)
Messenger RNA biogenesis [BR:
xla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
108719091 (drosha.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
RNase
108719091 (drosha.L)
Prokaryotic type
rRNA processing factors
108719091 (drosha.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
108719091 (drosha.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
108719091
NCBI-ProteinID:
XP_018123193
Xenbase:
XB-GENE-17344864
UniProt:
A0A974CNH8
A0A1L8FXL6
LinkDB
All DBs
Position
6L:complement(88479800..88630418)
Genome browser
AA seq
1323 aa
AA seq
DB search
MSLHSGRGGQQTRGAPMQPFRPQNLRPAQLPQSSGQYCYDPQSTPPPPTFCNMPNTNFIP
QRPDYMSYPPPSAPPTQSAINQCLPRPPFPVRQSYPIPPCFPPVPPASAPGSSPAVVPTV
GQCPYPYMLPPVMPPPPIMPPPLPHVPYQPPYTAGYPPQPFPPPPPAPQPTPSFNSYQQA
ASFQGNSHYRHASHGQYQTEKSQTDHRSQERGKHYEDHRRREYSHSDRHRSEKHGDRRDR
GRSSERSRRLEGIRHRSDYEYRRGPSRGRIPSRHPSYERSSRERPRHRESRRSTSTERSY
RKRPKSTSPSSREHKRSRWEEDTASLSESSSSAKEKSSISVKDKDSLDENLFERNEEADE
ELLKPVWVRCTHSESYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGKRQTTARAARPA
WEPPKTKLDEDLESSSDSECETDDSCSSSSDSDVFDVIAEIKRKKAHPDRLHEELWYNDP
GQMNDGPLCKCSLKARRTGIRHSIYPGEELTKACRPMTNNAGRLFHYRITVSPPTNFLTD
RPTVIEYDDHEYIFEGFSMFSHSPLTNVPLCKVIRFNIDYTIHFIEEMMPEHFCLKGLEL
FSSYLYKDILELHDWNLMDPFVENIDASCPQFHFMPRFVRFLPDGGKEVLSMHQVLLYLL
RCSKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVI
TFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLVQREEALQK
IRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHKCLMHLDKLIGYIF
TERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHYMHMRKKGINTLIN
IMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPLLEEGGLATYRTAIVQNQ
HLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALMGAVYLEGGLEEAKQLFGRL
LFGNEDLRDVWLNYPLHQLQLQESNSDRHLIETSPVLKKLTKFEEAIGVEFTHVRLLARA
FTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQ
AKVAEELGMQEFAITNDKTKRPVVLRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFP
RLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGE
RIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELIELRLEKEQQELAEE
KRK
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacattcgggaagaggaggacagcaaactagaggagcccccatgcagcctttt
agaccccagaacctaaggcctgctcagctacctcagtcttcaggacagtactgctatgat
ccacaaagtactcctcctcctccgacattctgtaacatgccaaacacaaattttatacca
cagaggccagattatatgtcatatcctccaccttctgctcctccaacacagagtgcaata
aaccagtgtcttcctaggcccccttttccagttaggcagagttatccaattcctccctgt
tttcccccagttccaccagcatctgccccaggcagttctccagctgttgtacctactgtt
ggacagtgtccatatccttacatgttgccaccagttatgccacccccaccaattatgcct
cccccattaccccatgttccctatcaacccccatatactgctggatatcctcctcaacct
tttcctccaccacccccagcaccccaaccaacaccaagttttaatagctatcagcaggca
gcatcttttcaaggtaacagccactacagacatgcaagccatgggcaataccagactgaa
aagtcacaaactgatcacagatcacaagagagaggcaaacactatgaagatcatcggcgt
agagagtacagccatagtgacaggcaccggtctgaaaaacatggtgaccgccgagatcga
ggccgaagttctgaaaggtcacgcagactagaaggcatccgtcacaggtcagattatgag
tatagaaggggaccatcacgtggtagaattccatcacgccatccaagttatgaaagaagc
agcagagaaagaccccggcatagagaaagtcgaagatcaacatctactgagagaagctat
aggaagaggccaaaaagtacatcaccatcaagcagagagcataaaagatctcggtgggag
gaagacactgcatctctatcagagagctcctcatcagcaaaagaaaagtccagcatttct
gttaaagataaggattctttggatgaaaacctatttgaaagaaatgaggaagcagatgaa
gaattgcttaaaccagtgtgggttcgttgcacccattctgagagttactactcaagtgac
cccatggatcaagttggagactccacagtagttggcacaagcagactacgtgatttatat
gacaagtttgaagaggagcttggaaagcgtcagacaacagctagagctgccaggccagca
tgggagccgccaaagaccaaattagatgaggatctagagagttccagtgactctgagtgt
gaaacggatgatagctgctccagcagttcagattcagacgtgtttgatgtaatcgcagaa
ataaaaaggaaaaaagcacaccctgaccgccttcatgaagagctgtggtataatgaccct
gggcagatgaatgatggacctctctgtaagtgcagtttgaaagctagacggactggaata
aggcatagcatttaccctggagaggagcttacaaaagcttgtcgcccaatgacaaacaat
gcaggacggcttttccactacaggataacagtgtctccaccaacgaatttcttgactgac
cggccaactgttattgagtatgatgatcatgagtatatatttgaaggtttttctatgttt
tcacattctcctctgacaaatgttcccctgtgcaaagtaatccggtttaacattgactac
acaatacatttcattgaggaaatgatgcctgagcatttttgtttgaagggcttggaactc
ttttcttcctatctgtacaaagatatattggaacttcatgactggaatcttatggatccg
tttgttgaaaacattgatgccagttgtccgcagtttcattttatgcctcgttttgtacga
tttctgccagatggtggcaaagaagtcctctctatgcatcaagttttattgtacttgttg
cgatgtagcaaacctttagttcctgaagaagagattgcaaacatgcttcaatgggaagag
cttgaatggcagaaatatgcagaggagtgcaaaggcatgattgtcactaatcctggcatg
aagcccagctcagtccgaattgatcagcttgatcgagagcagtttaacccagatgtaatt
acattccctatcattgtccattttggaataagacctgctcagctaagttatgctggagac
ccccagtaccagaaattatggaaaagctacgtgaaattgcgccatctactggctaatagc
cccaaagtcaaacaagctgacaagcagaaattggtccagagggaggaagctcttcagaag
ataagacaaaagaacacaatgcgacgtgaagtaactgtagagctaagtagccaaggattt
tggaaaactggtatccgctccgatgtctgtcagcatgcaatgatgctcccagttctgaca
catcacatacgctaccataaatgcttgatgcatttagataaattaattggatatatcttt
acagaacgatgtttgcttcagcttgcaatgactcatccaagccatcatttaaactttggg
atgaacccagaccatgcacgaaactccctctcgaattgtggtatcaggcaaccgaaatat
ggagacagaaaagtgcattacatgcatatgcgtaaaaagggaataaataccctgataaat
ataatgtcacgtctgggacaagatgatccaaccccttcaaggataaaccacaacgaacgt
cttgagttcttaggagatgcggttgttgaatttctaacaagtgtccatctgtactacctg
tttccattgctggaagaaggaggattagctacctaccgaacagctattgttcagaatcaa
catcttgctatgctggcaaagaaattggaattggatcgatttatgttatatgctcacggg
ccagatctgtgtagagaatcagacttacgccacgccatggcaaactgctttgaagcgctc
atgggtgcagtttatttggaaggtggactcgaagaagcaaaacaattatttggaagactg
ctcttcggtaatgaggacctgcgagacgtgtggcttaattatccactacaccagcttcaa
ctgcaggagtctaattctgataggcatctgattgagacatccccagttctaaagaagctc
acgaagtttgaagaggcaattggagttgagtttacacatgttcgacttcttgctcgggct
tttaccttaagaactgtaggatttaaccatctgacattaggccacaatcagagaatggaa
ttcctgggtgattctataatgcagctggtagccacagaatatttattcatacatttccct
gatcatcatgaaggccacttaacgctgctgcgaagctccttggtgaacaacaggactcag
gccaaagtagcagaggagcttggcatgcaagagtttgccatcacaaatgataagactaag
cgaccagtggtactccgcacaaagaccttggctgatttattagaatcctttatcgctgcc
ctttatattgataaggacctggaatacgtccacacgtttatgaatgtttgcttctttcca
cgactgaaggagttcatattgaatcaagactggaatgatccaaagtctcaacttcaacag
tgttgcctcaccctgagaacagaaggcaaagagccagatattcccttatacaaaactcta
caaacagtagggccctcccatgctcgaacatacacagtcgctgtatatttcaaaggagaa
agaattggctgtggtaaaggccccagtattcagcaagccgaaatgggtgcagcaatggat
gctttggagaaatataacttcccccagatggctcatcagaagcgctttatcgaacggaag
tacaggcaggaattaatagaactcaggttagagaaggagcaacaggaattagcagaagag
aagagaaaataa
DBGET
integrated database retrieval system
