Xenopus laevis (African clawed frog): 108719092
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Entry
108719092 CDS
T01010
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108719092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108719092
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108719092
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108719092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_5
Spore_III_AB
ATG14
Exonuc_VII_L
AAR2
U-box
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
108719092
NCBI-ProteinID:
XP_018123196
UniProt:
A0A8J0VNY9
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Position
1L:231844918..231847232
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AA seq
525 aa
AA seq
DB search
MATADLRDELSCSICLSIYTDPVSLPCGHNFCQVCIGTTWDTQEGSGAYSCFECKAEYQE
RPALPRNRTLGNIAERFRPTETEPGETGIFCTYCVLSPVPAAKSCLLCEASLCDTHLRGH
SKSAEHVLTQPTNSFMGRKCSVHHKVLEYFCCEESVCVCVSCCLAGEHRGHRVELLSEAS
EKKKEKLRKVVEKLRPEREETERGAQRLQERRREVAEKAAGETERVIALFRDIREQLEAL
EKRLLSDISSQKEELSLQLSDLMEQLEIKKDELSRKIRHIEELCNMADPLTVLQERESHG
AADNEGGRERHDIKVPAVGDLDMDLISETLLTGLAAIVTGVKGRIYGQEATDLLLDINTA
GNHVSVSGDRKSASYSDTDHGHPQSPERFQDYAQTLSSRSFPSGRHYWEVEVSESGNCRV
GVAYPSIERRGGQSWIGENNKSWCLCRLFNNNIYAVIHNSEWEELSYIASCRRIRISLDY
EAGRLSFYELSEPIRHLHTFTATFTEPLHAAFWVSGCDSSMRIIS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctgatctgagagacgagctgagctgctccatctgcctgagcatttatact
gatcctgtatccctgccgtgtggccataacttctgccaggtctgtattgggacaacatgg
gacacccaggagggatctggggcttattcctgctttgaatgtaaagcagagtatcaggag
cgccctgccctgcccaggaacagaactctgggtaacatagcagagagattccgtccaaca
gagacagagccgggggagactgggatcttctgcacctactgtgtcctctctcctgtacct
gctgctaaatcctgtctcctgtgtgaggcttctctgtgtgatacccacctgagggggcac
agcaagtcagcagaacatgtactgacccaacccaccaactcctttatggggagaaaatgt
tctgtacatcacaaggttctggagtatttctgctgtgaggagtctgtctgtgtctgtgtg
tcctgctgtctggccggagagcacaggggccacagggtggagctgctgagtgaggcctct
gagaagaagaaagagaaactgaggaaagttgtggagaaactgaggccagagagagaggag
actgagagaggagcccagagactgcaggagcgcaggagagaagtggcagaaaaagcagcc
ggtgagacagagagagtcattgccctgtttagagacatcagggaacaactggaagcccta
gagaagcgactcctgagtgacatctccagccagaaagaggagctttccctccaactctct
gatctgatggagcagctggaaataaagaaggacgagctgtccaggaagatccgtcacatt
gaggagctgtgcaacatggcagatccactcactgtcctacaggaacgggaatcacatgga
gctgcagataatgaggggggcagagagagacatgatataaaggtccctgctgtaggggat
ctggatatggatctgatctcagagacattactcacaggcttagctgccattgtgactggg
gtaaagggaaggatctatgggcaggaggctacagacctgttactggatataaacacggct
gggaatcatgtatctgtatcaggggacaggaaatctgcttcttactctgatactgaccat
ggtcacccacaatccccagagagatttcaggattatgctcagactttaagcagcaggagt
ttcccctcagggcgacattactgggaagtggaggtcagtgaatcagggaactgcagggta
ggggtggcctatcccagtatagagaggagagggggtcagtcctggataggagaaaataac
aagtcttggtgtttgtgcagactgtttaataataatatctatgcagtgatacataatagt
gaatgggaagaattatcatacattgcttcctgcaggagaatcaggatctcactggactat
gaggccggacgtctgtccttttatgagctgagtgagccaatcagacacttacacaccttc
actgccacattcactgagccccttcatgctgcattctgggtctctgggtgtgattcctca
atgagaatcattagttag
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