Xenopus laevis (African clawed frog): 108719146
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Entry
108719146 CDS
T01010
Symbol
atxn1.L
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108719146 (atxn1.L)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
108719146
NCBI-ProteinID:
XP_018123302
Xenbase:
XB-GENE-6487519
UniProt:
A0A8J1KY62
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Position
6L:98671145..98836762
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AA seq
789 aa
AA seq
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MKSNQERSNESLPPKKREIPATSRPSQEKSVGLTNENHRTNSLSWLPSKPSSDLGARHHG
PPRTSAETGLQKGGSLHKSLSTSMDYSPTSTTRSVPVATTVPANYQTAQSLSGASMSPVE
YANVSQTYQFIGPQYSGQSYAGFINSQLISPTSNSGSSAVSSMPVGVTTPTQRSQVEAFS
SMLANTNSLSQHGHKIDLNRTPGLVTAGSPTQPSQYVHISSSSQSTVRTLSPPVHLPTHS
TVIPNTLTLGAPSQMVVYSDSGAQFFARDPTKKEDNYRSQTKELLNGEIEKARRFGVPCN
ADAQLMKAGNNKPTSQHYETRHVVVHPSTDYSTRDPSGVRTSVMVVPNSNTTATDMDVSQ
TIKRETSPLAAHNKGSIHLGKSTHRSYALSPQQTLCPEIVKTMATLSPHTVIQTTHSAAE
QLSVGLPAAFYAGTQQPVIGYLSSQQQTIGYPGNLPHHLVFPGTQPLLIPVGNPDIESSR
VGVAPGIVTSSPQFAAVPHTFVTTPIPKGENYSAETLATQTAYQAALVPAQFHLPVVQSV
ASHMATAPTLPPYFMKGSIIQLANGELKKVEDLKTDDFIQSADISNDLKIDSSTVERIEN
SHSPGIAVVQFAVGEHRSQVSVEVLIEYPFFVFGQGWSSCSPERTSQMFDLPCSKLSVGD
VCISLTLKNLKNGSIKKGQSMDSANFLLKHPKNDSLSGSRHRYAEQENGINQGSSQIASE
NGELRCPAALNAAKLEPGKPLATRKRRWSAPETRKVEKFEEEPPLTLPKPSFIPQEVKIC
IEGRSNVGK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaatcaagaacgaagcaatgaaagcctgccaccaaagaaacgtgaaataccc
gccaccagtcgaccttctcaagagaagagtgttggactgacaaatgaaaaccaccgcaca
aatagcttatcgtggctgccatccaagcccagcagtgaccttggtgcacgccatcatggg
cctccaagaacttcagcagaaactggtttacaaaagggaggaagtttacacaaatcactt
tctacaagtatggactattctcccactagtactacaagatcggtaccagttgcaacaaca
gttcctgcaaattaccaaactgctcagtctctgtcaggggcatctatgtctcctgtggaa
tatgctaatgtgtcccaaacctaccagttcattgggccacaatatagtggacaatcatat
gcaggattcataaattcacagctaatttcacctacatcaaattctggatccagtgcagtg
tcctccatgccagtaggtgttacaactccaacccagcggtcccaagtggaggctttttcc
agtatgctggccaatacaaacagcctaagtcagcatggacataaaatagatctaaatcgg
acaccaggattggttactgcagggtcacctactcagccaagtcaatatgtccacatttcc
agttcatcgcagagcacagtcagaactctttcaccacctgttcatttacctactcactct
acagtgattccgaatacacttacactaggtgcaccttcccagatggttgtgtactcagat
tcaggagctcaattttttgctagggaccctactaagaaggaagacaattacaggtcacag
accaaggagttgttaaatggagaaatagagaaagctcgaagatttggagtcccttgtaat
gcagatgcacagttgatgaaagcaggcaataataaaccaacttcccaacattatgagaca
agacatgtagtggtgcaccctagtactgattatagtactcgggatccctcaggagttcgg
acctcagtcatggtagtgcctaacagcaacacaactgccacagacatggatgtctcacag
accattaagagagaaacctcacctttagcagctcataacaagggaagcatacatttagga
aaatcaacccatcggtcctatgctttatccccacagcaaacattatgcccagaaattgta
aaaactatggccacattatctcctcacactgtcattcagacaactcacagtgcagcagaa
caactttctgttggtttgcctgctgctttttatgcgggtacacaacagccagtcattggc
tatctcagcagtcagcagcaaaccattggctaccctggaaatttgccacatcacttggtg
ttccctggcacccagcccttacttatacctgttggcaatccagacattgaatcatctagg
gttggggttgcacctggtattgtgacatcatctccccagtttgcagcagtgcctcataca
tttgtcactactcccattcctaaaggtgaaaactacagtgctgaaacactggcaactcaa
actgcctaccaggctgcattggtcccagctcaattccacctccctgttgtacagtctgtt
gcttctcatatggcaactgcccctacactgcccccttactttatgaaagggtcaatcatt
cagctggccaatggtgagctaaagaaagtagaggatttaaaaacagatgacttcatacaa
agtgcagatattagcaacgacttgaaaatagactccagcacagtggagagaattgagaac
agccatagtccaggcatagcggtggtacagtttgctgtgggagagcaccggtcacaggtc
agtgtcgaagtcttgatagagtatccgtttttcgtatttggtcaaggctggtcctcctgc
agtcctgaaagaacaagccagatgtttgatttgccatgttccaagttgtcagtgggcgat
gtctgcatatcgctaacactcaaaaatctgaaaaatggctcgataaagaaaggccagtcc
atggattcggctaacttcttgctgaagcacccaaagaatgacagtttatctggaagcagg
cacaggtatgcagaacaagagaatggaattaatcagggaagttcacagattgcatctgaa
aatggtgaactgagatgtccagcagcattgaatgcagccaaactagaacctggaaagcct
ctggcaacaaggaagaggaggtggtctgccccagaaacacgaaaagtagagaagtttgaa
gaagaaccaccattgactcttcccaagccttcttttattcctcaggaggttaaaatttgc
attgaaggtcgatctaatgtaggcaagtaa
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