Xenopus laevis (African clawed frog): 108719336
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Entry
108719336 CDS
T01010
Symbol
cdh17.L
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
108719336 (cdh17.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
108719336 (cdh17.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
He_PIG
Motif
Other DBs
NCBI-GeneID:
108719336
NCBI-ProteinID:
XP_018123620
Xenbase:
XB-GENE-6486679
UniProt:
A0A974CP14
A0A1L8FZI5
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All DBs
Position
6L:complement(137797455..137835589)
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AA seq
827 aa
AA seq
DB search
MSRLMILFVLSFLQTMILVNGQSQLKGYLEDKEFTVQEEVRNTLIYQFLSRKVNSTFTLD
GETDGVIEVDPHDGWLKAAGALDWEKRKVHKLKIQTLNELGHIVEGPFSITIIVEDVNDN
LPVFNQSEYEGQVREKSRPGRVFLRVYATDADDPTTPNAQLSYSILKQIPDSTPKYFQIN
NSTGGISVTLNGSQLITAGKQYSLIVQVLDSAENPFSKTAIVKINVTENIWVAPPPQTIK
ENSTEPHPMKIAQVRWNDNEAVYELHQRDRYPRFPFYVDSIGDIYVREPLDREERSQYIF
YVMAKSHNGIFTSQPLKIEVNVEDINDNPPVCPALVTIFEVQENEGIGSTIGDFRASDID
EEASLNSLLEYKLLEQSPTIPFDKIFYLQEITGQLQLQKTALNVQEADEYILKVEVSDRG
VPTPLKTVCTIQVNVIDINDNIPIFEESDYGNVTIREDTQLQTVVMEIQAKDNDQPNTGS
SLINYEIKEGDPHQMFIIETDRETNRGFVKIAKLLDFETMQEHRLVIHATNPEPLFAEVA
YNDSSITQLTVFVLNVDEKPYFNETLYQKQVKEDVPVGTKLATITAIDPEGDSIRYSLQG
DSRNWLRIDEYTGEMFTKALLDRETESHYRVTLIASEKNNPHMSASTIFHLFLEDVNDNP
PRLAKSYFGTSFCHPVTKPESVVIEATDADAQRLTPFKFSLNPDEKDWKIGRINGTHAKL
TMVRTDFEMKNYDVQVIINDQGTPPLESKVHIPVSICSCTSKNECDTPPEENSKLPSIGM
ALGILFGTLAVIGLIVAAVFISINQKKKKEGKAADARDPAETRPLDS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggctcatgattctctttgtcctgtccttcctacagaccatgattttggttaac
ggacagtcacagttgaaagggtatctagaggataaagagttcacagttcaagaggaagtg
cgcaatacattaatatatcagtttctttcaagaaaagtcaactcaacattcacactggat
ggtgagaccgatggtgtaattgaggttgatccacatgatggatggctgaaagcagcaggt
gcccttgactgggaaaaaagaaaagtgcacaaattaaagattcaaaccctaaatgaatta
ggacacattgtagaaggtccattttccatcaccattatagttgaagatgtcaatgacaac
ctaccagtgttcaaccagtctgaatatgaagggcaagtaagagaaaaatccagaccagga
agggtgtttctgagagtttatgccactgatgcggatgatcccacaacacccaatgcccag
ttgtcctacagtatcctgaaacaaatcccagactccacgcccaaatactttcagattaat
aacagcaccgggggcatttctgtgactttgaatggaagtcagctgataactgcaggaaaa
caatatagccttattgttcaggttttggattcagcagaaaacccttttagcaaaactgcc
attgtaaagatcaatgtaacagaaaacatctgggttgcaccaccgcctcaaactattaag
gagaattccacagagcctcatcctatgaaaattgctcaggtcagatggaatgataatgaa
gctgtttacgaattacaccagagggacaggtacccaaggttcccattttatgtagattct
attggagatatttatgtgagagagccgctggacagggaagagaggagccagtacatcttc
tatgtcatggcaaaaagtcataatggaatttttacatcacagcccctaaagattgaggtg
aatgttgaggatattaatgacaaccctccagtgtgtccagctcttgtcactatttttgaa
gttcaggaaaatgagggcattggcagcactattggagacttcagagcaagtgacatcgat
gaagaggcttcattaaattccctcttagagtacaaactcttagaacaatctcccacaatt
cctttcgacaaaatattctacctgcaagaaatcactggacagcttcagttgcaaaagact
gcactaaatgttcaagaagccgacgaatatatcttaaaggtggaagtttcagatcgtggt
gttcctacacctctcaagacagtttgtacaatacaggttaatgtgatagacatcaatgac
aacattcctatatttgaagagtctgattatgggaatgtgaccattcgagaagacacacaa
ttgcagacagttgtgatggaaatacaggccaaggataatgatcagccaaacaccgggagc
tcgctcattaattacgagataaaggagggggacccacaccagatgttcattattgaaaca
gatcgagagacaaatcgtggatttgtaaaaatagccaagcttctggactttgaaaccatg
caagagcacaggcttgtgatccatgctaccaatccagaaccgctgtttgctgaagttgct
tataatgacagctcgatcactcagttgacagtttttgtgttgaacgttgacgaaaaaccc
tactttaatgagactctgtaccaaaaacaggttaaggaggatgtgcctgtaggaactaag
ctagctacgatcacagccattgaccctgagggagacagtatccggtattcattgcaagga
gacagcaggaattggcttaggatagatgaatatactggagagatgttcaccaaagcatta
ctggacagggaaacagaaagccattatagagtgacattaatcgcttcagagaagaataat
ccacatatgagtgcctctacaatttttcacttgttcctcgaagatgtcaatgacaatcca
ccgagattagccaagagctactttggtacttccttctgccaccctgtgaccaagccagag
tcagtggtgattgaggcaacagatgctgatgcacaaaggctaacgccattcaaattcagc
cttaaccccgatgaaaaagattggaagattggacgaataaatggtactcatgctaaacta
acaatggtacgcacagattttgaaatgaaaaactacgatgttcaagtaataattaatgac
caagggactcctccacttgaatcaaaagtccatattccagtgtctatatgcagctgcact
tctaaaaacgagtgtgacaccccccctgaagaaaactcgaaattgccctccattggaatg
gccctaggtatcttgtttggaactctcgcagtcataggtttgatcgttgcagctgtgttt
atctctatcaatcaaaaaaagaagaaggaaggcaaggcggctgatgctcgggaccccgca
gagacaagacctttggactcctaa
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