Xenopus laevis (African clawed frog): 108719350
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Entry
108719350 CDS
T01010
Symbol
pop1.L
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108719350 (pop1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
108719350 (pop1.L)
03016 Transfer RNA biogenesis [BR:
xla03016
]
108719350 (pop1.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108719350 (pop1.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
108719350 (pop1.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
108719350 (pop1.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
108719350 (pop1.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
108719350 (pop1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POPLD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108719350
NCBI-ProteinID:
XP_018123645
Xenbase:
XB-GENE-17338361
UniProt:
A0A1L8FZP3
A0A974CPS3
LinkDB
All DBs
Position
6L:complement(139504642..139531574)
Genome browser
AA seq
989 aa
AA seq
DB search
MSNAKEKKYAKRMRNQPSNVSLDIGTEQGDRPRYSGGRGSFQPHRESHPGPSGQHPRHSY
QSPGSHFHGRGGQGRGGPSEVPLVPKYITATMFAQARAAEINAMVKAVSQKSSNTLVFQS
LPRHMRRRAMGHDIKRLPRRLREIAKKEIEKSAHLKKAVSKNKCRKARRRHGNLQLEFNR
RQRKNIWLETHVWHAKRFHMVKKCGYCLGHRPTMKSYRACYRAMNSHCLLQDLSYYCCLE
LMGEEAVLLNALSRLTSTETGPSFAAAFCLSGKRQGSLVLYRADKYPREAIGPVTFVWKP
ACVPVSPSDKRQLWIWCHPSLKQDILIELRQVCQCEETPDNAVCKPDPVLTPQPEKPQTA
LTTTTKKRKRQDKDGEQAVPVKKIIGDGTRDSLDPYYWISKQTAIRISDLTMEFVRYRLI
GPLSHCVLTEALRAAPLHKEMEGDAGPHSWWADYCSNPENLRLHTLQESMLQLLQAVGSP
AELAPGTILGLTVGDPRLNLPKQKTKAVPNLEKYEDRDQVKSIRLNGFPLECAQSLIWTS
DICSKVTEKKVPEQEINRMRSELLVPGSRLELGNNESKIPVLLIQQPGKRTGNDRPGWGS
GWDICLPKGWGMAFWIPFIYRGVRVGGLQQGLQHSQYMGIPDATGDFPDCLAGVQSAKEM
EDSLLNAYKRRPPAKRANFIKHGVLAPFRCPWEQLTAEWEQRAGGVTEVHGAEKEEVATT
DISMEEQHKGEEAPQRIETETLEDVDMGSAPQGTTGSEQDMEKADGARVCVLRNKRILKE
LSTLCGLCNRYGPRYKQTSSPTPQATSDMLQQVLHNFPRSLVWVRLTMLTKGSPELHAMI
CIPSEQDFIQLAADKSFAGPQEPKHGDPIKKKVLKHQKEKKKKAKAKLEKEAAQQKEEIS
QDDEDDQLTLGLWPNPLPPIINHCCRTLLGFVTHGDFSMAAGCGESLGFVSLTGLMDMLS
GQPVNRTGYVLLRNPSSLQYRFAKIMVDA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgcaaaagagaagaaatatgcaaaaaggatgcggaaccagccatctaatgta
agcctggacataggcaccgaacagggtgataggcctcgttacagtggagggcgtggaagc
tttcagccacacagagagagccaccctggcccctctggacagcatccgcgacactcttat
caatcacctgggtctcatttccatggtagaggtggtcaaggaaggggaggacccagtgaa
gtgcctcttgtccctaaatacataacagcaaccatgtttgctcaggcgagggctgcagag
atcaacgcaatggttaaggctgtttcccagaagtcttccaacaccttggtttttcagtcg
ctacccagacatatgcgcagacgagctatgggtcatgatataaagcgcttacccagaagg
ctcagggagattgcaaagaaggagatagaaaaatctgcgcacctcaaaaaagcagtgtcc
aagaacaagtgccgtaaagctcggaggcgtcatggcaatcttcagctagagttcaaccgc
aggcagagaaagaacatttggttggaaacgcatgtttggcatgcaaagcgctttcacatg
gtgaagaagtgtggatactgcctgggacataggcctacaatgaagagttacagggcttgc
taccgagctatgaacagtcactgccttctgcaggatttgtcttattactgttgcctggaa
ttgatgggtgaagaagctgttctgctgaatgctttgtcaagactcacaagcacagagact
ggcccatcttttgctgctgccttctgtctctctggaaaacgtcaaggatcattggtcctt
tatagagctgataaataccccagagaagcaattggtcctgttacatttgtctggaaacca
gcttgtgtccctgtttctccatctgataaaaggcagttgtggatttggtgtcacccttca
ctcaaacaggacatacttatagaattaagacaagtttgtcagtgtgaggaaacgcctgac
aatgctgtctgcaaaccagatcctgttctcactccacaaccagagaaaccacaaactgct
ctaacaactaccaccaaaaagagaaagcgacaagataaggatggggagcaggcagtacct
gtgaaaaaaatcattggtgatgggactagggattccctggatccttattactggatatca
aagcagacagccatcagaataagtgacttgacaatggaatttgtccgctatcgactaatt
ggccctctctctcactgtgtgctaactgaagctttgcgtgctgctcctcttcataaggaa
atggaaggtgatgcaggacctcacagctggtgggcagattactgtagtaaccctgagaat
cttagacttcataccctccaggaatccatgcttcagctcctgcaagctgtaggatctcca
gcagaattagcccctggtaccatattgggactcacagtgggagatccaagactaaatttg
ccaaagcagaagactaaagctgtaccaaacttagaaaagtatgaagaccgagaccaagtg
aaatccataagactgaatggttttcctctggagtgtgctcaaagccttatatggacttct
gacatatgctcgaaagttactgagaaaaaagttccagaacaggaaataaaccgcatgagg
agtgagctgcttgtcccgggctcccggctggagttggggaataatgaatccaagatccct
gtcctgctgattcagcagcctgggaaacgcactggaaatgatcggcctggctggggaagc
ggctgggacatctgcctgcccaagggatggggaatggctttctggattccttttatctac
agaggtgtgcgagttgggggtttgcagcaagggcttcagcactctcagtatatgggaatt
ccagatgctactggcgactttcctgactgcctggctggggttcagtctgcgaaggagatg
gaggatagtctgctgaatgcctacaaaaggcgtccacctgcgaagagagcaaactttatc
aagcatggagttcttgcaccattcaggtgtccctgggagcaactgactgcagagtgggag
cagagggctggaggcgtaacagaagtccatggagctgaaaaggaggaagtcgcaacaaca
gacataagcatggaagaacaacataagggggaagaggcaccacagagaattgaaactgag
actctagaggacgtagatatgggatctgctccccaaggcaccacgggaagtgagcaggat
atggaaaaagcagatggagccagagtgtgtgtgttgaggaacaaaaggattctgaaggag
ctttctacactttgtggcctgtgtaatcggtacggcccaagatataaacaaactagcagc
cccactccacaggcaacatctgatatgctacagcaggttctgcacaatttcccacgctct
ctagtgtgggtcaggctgactatgttgactaagggtagcccagagctccatgccatgatc
tgtataccttctgagcaggacttcattcaacttgctgctgataaatcatttgctggccct
caggagcctaaacatggagaccccatcaagaagaaagtattgaaacatcaaaaggaaaag
aagaagaaagcaaaagctaaactggagaaggaggcagcacaacaaaaggaagagatctcc
caggatgatgaggacgatcagttgacccttggtttgtggcctaatcctctacctccaatc
atcaatcactgctgtagaaccctgctcgggtttgtcacccacggggacttttctatggct
gccggctgtggagagtcattagggtttgtcagcttaactggcctcatggacatgctctct
ggtcagccagtgaacaggaccgggtatgtgttgcttagaaacccgtcctctttgcagtac
aggtttgcaaaaataatggtagatgcataa
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