Xenopus laevis (African clawed frog): 108719366
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Entry
108719366 CDS
T01010
Symbol
ubr5.L
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108719366 (ubr5.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108719366 (ubr5.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108719366 (ubr5.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
108719366 (ubr5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
WD40_RLD
zf-UBR
Motif
Other DBs
NCBI-GeneID:
108719366
NCBI-ProteinID:
XP_041422507
Xenbase:
XB-GENE-17330632
UniProt:
A0A8J1KYW4
LinkDB
All DBs
Position
6L:complement(141805728..141908845)
Genome browser
AA seq
2799 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNLSSHPPLNVLEQTTIKQCVVGPNHAAF
LLEDGRICRIGFSVQPDRLELSKPENNDGSKLSSGSGAGRTSRPGRTSDSPWFLSGSETL
GRLAGNTLGSRWSSGVGGSGGGSSGRSSAGARDSRRQTRVIRTGRDRGSGLLGSQPQPVI
PASVIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASE
SYLPGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRIGSSRVLLLP
LERDSELLRERESVLRLRERRWLDGASFDNERGSTSKEGEPALDKKNTPIQSPVSLGEEL
QWWPEKDGTKFISIGALYSELVAVSTKGELYQWKWMETEPYRNTQNPSLHHPRASFLGLT
NEKIVLLSANSIRATVATESNKVATWVDETLSSVAAKLEHTAQIFPELQGEKIVSLHCCA
LYTCAQLENNLYWWGVVPFSQRKKILEKARAKNKKPKSSAGISSMPNIIVGTQVCLRNNP
LYHAGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKNLEKTNKTTEAKPESKQ
EPVKTEMGPPPSPASTCSDASSIASSASMPYMFCSFQERRRSTPAPKEEEKVNEEQWSLR
EVVFVEDVKNVPVGKVLKVDGAYVAVKFPGASNNSNNQGTPVCDPDPSSLLQDCRLLRID
ELQVVKTGGTPKVPDCFQRTPKKLCIPEKTEILAVNVDSKGVHAVLKTGTWVRYCIFDLA
TGKAEQENNFPTSSIAFLGQNERNVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPD
WLDLPPISSLGMGVHSLTNLPANSTIKKKAAIIIMAVEKQTLMQHILRCDYEACRQYLMN
LEQGIVLDPNTQMLQTFLSHRCDGNRNILHACVSVCFPTSNKETKEEEEAERSERNTFAE
RLSAVEAIANAISVVSSNGPGNRAGSSSSRSLRLREMMRRSLRAAGLGRHEAGASSDHQD
PVSPPIAPPSWVPDPPAMDPDGDIDFILAPAVGSLTTASTVPGQGPSTSTIPGPSSEPSV
VESKDRKANAHFILKLLCDSIVLQPYLRDLLSAKDARGMTPFMSAVSGRAYPAAITILET
AQKIAKAEANSSEKEEDIFKGMICPPGTNSDDSPLYVLCCNDTCSFTWTGAEHINQDIFE
CRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLL
YRLLTITNLVTMPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANPEDTDMP
DHDLEPPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIGHLLPEEQVYLNQQG
GTIRLDCFTHCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAVAVTMRFLRSVARV
FVILSVEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTA
PFTLASTSIDAMQGSEELFSVEPLPPRPSSDQSNSSNQSQSSYIIRNPQQRRISQSQPVR
GRDEEQDDIVSADVEEVEVVEGVAGEEDHHDEQEEHGEENTEAEGQHDEHDEDGSDMELD
LLAAAETESDSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSD
SSSSQSDDLDQETFMIDEPLERSSNSNHANGAAQAPRSMQWAVRNTQSQRAPNTTPSNTS
TPAASSGALIYIEPSSLRRSGNMSSSAAATAAALEASNSSSYLTSASSLARAYSIVIRQI
SDLMGLIPKYNHLVYSQIPAAVKLTYQDAVNLQNYVEEKLIPTWNWMVSIMDSTEAQLRY
GSALASAGDPGHPSHPLHASQNSNRRERMTAREEASLRTLEGRRRATLLSARQGMSARGD
FLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKR
TRELLELGLDNEDSEHENDDDTNQSLTLNDKDDDTLPSETGPNHPFFHRSDSMTFLGCIP
PNPFEVSLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSTANTGKCLLEVTVDRNCLE
VLPTKMSYAANLKNVMNIQSRQKEAEEQNVPTEENETSKPGPSAHDLAAQLKSSLLAEIG
LTESEGPPLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGG
FEVKESKFRREMEKLRNQQSRDLTLEVDRDRDLLIQQTMRQLNNHFGRRCATTPMAVHRV
KVTFKDEPGEGSGVARSFYTAVAQAFLSNEKLPSLDCIQNANKGTHTSLMQRLRNRGERD
RERERDMRRSSGLRTGSRRDRDRDFRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGE
RLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGAD
SILDLGLLEAADKVQENRKRHGSSRSVVDMELTDTDDGDDNAPLFYQPGKRGFYSPRPGK
NTEARLNCFRNIGRILGLCLLQNELCPITLSRQVIKVLLGRKVNWHDFAFFDHVMYESLR
QLILASQSPDADAVFASMDLAFAIDLCKEESGGQVELIPNGVNIPVTPQNVYEYVRKYAE
HRMLTVAEQPLNAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDES
GENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQ
HLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatacacttcgtggtgcacccgctgcccggcaccgaggatcagctcaatgat
cggctgagagaagtttctgaaaagctgaacaaatacaatttaagcagccacccccctctg
aacgtacttgaacagaccactataaaacagtgtgtggttggacccaatcatgctgctttc
cttttagaggatggaagaatttgtcgaattggtttctcagtgcaaccagacagactggaa
ttaagcaaacctgaaaataatgacggttcaaagttgagcagtggctcaggggcaggaagg
acatccaggccaggcaggactagtgactccccttggtttctgtctggttctgaaactctg
ggcagactggcaggcaacacccttggaagcaggtggagttctggtgttggtggaagtggt
gggggatcctctgggcggtcatcagctggtgctagagattctcggaggcaaacaagagtt
atccgcacgggaagggacaggggctctggtctcttgggcagtcaaccgcagcctgtgatt
ccagcttctgttattcctgaggaactcatctcacaggcacaagttgttcttcaaggaaaa
tcacgaagtgtcatcatccgagagctgcagagaacaaatctcgatgttaaccttgcagta
aacaacctcttgagtcgagatgatgaagatggggatgatggtgatgacactgcaagtgaa
tcctacttgcctggagaagatcttatgtcactgctggatgctgacattcattctgctcac
ccaagtgtcataattgatgctgatgctatgttttcagaagatattagctactttggttat
ccatcttttcggcgctcttcactttccaggataggctcatccagagttctccttcttccc
ttagagagagactctgaactgttgcgtgaacgtgagtcagtgttgcgtttgcgtgagcgg
cggtggcttgatggggcctcgtttgataatgaaagaggctccacaagcaaagaaggggag
cctgcccttgataagaagaacactcccatacagagcccagtgtcgctgggagaagagctg
cagtggtggcctgaaaaggacgggacaaagtttatttctattggagcactttattctgag
ctggttgctgtaagcactaagggagaactttatcagtggaagtggatggagacggagcct
tataggaatacacagaatccatcattacatcatccaagagcatcgtttttaggtctaaca
aacgagaaaatagtcctgttgtcggcgaacagtatccgagccacagtcgctacagaaagc
aacaaggttgccacttgggttgatgaaacattaagctctgtagccgccaagttagaacac
acagctcagattttccctgagctgcaaggagagaagattgtgtcgttgcattgttgtgca
ctttatacgtgtgcacagttagaaaataacctttattggtggggtgtggttcccttcagt
cagaggaagaaaatactagaaaaagcacgcgcaaagaataaaaaacccaaatcaagtgcc
ggaatttcatccatgccaaatatcatagttggcacccaggtatgcttaagaaataaccct
ctctaccatgcgggtgcagttgctttctcaatcagtgctggcattcctaaagtaggagta
ttaatggaatcggtgtggaatatgaatgatagctgcaggttccagctccgttctccagag
agtctaaaaaacttggaaaaaacaaataaaacaactgaggccaaacctgaaagtaaacag
gagcctgtaaaaaccgagatgggccctcccccatctccagcatctacctgtagtgatgcc
tcttcaattgctagcagtgcctcaatgccatacatgttttgttcttttcaagaacgaaga
agatcaactcctgctcctaaggaagaagagaaggtgaatgaagaacagtggtctctcaga
gaagttgtttttgtagaagatgttaaaaatgttccagttggaaaggtactgaaagttgat
ggcgcctatgtggcagtcaaatttcctggtgcatctaataattctaacaatcagggcacc
cctgtctgtgatccagacccatcctctctactacaggattgcagattactacggattgat
gaactacaggtagtgaaaactggggggacacccaaagtcccagactgtttccaaaggaca
cctaaaaagctttgcattccggaaaaaacggagatcctggcagtcaatgtagattccaaa
ggggttcatgctgtactgaaaacagggacgtgggtacgatactgtatctttgatcttgca
actggaaaagcagaacaggaaaacaacttcccaacaagtagcattgcatttcttggccag
aacgagagaaacgttgccatctttacagctgggcaggaatctcccatcattcttagagat
ggtaatggtaccatttatcctatggctaaagactgcatgggtggaataagagatccagac
tggcttgaccttcctccaataagcagtctcggaatgggagttcattctttaaccaatctc
cctgcaaattcaacaattaagaagaaagctgctattatcataatggctgttgagaagcaa
acattgatgcaacacattctgcgctgtgattatgaggcctgcaggcagtatttgatgaac
ctagagcaaggtatcgtcttggatccaaacactcagatgctgcagacttttctgagccac
cgatgtgatggcaataggaacatattgcatgcctgcgtgtccgtttgtttcccaacaagc
aacaaggaaacaaaagaagaggaggaagcagagcgctctgaaaggaatacgtttgcagaa
agactatctgcagtagaagcaattgccaatgctatctctgtggtttctagcaatggccct
ggaaatcgtgctggctcttccagcagtagaagcttgagattgagggaaatgatgaggcgg
tcccttcgggcagcaggtttggggagacatgaggctggcgcatctagtgatcaccaagac
ccagtatcacctcccattgcacctcctagctgggttcctgatccacctgctatggatcca
gatggtgacatcgattttatcctggctcctgctgtaggatcacttaccacggcatccact
gtacctggccaaggaccaagtacttctacaataccaggtccttcctctgagccatcagtt
gttgagtccaaggatcggaaggcaaacgctcacttcatactgaagttattatgtgatagc
attgttctgcagccttacctacgtgatctcctgtctgccaaggatgccagaggtatgact
ccttttatgtctgctgttagtgggagagcctatccagctgcaattaccattctggaaact
gcacagaaaattgctaaagctgaagcaaattcaagtgagaaagaggaggatattttcaag
ggaatgatatgtccacctggtacgaattcagacgactctcctctctatgtactttgctgc
aatgatacctgcagttttacatggacaggagctgagcatatcaaccaggacatatttgaa
tgtcgaacatgtggcttgttggaatccctgtgctgctgtactgagtgtgcaagagtctgc
cacaaaggtcacgactgcaaattgaaaagaacatcgcctactgcttactgtgactgttgg
gagaaatgcaaatgcaaaacattaattgccggacaaaagtctgcacgactagaccttctc
tatcgactgctgacaatcactaatcttgtcacaatgccaaacagcaggggagagcacctt
cttcttttcttagttcagactgtagccagacagacggtggaacactgccagtatcgacct
ccaagaattcgggaagatcgcaatcgaaagacagctaaccctgaagatactgatatgcca
gatcatgacctagagccccctaggtttgcacagcttgcactggaacgtgttttacaggat
tggaacgcacttaaatccatgattatgtttggttcccaagaaaataaagaccctcttagt
gctagcagtagaattggccatcttcttcctgaggaacaagtttatttgaaccagcagggt
ggtaccattcgcttggactgttttactcattgccttattgtcaagtgcacagcagatata
ttgctgttggataccttactggggacccttgtaaaggaactccaaaataaatatacgcct
gggcgtagagaagaagctgtagctgtcacaatgcgttttctgcgttcggtggctcgtgtt
tttgtcattctcagtgtagagatggcttcatccaagaagaaaaacaacttcattccacag
ccaatagggaaatgcaaaagagtgttccaagctttacttccatatgcagtggaggagttg
tgcaatgttgcagaatccctcattgtcccagtgagaatgggcattgcacgaccaactgcc
ccctttacactagcaagcacaagtatagatgctatgcagggcagcgaggagctgttctct
gtcgagcctctacctccaagaccttcatccgatcagtcgaacagttcgaatcagtcccag
tcatcctatatcattaggaatcctcagcaaagaagaataagccagtcccagcctgtacga
ggccgcgatgaagagcaggacgacattgtgtcagcggatgtggaagaggttgaagtggta
gagggggtagctggagaagaggaccaccatgatgagcaggaagagcacggggaagagaat
acagaagcggaaggacaacatgatgagcacgatgaagatgggagtgatatggagttagac
cttttggctgcagcggaaacagagagtgacagtgaaagtaaccacagcaatcaagataat
gccagtggtcggaggagtgtagtaacagcagctactgctggatccgaagcaggtgccagc
agtgttccagcctttttctctgaagatgactcccaatccaatgactccagtgattctgat
agcagtagcagtcaaagtgatgacctcgaccaggagacctttatgattgatgaacctcta
gagaggtcatcaaacagcaatcatgcaaacggggctgcccaggctccaagatcaatgcag
tgggcagtacggaacactcagagccaaagagccccaaacaccacaccatctaatacttct
actccagcagcaagttctggtgccttgatttacattgaaccatcaagtctgaggcggagt
ggcaacatgagctccagtgcagcagcaacagcagcagcccttgaagcaagcaattccagc
agttatttaacatcagcaagcagtctggctagagcctacagcattgtgatacggcagatc
tctgacctgatgggactaatccccaagtataaccacttggtctattcgcagatcccagca
gctgtaaagctaacctatcaagatgcagttaacttgcagaactatgttgaagaaaaactc
attcccacatggaactggatggtcagcataatggactcgactgaagcccagctgcgttat
gggtctgcgttagcatcagctggcgatccaggtcatcccagtcacccccttcatgcatct
cagaactccaaccgcagggaaaggatgactgcccgtgaggaagctagtttgaggactctt
gagggaagaagaagagccacactgcttagtgctcgacaggggatgtctgcacgcggagac
ttcctgaactatgcactttcactaatgcgctcgcacaatgacgaacactcggatgtgctt
cctgttttggatgtttgctccctgaagcacgtggcctatgtttttcaggctctgatatac
tggattaaggcaatgaaccaacagactacattagacactccacaactagaaagaaaaaga
acaagagagcttttggagcttggccttgataatgaagattcagagcatgaaaatgatgac
gacacaaatcaaagcctgacattaaatgacaaagatgatgatacgctaccctccgagact
ggtccaaatcatccgtttttccatcgctctgattcaatgacgttccttgggtgtattcca
ccaaacccatttgaagtttctctggcagaagctatcccacttgcagaccagccccatctt
ttgcagccaaatgcaaggaaggaagacttatttggtagaccaagtcaaggtctctactca
tctactgctaacactggaaaatgcctattagaagtgacagttgacagaaattgcctggag
gttttaccaaccaaaatgtcatatgctgctaatctaaaaaatgtaatgaacatacagagc
cgtcagaaagaagctgaggaacagaatgtgccgactgaggaaaatgaaacatcgaagcct
ggaccctctgctcacgatcttgcagctcagctgaagagtagcttgttggcagaaataggg
ttaactgagagtgaagggcctccactaacatcattcagaccacagtgtagctttatgggg
atggtaatttcccatgatatgctattaggacgttggcgactatcacttgaattgtttgga
cgggtcttcatggaagatgttggggcagagcctggatcaattttaactgaactaggaggt
tttgaagtaaaggaatccaagttccgtagggagatggaaaaacttcgaaatcagcagtcc
agagatttaacactagaggttgatcgggatagagaccttctaatacagcaaacaatgagg
cagctgaataatcattttgggcgcagatgcgccacaactcctatggcggtgcacagagta
aaggttacctttaaggatgagccaggagaaggcagtggtgtagcccgaagtttttacact
gcagtagcacaagcatttttgtccaatgaaaagctgccaagcttggactgtatccaaaat
gccaacaaaggtactcatacaagtttgatgcaaagactgagaaatcgaggggaacgagac
cgggaaagggagcgagacatgagaagaagcagtggtctgcgaacaggttctcggcgggat
agagacagagatttcagacgtcaactttccattgataccagacctttccggccagcttct
gagggcaatcctagtgatgatcctgatcctcttcctgctcacagacaggctctcggagag
agactatacccacgtgtacaagccatgcagccggcatttgcaagtaaaattacgggcatg
ctgcttgagctgtctcctgcacagctactgctgcttcttgcaagtgaagactccctaaga
gccagggtggatgaagctatggaacttatcattgcacatggaagggaaaatggtgctgac
agtatcctcgatttaggtttattagaagcagccgataaagtgcaggaaaaccgtaagagg
catggctctagtcgaagtgtggtcgatatggaactaacggatacagacgatggggacgat
aatgctcctttattttaccaacctggcaaacgaggtttttatagtcccaggcctggcaaa
aatacagaggcgaggttaaactgtttccgaaacatcggcagaattcttggcctgtgccta
ctacagaatgaattatgtcctatcactttaagtaggcaggtgattaaagtgcttctgggc
agaaaagtgaactggcatgattttgcattctttgatcatgtgatgtacgagagcttacgg
caacttatactcgcctcccaaagtccggatgccgacgcagtgtttgcctcaatggattta
gcgtttgcaatagacctttgcaaagaagaaagtggtgggcaagtggaactgattcctaat
ggtgtaaatatccctgtaacgcctcaaaatgtgtatgaatatgtcaggaaatacgctgaa
cacagaatgctcactgtagcagagcaaccacttaatgccatgaggaaaggactattggat
gttctcccaaagaatgcgttggaagacttaactgcagaagactttaggctcttggtgaat
ggctgcggggaagtcaatgttcagatgctcattagctttacctccttcaacgatgagtct
ggagaaaatgcagaaaagcttttgcagttcaaacgctggttctggtctatagtagaaaag
atgagcatgacagagaggcaagatttagtttatttttggacctccagcccatcgttgccg
gcaagtgaagagggattccaaccaatgccatccattaccatccggccacccgatgaccag
caccttcccacagcaaacacttgcatctctcgcctctacgtccccctttattcttcaaaa
cagattctcaaacagaagttgttactcgctattaagaccaagaactttggctttgtgtaa
DBGET
integrated database retrieval system
