Xenopus laevis (African clawed frog): 108719393
Help
Entry
108719393 CDS
T01010
Symbol
trpv4l.1.L
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108719393 (trpv4l.1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108719393 (trpv4l.1.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108719393 (trpv4l.1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
108719393
NCBI-ProteinID:
XP_018123716
Xenbase:
XB-GENE-22066241
UniProt:
A0A974CRM0
A0A8J0VKH9
LinkDB
All DBs
Position
6L:148804527..148874492
Genome browser
AA seq
920 aa
AA seq
DB search
MARPLDFLNSDPFVDTDDFQGNDVPDPINNVLLSSPTIVFANEEGAKPSYKIQCKCLVEM
DTKYENLNQYVNAPGKKLWTRFNSKMIQNDDFQGNGVPDPINNVLPSSPTIVFGNEEDTD
IYESEFGLSEYLAEMDTKYENVTQYVNAPGKTLWTRFNSKMIQNDDFQGNGVPDPINNVL
PSSPTIVFENEEDTDPSYEMECKCLVEMDTKYENLTLPNSPHPGHLPVVQKFDRKILFNI
VSRGCTAELEALLPFLLHENKKLTDEEFLDEKTKKTCLSKALMNLNKDKNYTIPVLIDIA
EITGNLQEFIDSPFNDYYDGQTALHIAIERRCIHYVELLVEKGANVHAQACGLFFQPKDE
GGYFYFGELPLSLAACTNQTDIVDYLTQNCHNKADLCHQDSRGNTVLHALVAIADNTPEN
TKFVTEMYDLLVIKCAKLYNGRSLEDILNNDKMSPLMMAAKLGKTEIFQHIIQLEIKDEE
ARHLSRKFRDWTYGPVYSSLYDLTRLDTYGEEVSVLEILAYKSTAENRHEMLAVEPINEL
LKEKWKKFGAVSFYLSFIAYIITMIIFTLISYYRPMEGTPPYPYTTTMDNMRLVGEIIIL
LTGIVFLIANMREIYVKKYPGLKFLFTDGCFQLLIFIYSVLVIITAALYLAGVEAYLAVM
VIALVLGWINALYFTRGLKLTGMYSVMLQKILLKDLLRFLLVYLLFLIGYASALVSLLNP
CTNEEICNSQENCTVSENPSCQHSITFSKLMLNLFTLTIGMGDLEMINHAKYPAVFIILM
ASYIIITFVLLLNMLIALMGETVGDVSKESKQIWQLQWATTILDIERYLPAFMKKAFRSG
EMVTVGKKVNGDPHERWCFRVDEVNWSHWKQDIAIINEDPGRSNLQIVGKHKAGQHSEDV
MVLLEKLPQSQTDEKNKKDY
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacctctggacttcttaaactctgatccatttgtggacactgatgatttccaa
gggaatgatgtccctgatcctatcaacaatgttttgctatcatctcccacaattgtgttt
gccaatgaggaaggtgcaaaacccagttataagatacaatgtaaatgtttagttgaaatg
gacaccaagtatgaaaaccttaaccaatatgttaatgctccaggaaaaaaactttggacc
agattcaattccaaaatgatccaaaatgatgattttcaagggaatggtgtccctgatcct
atcaacaatgtgttgccatcatctcccacaattgtgtttggaaatgaggaagatacagac
atttatgagtcagaatttggcctcagtgaatatttagctgaaatggacaccaagtatgaa
aacgttacccaatatgttaatgctccaggaaaaacactttggaccagattcaattccaaa
atgatccaaaatgatgattttcaagggaatggtgtccctgatcctatcaacaatgtgttg
ccatcatctcccacaattgtgtttgaaaatgaggaagatacagaccccagttatgagatg
gaatgtaaatgtttagttgaaatggacaccaagtatgaaaaccttaccctgcctaacagc
ccacatcctggccatctgcctgtcgttcaaaagtttgataggaaaatcctttttaatatt
gtctcaagaggttgcacggcagaactggaggcactcctgcctttcttgttacatgagaac
aagaaactgacagatgaagaatttctagatgaaaagacaaaaaagacttgtttatccaaa
gctctaatgaatctcaacaaagacaaaaattacacaatcccagtgcttatcgacattgca
gaaataactggaaatctgcaggaatttattgactcacccttcaatgattattacgatggc
caaactgctcttcacatagccattgagaggcgctgtatacattatgttgagttgctggta
gagaagggagctaatgttcatgctcaggcctgtggacttttctttcaacccaaggatgaa
ggaggatacttctactttggtgaacttcccctctcccttgccgcttgcaccaaccaaact
gatatcgtggactatttaacacagaattgtcataataaggcagatttatgtcatcaggat
tcacggggtaatacagttctgcacgctttggtcgctatagcagacaatacaccagaaaac
accaaatttgtcactgagatgtacgatcttttggtcattaaatgtgcaaagctgtacaat
ggccgtagcttggaggacatcctcaacaatgataaaatgtcacctctcatgatggcagcc
aaactgggaaaaacagagatattccaacatataatccagcttgaaataaaagatgaagaa
gctcgacatctctcacggaagttccgggattggacatatggccctgtttattcttcactt
tatgacttgactaggttggatacctatggcgaagaggtttccgtgcttgaaatactggct
tataagagtacagctgagaaccgccatgagatgctggcggtggagcccataaatgaacta
ttaaaagaaaagtggaagaagtttggtgctgtttctttctacctcagttttattgcctac
attattaccatgatcatcttcacattaatttcatattaccgacccatggaaggcacgccc
ccttacccatacacaactacaatggacaacatgcggcttgtgggagagatcattattctg
ctgactgggatagtctttctcattgctaatatgagagagatttatgtgaagaaataccct
ggactgaaatttctatttacagatggatgcttccagctacttatcttcatctactctgtg
ctggtcattatcacagcggctctgtaccttgctggtgttgaagcttacctggccgttatg
gtgattgccctggtcctggggtggataaatgctttatattttacaagaggcttgaagctc
actgggatgtacagtgttatgcttcagaagatcctgttaaaagatttgcttcgctttctg
ttggtgtacctgctgtttctcattggatatgcatcagctttggtatctttgctgaatccc
tgcaccaatgaggagatatgcaatagtcaagaaaattgtactgtttcagaaaatccttcc
tgtcaacacagcatcacattcagcaaattaatgcttaacctcttcacattgaccattggg
atgggagaccttgagatgatcaaccatgccaaataccctgccgtcttcatcattctaatg
gcatcatacattatcatcacctttgttctcctccttaacatgttaattgctttaatgggg
gagactgttggtgatgtgtccaaggaaagcaaacagatctggcaactgcagtgggccacc
acaatcctagatatagagagatatcttccagcctttatgaagaaagccttccgctctgga
gaaatggtaactgttggaaagaaagtgaatggggacccacatgaacgctggtgttttagg
gttgacgaggtgaactggtcccactggaaacaggatattgccattattaatgaggatcct
ggaaggagcaacttacagatcgtggggaagcataaagctggccaacattcagaagatgtt
atggtgcttcttgaaaaattgccacaatcccagactgatgagaagaacaagaaggattac
tga
DBGET
integrated database retrieval system
