Xenopus laevis (African clawed frog): 108719456
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Entry
108719456 CDS
T01010
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
108719456
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108719456
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Topoisomerases
108719456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
108719456
NCBI-ProteinID:
XP_018123795
UniProt:
A0A1L8G0C9
A0A974HGL8
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All DBs
Position
6L:complement(160860316..160903538)
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AA seq
1129 aa
AA seq
DB search
MAADDAQTVHRRGDEPKSRGHKEKGHSKAEPPKLNSNSLVRDETISSTGPPAEDPPRRKK
HRLEKSGKAKSADSSKKVKSPDPNTESDTEEPLPKHKKAENTFTEKLLQDSVISSAPDNG
MYKSVEPSDVSKEMASEVTTRLDENSNITAMECNGEVALYKKDEGVEPQCQTSKKEPSEE
SSSDEFQVGEEKHIDGQRNQVSLSASSQGEFSGISNSADIGVKVDPSFSKDNITIQEHEW
AKPEKETDRHNKAKKEEADRLERKKERAEKKGNSEKKEKGKNHLNRGSEKESVKKGKENK
DSRSENSTDGNEGISQVIQSEREKICEEMLASGEEREFADERKTDQRDPLKSKDDKSGGE
KKKSKKHSHKEKSKEKKRTGDMMEDAKVSVNRDHHRKDHVLEGKAEASEAVKLERSDVTI
GELSGAADEKVHLRVKSFEEELDELVNLKRPSNKVKKKEREVKNEEKKEKTTSDTAEGKV
TKGDDEEEEEEEKEELRAKKAKPEAKKNQKEEKIKVKGEKSAQGDAKDKATTDKKSSSRK
RKSTETNGTKAKNAKEAAKKEEEESKWKWWEEDHYEDGVKWKFLEHKGPYFAPPYEPLPD
DVTFYYDGKPVKLSPGAEEVATFYGKMLDHEYATKEAFQKNFFVDWREQMTSEEQKLIKH
LHKCDFSEIHKYFFDRNEARKALPKEEKQKLKEESNKIQEEYGFCILDGHREKIGNFKIE
PPGLFRGRGDHPKMGMLKLRIMPEDVIINCSKESKIPEPPTGHKWKEIRSDNTVTWLASW
TENIQSSIKYIMLNPSSKLKGEKDWQKYETARQLKGVVSDIRAQYRVDWKSREMKKRQRA
VALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIQLYPELDGQQYMVEFDFLGKDSIR
YYNKVPVEKEVFKNLKLFMENKNPDDDLFDRLNTTILNKHLQDLMDGLTAKVFRTYNASI
TLQNQLKELTNGEDNVAAKILSYNRANRAVALLCNHQRALPKTFEKSMQNLQTKIDAKEQ
QLKEAKKELKSAKADYKAKKNEKSKKELEKKKKQFARIEEQLMKLKLQATDKEENKQIAL
GTSKLNYLDPRISVAWCKKYGVPIEKIYNKTQRDKFAWAIDMTSEEFEF
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgatgatgctcagactgtccatcgccggggggacgaacccaaatcgaggggc
cacaaggagaagggccacagtaaagctgaaccccctaaactgaacagcaacagcctagtc
agggatgagaccatatcttccaccggcccccctgctgaggatcctcccaggaggaagaag
caccgactggagaagtcaggaaaggccaaatctgccgacagttcaaagaaagtcaaatct
cccgaccccaacacagaaagtgatacagaggagcctctgcccaaacacaaaaaggcagaa
aataccttcacagaaaagctgctgcaggacagtgtgattagcagtgccccagacaatggg
atgtataaatcagtggaaccaagtgacgtcagtaaggagatggcttccgaagtcaccaca
cgattggatgagaacagcaacatcactgcaatggagtgcaatggggaagttgcactgtac
aagaaggatgagggggtggaaccccaatgccaaaccagtaaaaaggaacccagtgaggaa
agttctagtgatgaatttcaggttggagaagagaaacacatagatggtcaaaggaaccaa
gtctctctatctgccagctcccaaggagagttcagtgggatatctaactctgcagatatt
ggggtgaaagtggacccctccttcagtaaagataacataactatacaggaacatgaatgg
gcaaaaccagagaaggagacagaccgccataacaaagccaaaaaggaggaagctgatagg
ttggagaggaaaaaggagcgtgcagagaaaaaggggaattcagagaagaaggaaaagggg
aaaaatcatttgaatagaggttcagagaaagaaagtgtaaaaaagggtaaggaaaacaag
gattctagaagcgagaattccaccgatggaaatgaaggcatcagccaagtcatccagtct
gaaagagagaagatatgtgaagaaatgttggcatcaggggaagagcgagaatttgcagac
gaaaggaaaactgatcagagagaccccctgaaatccaaagatgataaatctggtggggag
aagaaaaagtcaaaaaagcattctcacaaagagaagtccaaagagaagaagagaacagga
gacatgatggaagatgccaaagtgtcagtgaatcgtgaccatcacaggaaggaccatgtc
ctggagggaaaagcagaggccagcgaggcagtaaaactagagagaagtgatgtgactatt
ggggaactcagtggagcagcagatgagaaggtccatctgagagtgaaaagctttgaggag
gaactagatgagttggtgaatttaaaaaggccgagcaataaagtcaagaagaaggaaagg
gaagtgaagaacgaggagaagaaagagaagactaccagcgacacggccgaaggcaaagtt
acaaaaggggatgatgaggaggaggaggaagaagagaaggaggaattgagggccaagaaa
gccaaacctgaggcaaaaaagaatcagaaagaggagaagatcaaagtgaaaggggaaaaa
agtgcccaaggtgatgccaaggacaaggccacaactgacaaaaagtcctcgtctcggaaa
cggaaaagtactgaaaccaatgggaccaaagccaaaaatgctaaagaggcggccaaaaag
gaagaagaagaatcaaagtggaaatggtgggaggaagatcactatgaggacggtgtgaag
tggaaattcctggaacacaagggcccgtattttgcccccccgtatgagcccctccctgat
gatgtcacattctactatgatgggaagcctgtgaaactgagcccgggggctgaggaagtg
gccactttctatggcaaaatgctggaccatgagtatgccaccaaagaggcgtttcagaag
aacttctttgtagactggagagagcaaatgaccagtgaggagcagaagctgatcaagcat
ctacacaagtgcgatttctctgagatccacaagtatttctttgataggaatgaggcccgc
aaggctttgcccaaggaagagaaacagaaactgaaagaggaatctaataagatccaggag
gagtacggcttctgcattctggatgggcacagggaaaaaatcggaaacttcaagattgag
ccccctggactgttcagaggccgtggggaccacccgaagatgggaatgctaaagctgagg
atcatgcctgaggatgtgattatcaactgcagcaaagaatccaagattccagagccccct
actgggcacaagtggaaagagatccggtctgataatacggtgacttggctagcgtcatgg
actgaaaatattcagagttcaatcaagtacatcatgttaaacccaagctccaagctcaag
ggagagaaggactggcagaaatatgaaaccgctcggcaactgaaaggggtagtgagtgac
atcagagctcagtatcgggtggactggaaatccagggagatgaagaaacggcaaagagct
gtggccctgtatttcattgataagctggcactccgagcgggaaatgagaaggaggaaggg
gagacggcagatacagtgggctgctgttccctaagggtagagcacatacagctgtaccca
gagctcgatggacaacagtacatggtggagtttgacttcctggggaaggattccatccgc
tattataacaaggtgccagtggagaaggaggttttcaagaatctcaagcttttcatggag
aataaaaacccagatgatgatctgtttgacagactgaatactaccatactgaacaaacat
ctacaggatctgatggacggactgacagccaaagtcttccgaacctacaatgcttccatc
accctgcaaaaccagctgaaggagctgaccaatggggaagacaacgtagcagccaagatt
ttgtcttataatcgggcaaaccgagctgtagctcttctctgtaaccaccagagggcactc
ccaaaaacctttgaaaagtcaatgcagaatctacagactaagattgatgcaaaggaacag
caactgaaagaagcaaagaaagagttaaagagtgcaaaggccgactataaagccaagaaa
aacgagaagtcgaagaaggaattggagaagaagaagaagcagtttgcaaggatagaggag
cagctgatgaagctgaagctacaggccacagataaagaggagaataagcagattgccctt
ggcacgtccaaactcaactatctggatccccgtatttctgttgcctggtgcaagaagtat
ggggtgcccattgagaagatctataacaagacacagagagataaattcgcctgggccata
gacatgaccagtgaggagtttgagttctaa
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